Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38395 Trifolium pratense HOM05D009527 ORTHO05D013850 3.3e-161 571.6 283 100.0
TPR.G32057 Trifolium pratense HOM05D061576 ORTHO05D412474 6.0e-30 135.6 117 62.4
Medtr1g115165 Medicago truncatula HOM05D009527 ORTHO05D013850 4.5e-17 92.8 77 53.2
Medtr6g007360 Medicago truncatula HOM05D009527 ORTHO05D013850 4.5e-17 92.8 77 53.2
Medtr4g078180 Medicago truncatula HOM05D009527 ORTHO05D013850 5.9e-17 92.4 77 53.2
TPR.G26515 Trifolium pratense HOM05D009527 ORTHO05D013850 3.8e-16 89.7 73 49.3
Ca_27173_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 5.0e-16 89.4 69 53.6
TPR.G18519 Trifolium pratense HOM05D009527 ORTHO05D013850 8.5e-16 88.6 74 51.4
TPR.G8499 Trifolium pratense HOM05D028375 ORTHO05D008640 4.2e-15 86.3 74 50.0
TPR.G27263 Trifolium pratense HOM05D009527 ORTHO05D013850 5.5e-15 85.9 74 50.0
TPR.G36084 Trifolium pratense HOM05D009527 ORTHO05D013850 7.2e-15 85.5 200 30.5
Ca_25152_v3 Cicer arietinum L. HOM05D002770 ORTHO05D003011 9.4e-15 85.1 174 29.9
TPR.G34991 Trifolium pratense HOM05D009527 ORTHO05D013850 2.7e-14 83.6 195 31.8
TPR.G34485 Trifolium pratense HOM05D009527 ORTHO05D013850 1.0e-13 81.6 197 32.5
Ca_16686_v3 Cicer arietinum L. HOM05D009527 ORTHO05D013850 5.7e-12 75.9 82 46.3
TPR.G31959 Trifolium pratense HOM05D061576 ORTHO05D006775 3.7e-11 73.2 106 43.4
Ca_12972_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 1.4e-10 71.2 69 44.9
VMungo0647G1598 Vigna mungo HOM05D002051 ORTHO05D002041 2.4e-10 70.5 120 30.0
VMungo1383G3216 Vigna mungo HOM05D001447 ORTHO05D010195 6.9e-10 68.9 75 44.0
Ca_19227_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.2e-09 68.2 69 43.5
VMungo0251G2087 Vigna mungo HOM05D009527 ORTHO05D010195 1.2e-09 68.2 73 42.5
Ca_13622_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.0e-09 67.4 69 44.9
VMungo0251G0994 Vigna mungo HOM05D002797 ORTHO05D010195 2.0e-09 67.4 75 42.7
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 2.6e-09 67.0 69 43.5
VMungo0464G0875 Vigna mungo HOM05D003387 ORTHO05D005400 3.4e-09 66.6 100 34.0
VMungo0331G1288 Vigna mungo HOM05D004910 ORTHO05D010195 5.9e-09 65.9 100 33.0
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 5.9e-09 65.9 70 42.9
VMungo1080G1902 Vigna mungo HOM05D000054 ORTHO05D010195 5.9e-09 65.9 75 38.7
VMungo0251G0341 Vigna mungo HOM05D000660 ORTHO05D010195 7.7e-09 65.5 85 36.5
Ca_22822_v3 Cicer arietinum L. HOM05D003606 ORTHO05D000002 1.0e-08 65.1 70 40.0
Psat0s1287g0080 Pisum sativum HOM05D000004 ORTHO05D000002 1.0e-08 65.1 71 36.6
Ca_12309_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-08 64.7 70 40.0
Ca_19490_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.3e-08 64.7 70 38.6
Ca_25971_v3 Cicer arietinum L. HOM05D001297 ORTHO05D001135 1.3e-08 64.7 69 42.0
Psat7g152800 Pisum sativum HOM05D000004 ORTHO05D000002 1.7e-08 64.3 68 38.2
VMungo0720G0600 Vigna mungo HOM05D001082 ORTHO05D010195 1.7e-08 64.3 94 35.1
Ca_03006_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.2e-08 63.9 67 44.8
Ca_07639_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.2e-08 63.9 70 38.6
Medtr7g446320 Medicago truncatula HOM05D009527 ORTHO05D013850 2.2e-08 63.9 50 54.0
Psat5g016360 Pisum sativum HOM05D000004 ORTHO05D000002 2.2e-08 63.9 67 38.8
Medtr3g022250 Medicago truncatula HOM05D009527 ORTHO05D013850 2.9e-08 63.5 74 40.5
Ca_12602_v3 Cicer arietinum L. HOM05D000836 ORTHO05D000002 3.8e-08 63.2 70 35.7
TWI15G0520 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 3.8e-08 63.2 75 37.3
VMungo1383G1168 Vigna mungo HOM05D000140 ORTHO05D010195 3.8e-08 63.2 103 36.9
VMungo1383G1247 Vigna mungo HOM05D000402 ORTHO05D010195 3.8e-08 63.2 68 44.1
Ca_16129_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 5.0e-08 62.8 77 32.5
Ca_05816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 6.5e-08 62.4 72 43.1
VMungo0647G0036 Vigna mungo HOM05D001600 ORTHO05D001502 6.5e-08 62.4 69 39.1
TPR.G6695 Trifolium pratense HOM05D000004 ORTHO05D000002 8.5e-08 62.0 70 34.3
CAN.G824.35 Capsicum annuum HOM05D000004 ORTHO05D000002 1.1e-07 61.6 79 32.9
CAN.G845.6 Capsicum annuum HOM05D000004 ORTHO05D000002 1.1e-07 61.6 79 32.9
VMungo0331G1449 Vigna mungo HOM05D009527 ORTHO05D010195 1.1e-07 61.6 76 39.5
VMungo0647G0580 Vigna mungo HOM05D000660 ORTHO05D010195 1.1e-07 61.6 112 31.2
Ca_10432_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.4e-07 61.2 70 37.1
Ca_11127_v3 Cicer arietinum L. HOM05D001650 ORTHO05D001592 1.4e-07 61.2 70 37.1
Ca_27450_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.9e-07 60.8 70 37.1
ECA234G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.9e-07 60.8 70 37.1
Ca_12559_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 2.5e-07 60.5 70 35.7
Ca_12976_v3 Cicer arietinum L. HOM05D003122 ORTHO05D012218 3.2e-07 60.1 69 39.1
VMungo1383G0727 Vigna mungo HOM05D000250 ORTHO05D002850 3.2e-07 60.1 71 36.6
Ca_27463_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 4.2e-07 59.7 69 42.0
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 4.2e-07 59.7 69 40.6
VMungo1127G2266 Vigna mungo HOM05D009527 ORTHO05D010195 4.2e-07 59.7 101 33.7
Psat5g213280 Pisum sativum HOM05D000004 ORTHO05D000002 5.5e-07 59.3 70 38.6
VMungo0464G0549 Vigna mungo HOM05D001615 ORTHO05D001493 5.5e-07 59.3 68 39.7
VMungo0720G2490 Vigna mungo HOM05D012939 ORTHO05D010195 5.5e-07 59.3 91 36.3
Ca_12969_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.2e-07 58.9 70 34.3
Ca_16100_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 7.2e-07 58.9 82 31.7
Ca_23810_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.2e-07 58.9 72 40.3
VMungo0464G1208 Vigna mungo HOM05D000004 ORTHO05D000002 7.2e-07 58.9 71 39.4
VMungo0720G0378 Vigna mungo HOM05D012939 ORTHO05D010195 7.2e-07 58.9 71 40.8
Ca_20328_v3 Cicer arietinum L. HOM05D000004 ORTHO05D010195 9.4e-07 58.5 86 37.2
QL10p040115 Quercus lobata HOM05D000004 ORTHO05D000002 9.4e-07 58.5 105 32.4
TPR.G20516 Trifolium pratense HOM05D003122 ORTHO05D000002 9.4e-07 58.5 75 42.7
Ca_08465_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-06 58.2 70 34.3
Ca_12127_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-06 58.2 74 39.2
Ca_20427_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.2e-06 58.2 70 35.7
Ca_20797_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 1.2e-06 58.2 66 39.4
TPR.G17488 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-06 58.2 70 35.7
TPR.G9173 Trifolium pratense HOM05D000004 ORTHO05D000002 1.2e-06 58.2 71 32.4
Ca_04545_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.6e-06 57.8 80 30.0
Ca_07730_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 1.6e-06 57.8 80 30.0
VMungo1309G2709 Vigna mungo HOM05D000618 ORTHO05D010195 1.6e-06 57.8 117 34.2
Ca_12199_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.1e-06 57.4 72 38.9
Ca_22816_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 2.1e-06 57.4 66 37.9
Lalb_Chr12g0204601 Lupinus albus HOM05D003122 ORTHO05D000002 2.1e-06 57.4 75 40.0
Psat3g115000 Pisum sativum HOM05D003122 ORTHO05D000002 2.7e-06 57.0 106 38.7
Ca_05479_v3 Cicer arietinum L. HOM05D000004 ORTHO05D000002 3.6e-06 56.6 70 32.9
VMungo0540G2200 Vigna mungo HOM05D009527 ORTHO05D010195 3.6e-06 56.6 70 35.7
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 4.7e-06 56.2 73 35.6
Ca_10305_v3 Cicer arietinum L. HOM05D001134 ORTHO05D000002 4.7e-06 56.2 65 35.4
Psat3g172640 Pisum sativum HOM05D000028 ORTHO05D000390 4.7e-06 56.2 70 35.7
Psat4g137240 Pisum sativum HOM05D000004 ORTHO05D000002 4.7e-06 56.2 70 34.3
VMungo1127G0526 Vigna mungo HOM05D002312 ORTHO05D007981 4.7e-06 56.2 107 30.8
TPR.G31865 Trifolium pratense HOM05D000004 ORTHO05D000002 6.1e-06 55.8 70 34.3
Ca_01724_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 7.9e-06 55.5 72 40.3
Manes.03G138751 Manihot esculenta HOM05D000004 ORTHO05D000002 7.9e-06 55.5 72 38.9


User provided reference genes

Program Settings