Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 5.5e-72 274.2 144 100.0
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 3.0e-54 215.3 145 83.4
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 3.0e-49 198.7 146 78.1
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 9.2e-43 177.2 141 74.5
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 2.0e-37 159.5 138 66.7
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 5.8e-37 157.9 143 69.2
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 2.4e-35 152.5 143 67.1
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 1.8e-30 136.3 127 63.8
Lalb_Chr12g0201261 Lupinus albus HOM05D013104 ORTHO05D010857 3.9e-25 118.6 150 54.0
arahy.Tifrunner.gnm1.ann1.ABZM2I Arachis hypogaea HOM05D013104 ORTHO05D010857 1.1e-24 117.1 159 54.1
Lalb_Chr07g0182451 Lupinus albus HOM05D013104 ORTHO05D010857 1.5e-21 106.7 143 50.3
arahy.Tifrunner.gnm1.ann1.984SQ9 Arachis hypogaea HOM05D013104 ORTHO05D010857 3.9e-17 92.0 143 50.3
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.4e-14 83.6 133 40.6
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 6.4e-12 74.7 137 37.2
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 2.1e-10 69.7 132 40.2
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 2.7e-10 69.3 132 40.2
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 3.5e-10 68.9 134 37.3
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 1.8e-09 66.6 137 36.5
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.8e-09 66.6 137 37.2
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 3.0e-09 65.9 130 37.7
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 3.9e-09 65.5 138 32.6
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 5.1e-09 65.1 138 37.7
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 6.7e-09 64.7 133 41.4
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 8.7e-09 64.3 137 39.4
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 1.9e-08 63.2 133 37.6
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.5e-08 62.8 130 37.7
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 3.3e-08 62.4 138 31.9
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.6e-07 60.1 138 32.6
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 2.8e-07 59.3 134 38.1
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 1.4e-06 57.0 133 36.1
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 3.1e-06 55.8 133 32.3
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 4.0e-06 55.5 149 34.9
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 6.9e-06 54.7 137 30.7
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 9.0e-06 54.3 129 34.9


User provided reference genes

Program Settings