Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G384 Trifolium pratense HOM05D010190 ORTHO05D010933 1.5e-52 209.1 97 100.0
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 5.8e-17 90.9 96 51.0
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 9.3e-15 83.6 95 49.5
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 1.3e-11 73.2 86 47.7
Nitab4.5_0001761g0030 Nicotiana tabacum HOM05D008931 ORTHO05D010933 1.8e-10 69.3 36 80.6
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.5e-09 66.2 59 59.3
Peaxi162Scf00608g00016 Petunia axillaris HOM05D000680 ORTHO05D005619 5.9e-09 64.3 37 78.4
Nitab4.5_0012234g0070 Nicotiana tabacum HOM05D008931 ORTHO05D010933 1.3e-08 63.2 36 75.0
arahy.Tifrunner.gnm1.ann1.XUIM66 Arachis hypogaea HOM05D007952 ORTHO05D009823 2.2e-08 62.4 35 80.0
Lsat_1_v5_gn_2_20561 Lactuca sativa HOM05D010488 ORTHO05D011667 3.8e-08 61.6 59 59.3
Nitab4.5_0001170g0050 Nicotiana tabacum HOM05D010190 ORTHO05D011667 3.8e-08 61.6 59 54.2
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 3.8e-08 61.6 96 38.5
Nitab4.5_0005637g0050 Nicotiana tabacum HOM05D011380 ORTHO05D016005 6.5e-08 60.8 36 72.2
arahy.Tifrunner.gnm1.ann1.840LER Arachis hypogaea HOM05D000533 ORTHO05D002807 1.9e-07 59.3 35 77.1
Oeu022560.1 Olea europaea HOM05D007952 ORTHO05D009823 1.2e-06 56.6 29 82.8
PGSC0003DMG400028997 Solanum tuberosum HOM05D007952 ORTHO05D009823 1.2e-06 56.6 29 82.8
CAN.G2251.1 Capsicum annuum HOM05D010190 ORTHO05D011667 1.6e-06 56.2 37 67.6
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.1e-06 55.8 36 66.7
TAR626G1139 Trochodendron aralioides HOM05D000301 ORTHO05D000303 2.1e-06 55.8 35 71.4
SEGI_20804 Sequoiadendron giganteum HOM05D007952 ORTHO05D009823 6.1e-06 54.3 35 68.6
arahy.Tifrunner.gnm1.ann1.8WK9L8 Arachis hypogaea HOM05D020811 ORTHO05D018485 7.9e-06 53.9 35 68.6
Solyc11g044640.1 Solanum lycopersicum HOM05D008931 ORTHO05D018485 7.9e-06 53.9 36 63.9


User provided reference genes

Program Settings