Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38366 Trifolium pratense HOM05D003057 ORTHO05D003904 2.3e-216 755.4 403 100.0
Lj5g0003986 Lotus japonicus HOM05D003057 ORTHO05D003904 1.8e-88 330.5 388 46.9
Lj4g0012344 Lotus japonicus HOM05D003057 ORTHO05D003904 1.6e-76 290.8 420 39.5
Lj2g0002985 Lotus japonicus HOM05D003057 ORTHO05D003904 1.1e-74 284.6 420 39.3
TPR.G13641 Trifolium pratense HOM05D003057 ORTHO05D003904 2.0e-74 283.9 138 97.8
COL.COLO4_06022 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.7e-74 281.6 415 38.8
COL.COLO4_24961 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.7e-73 279.6 415 38.3
TPR.G1746 Trifolium pratense HOM05D003057 ORTHO05D003904 8.2e-73 278.5 419 39.4
COL.COLO4_22596 Corchorus olitorius HOM05D003057 ORTHO05D003904 3.6e-68 263.1 336 42.9
Rhsim05G0119600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.9e-67 259.6 424 36.8
COL.COLO4_37503 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.6e-66 256.9 382 39.5
Rhsim08G0118100 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.7e-66 255.8 424 36.6
RhsimUnG0099900 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.7e-66 255.8 424 36.6
ECA248G1006 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.4e-64 251.1 417 36.9
COL.COLO4_07828 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.8e-64 250.8 424 37.0
TPR.G34813 Trifolium pratense HOM05D003057 ORTHO05D003904 2.6e-63 246.9 399 39.1
Rhsim02G0047600 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.7e-62 244.2 422 36.7
COL.COLO4_10110 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-61 241.5 351 41.3
AL5G22340 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.5e-61 241.1 394 36.8
BcaC01g02975 Brassica carinata HOM05D003057 ORTHO05D003904 2.5e-61 240.4 408 34.8
COL.COLO4_08929 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.5e-61 239.2 418 35.4
Rhsim03G0157600 Rhododendron simsii HOM05D003057 ORTHO05D003904 7.2e-61 238.8 426 35.2
COL.COLO4_20007 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-60 238.0 418 35.2
COL.COLO4_37789 Corchorus olitorius HOM05D003057 ORTHO05D003904 2.1e-60 237.3 227 53.7
BcaC04g21929 Brassica carinata HOM05D003057 ORTHO05D003904 6.1e-60 235.7 382 36.6
RhsimUnG0046200 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.0e-60 235.3 263 45.6
RhsimUnG0227600 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.0e-60 235.3 413 34.1
Rhsim11G0159700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.4e-59 234.6 391 35.5
AL6G26450 Arabidopsis lyrata HOM05D003057 ORTHO05D003904 1.8e-59 234.2 414 35.3
Rhsim10G0170800 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.3e-59 233.8 263 45.2
SGA_v2.0_scaffold73G24256 Striga asiatica HOM05D003057 ORTHO05D003904 4.0e-59 233.0 422 33.9
PSO017G2586 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-57 227.3 423 33.6
PSO151G0074 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-57 227.3 425 33.9
PSO339G3716 Papaver somniferum HOM05D003057 ORTHO05D003904 3.7e-57 226.5 422 33.4
ECA234G4294 Erigeron canadensis HOM05D003057 ORTHO05D003904 6.3e-57 225.7 378 36.8
COL.COLO4_21501 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.8e-56 224.2 227 52.4
PSO210G2781 Papaver somniferum HOM05D003057 ORTHO05D003904 4.1e-56 223.0 422 33.4
PSO017G6481 Papaver somniferum HOM05D003057 ORTHO05D003904 5.3e-56 222.6 422 33.4
PSO832G2073 Papaver somniferum HOM05D003057 ORTHO05D003904 1.2e-55 221.5 422 33.6
Hma1.2p1_0622F.1_g190920 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 3.8e-54 216.5 387 33.3
PSO170G5731 Papaver somniferum HOM05D003057 ORTHO05D003904 3.2e-53 213.4 258 45.0
PSO724G1375 Papaver somniferum HOM05D003057 ORTHO05D003904 5.5e-53 212.6 408 33.6
PSO170G5304 Papaver somniferum HOM05D003057 ORTHO05D003904 7.2e-53 212.2 260 43.1
Rhsim01G0115600 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.6e-52 209.9 399 33.6
PSO384G2563 Papaver somniferum HOM05D003057 ORTHO05D003904 4.7e-52 209.5 421 31.8
Rhsim11G0002500 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.7e-52 209.5 236 47.9
PSO478G2060 Papaver somniferum HOM05D003057 ORTHO05D003904 6.1e-52 209.1 257 43.6
PSO017G5767 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-51 208.0 260 43.1
BcaC08g45994 Brassica carinata HOM05D003057 ORTHO05D003904 6.8e-51 205.7 237 46.4
COL.COLO4_20032 Corchorus olitorius HOM05D003057 ORTHO05D003904 8.8e-51 205.3 380 34.7
TWI15G0994 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 4.4e-50 203.0 255 43.1
PSO339G0276 Papaver somniferum HOM05D003057 ORTHO05D003904 2.2e-49 200.7 245 43.7
COL.COLO4_37543 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.8e-49 199.5 270 41.1
PSO761G0317 Papaver somniferum HOM05D003057 ORTHO05D003904 1.4e-48 198.0 409 32.0
PSO017G3866 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-47 194.1 227 44.9
PSO063G0536 Papaver somniferum HOM05D003057 ORTHO05D003904 2.7e-47 193.7 260 43.1
PSO357G0662 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-46 191.4 253 43.1
PSO761G0015 Papaver somniferum HOM05D003057 ORTHO05D003904 1.3e-46 191.4 260 42.3
TWI31G1500 Tripterygium wilfordii HOM05D003057 ORTHO05D003904 3.8e-46 189.9 343 35.3
Rhsim09G0063100 Rhododendron simsii HOM05D003057 ORTHO05D003904 5.0e-46 189.5 264 42.0
Rhsim02G0188400 Rhododendron simsii HOM05D003057 ORTHO05D003904 8.6e-46 188.7 232 43.1
COL.COLO4_27567 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.2e-45 186.4 299 37.8
Rhsim12G0027300 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.2e-45 186.4 368 33.2
Ah.15g097480 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.5e-45 186.0 402 31.6
PSO170G1938 Papaver somniferum HOM05D003057 ORTHO05D003904 5.5e-45 186.0 421 28.7
Ah.03g145610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.2e-45 185.7 402 31.3
ECA234G0491 Erigeron canadensis HOM05D003057 ORTHO05D003904 1.2e-44 184.9 225 44.9
RhsimUnG0134200 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-44 184.5 211 45.5
PSO339G2793 Papaver somniferum HOM05D003057 ORTHO05D003904 2.8e-44 183.7 358 35.5
Ah.13g068770 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-44 182.2 402 31.3
PSO170G6344 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-43 180.6 421 28.7
PSO384G4427 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-43 180.6 421 28.7
Ah.14g084280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.0e-43 180.3 402 30.6
Rhsim02G0188200 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.0e-43 179.9 347 34.6
COL.COLO4_09308 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.2e-43 179.5 219 45.2
PSO170G6610 Papaver somniferum HOM05D003057 ORTHO05D003904 5.2e-43 179.5 306 35.6
Ah.03g140530 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-42 177.6 402 30.3
Ah.07g201230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.4e-42 176.8 401 30.9
Ah.10g026650 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.4e-42 176.8 402 30.3
Ah.06g187260 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-41 174.5 402 30.1
PSO063G5105 Papaver somniferum HOM05D003057 ORTHO05D003904 1.7e-41 174.5 237 41.4
Rhsim07G0167300 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.7e-41 173.3 144 56.9
QL05p017993 Quercus lobata HOM05D003057 ORTHO05D003904 4.9e-41 172.9 263 38.4
PSO357G0652 Papaver somniferum HOM05D003057 ORTHO05D003904 3.1e-40 170.2 422 28.9
PSO675G7321 Papaver somniferum HOM05D003057 ORTHO05D003904 9.2e-40 168.7 208 42.8
CAN.G960.86 Capsicum annuum HOM05D003057 ORTHO05D003904 1.2e-39 168.3 225 40.0
Ah.07g202550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.0e-39 167.5 420 28.8
Ah.01g013430 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-38 165.2 414 28.7
Ah.07g202070 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.0e-38 165.2 261 35.6
Ah.07g196960 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.7e-38 164.5 420 28.6
QL01p049124 Quercus lobata HOM05D003057 ORTHO05D003904 1.7e-38 164.5 289 33.9
Ah.04g158790 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-38 163.7 420 28.6
Ah.03g142690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.8e-38 163.3 420 28.3
Ah.04g155590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.0e-38 162.9 410 28.3
PSO478G2424 Papaver somniferum HOM05D003057 ORTHO05D003904 5.0e-38 162.9 370 32.7
Rhsim09G0038900 Rhododendron simsii HOM05D009719 ORTHO05D003904 8.6e-38 162.2 142 54.9
TPR.G14789 Trifolium pratense HOM05D003057 ORTHO05D003904 8.6e-38 162.2 221 42.5
PSO013G0378 Papaver somniferum HOM05D003057 ORTHO05D003904 1.1e-37 161.8 298 34.6
Ah.13g069490 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.9e-37 161.0 420 28.3
PSO675G0308 Papaver somniferum HOM05D003057 ORTHO05D003904 3.3e-37 160.2 339 33.6
Rhsim11G0020100 Rhododendron simsii HOM05D003057 ORTHO05D003904 4.3e-37 159.8 129 59.7
Ah.04g162690 Amaranthus hybridus HOM05D003057 ORTHO05D003904 5.6e-37 159.5 422 28.0
Ah.06g181680 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.5e-37 158.7 422 27.7
Ah.06g184390 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.8e-36 157.1 410 27.1
PSO170G6652 Papaver somniferum HOM05D003057 ORTHO05D003904 4.7e-36 156.4 144 53.5
Ah.01g017940 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.0e-36 155.6 420 28.1
Ah.01g023980 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.8e-35 154.5 260 35.4
PSO339G6256 Papaver somniferum HOM05D003057 ORTHO05D003904 2.3e-35 154.1 260 35.4
PSO210G2682 Papaver somniferum HOM05D003057 ORTHO05D003904 3.0e-35 153.7 305 35.1
PSO384G0803 Papaver somniferum HOM05D003057 ORTHO05D003904 4.0e-35 153.3 394 29.4
TPR.G14797 Trifolium pratense HOM05D003057 ORTHO05D003904 4.0e-35 153.3 219 43.4
COL.COLO4_30277 Corchorus olitorius HOM05D003057 ORTHO05D003904 5.2e-35 152.9 292 37.0
PSO210G0544 Papaver somniferum HOM05D003057 ORTHO05D003904 5.2e-35 152.9 220 39.5
PSO017G4412 Papaver somniferum HOM05D003057 ORTHO05D003904 8.9e-35 152.1 335 31.6
PSO198G0152 Papaver somniferum HOM05D003057 ORTHO05D003904 1.5e-34 151.4 143 50.3
PSO017G7296 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-34 151.0 143 52.4
PSO832G1677 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-34 151.0 228 38.6
Ah.16g106200 Amaranthus hybridus HOM05D003057 ORTHO05D003904 9.8e-34 148.7 260 34.6
PSO675G8645 Papaver somniferum HOM05D003057 ORTHO05D003904 9.8e-34 148.7 271 34.3
SGA_v2.0_scaffold17G08157 Striga asiatica HOM05D003057 ORTHO05D003904 9.8e-34 148.7 241 35.3
Ah.10g032920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.9e-33 147.1 328 29.3
Ah.03g144340 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.7e-33 146.7 316 30.1
COL.COLO4_04492 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.1e-32 145.2 148 50.7
Ah.06g181160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-32 143.7 263 32.7
Ah.13g067120 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.2e-32 143.7 316 29.7
Ah.11g045640 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.1e-32 143.3 316 29.7
Ah.04g164590 Amaranthus hybridus HOM05D003057 ORTHO05D003904 7.0e-32 142.5 316 30.1
COL.COLO4_35241 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.2e-32 142.1 359 28.7
Ah.16g103350 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.6e-31 141.4 316 29.7
Ah.06g182610 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.5e-31 140.2 316 29.4
Ah.06g181920 Amaranthus hybridus HOM05D003057 ORTHO05D003904 4.6e-31 139.8 316 29.4
Ah.11g041830 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.0e-31 139.4 316 29.1
Ah.11g046560 Amaranthus hybridus HOM05D003057 ORTHO05D003904 6.0e-31 139.4 313 29.1
Ah.01g002160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.3e-30 138.3 263 31.9
Ah.03g143550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-30 137.5 263 32.7
Ah.07g201280 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-30 137.5 263 31.2
Ah.10g032220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 2.3e-30 137.5 263 31.6
Ah.05g175220 Amaranthus hybridus HOM05D003057 ORTHO05D003904 3.9e-30 136.7 328 28.0
Ah.07g206230 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-29 135.2 263 31.2
Ah.15g097160 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.1e-29 135.2 236 35.2
Hma1.2p1_1282F.1_g272710 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 1.1e-29 135.2 270 31.9
SGA_v2.0_scaffold16G07775 Striga asiatica HOM05D003057 ORTHO05D003904 1.1e-29 135.2 252 32.9
PSO339G0160 Papaver somniferum HOM05D003057 ORTHO05D003904 2.5e-29 134.0 234 38.5
Rhsim06G0137900 Rhododendron simsii HOM05D003057 ORTHO05D003904 3.6e-28 130.2 191 40.3
COL.COLO4_31045 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.2e-26 125.2 204 38.2
PSO832G3916 Papaver somniferum HOM05D003057 ORTHO05D003904 2.0e-26 124.4 121 52.9
PSO017G4793 Papaver somniferum HOM05D003057 ORTHO05D003904 3.4e-26 123.6 197 38.6
PSO339G3646 Papaver somniferum HOM05D003057 ORTHO05D003904 4.4e-26 123.2 240 31.7
PSO210G4431 Papaver somniferum HOM05D003057 ORTHO05D003904 2.9e-25 120.6 246 30.9
Psat0ss1860g0040 Pisum sativum HOM05D003057 ORTHO05D003904 1.6e-23 114.8 90 63.3
Rhsim01G0178000 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.6e-23 114.8 228 31.6
PSO170G4809 Papaver somniferum HOM05D003057 ORTHO05D003904 3.5e-23 113.6 178 37.1
Hma1.2p1_0035F.1_g021680 Hydrangea macrophylla HOM05D003057 ORTHO05D003904 2.3e-22 110.9 173 38.2
COL.COLO4_06538 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.3e-21 106.7 136 45.6
PSO063G5055 Papaver somniferum HOM05D003057 ORTHO05D003904 4.3e-21 106.7 178 35.4
TPR.G28675 Trifolium pratense HOM05D003057 ORTHO05D003904 4.3e-21 106.7 100 53.0
Medtr7g060420 Medicago truncatula HOM05D000645 ORTHO05D000494 2.1e-20 104.4 104 53.8
PGSC0003DMG400002198 Solanum tuberosum HOM05D003057 ORTHO05D003904 1.2e-18 98.6 107 46.7
AUR62026174 Chenopodium quinoa HOM05D003057 ORTHO05D003904 4.4e-18 96.7 140 38.6
COL.COLO4_35222 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.4e-18 96.7 161 38.5
COL.COLO4_37623 Corchorus olitorius HOM05D003057 ORTHO05D003904 7.5e-18 95.9 201 31.3
TPR.G29392 Trifolium pratense HOM05D003057 ORTHO05D003904 1.7e-17 94.7 87 52.9
Duzib205G1595 Durio zibethinus HOM05D003057 ORTHO05D003904 6.4e-17 92.8 232 30.2
PSO384G2001 Papaver somniferum HOM05D003057 ORTHO05D003904 4.1e-16 90.1 221 27.1
COL.COLO4_28150 Corchorus olitorius HOM05D003057 ORTHO05D003904 4.6e-15 86.7 141 38.3
COL.COLO4_37925 Corchorus olitorius HOM05D003057 ORTHO05D003904 1.7e-14 84.7 85 50.6
TPR.G5033 Trifolium pratense HOM05D003057 ORTHO05D003904 3.9e-14 83.6 89 44.9
Ah.01g013550 Amaranthus hybridus HOM05D003057 ORTHO05D003904 8.6e-14 82.4 163 33.7
PSO339G1811 Papaver somniferum HOM05D000294 ORTHO05D000177 2.1e-12 77.8 109 38.5
PSO832G1972 Papaver somniferum HOM05D000294 ORTHO05D000177 2.1e-12 77.8 109 38.5
PSO832G3441 Papaver somniferum HOM05D000294 ORTHO05D000177 2.1e-12 77.8 109 38.5
Psat6g164240 Pisum sativum HOM05D003057 ORTHO05D003904 2.1e-12 77.8 90 43.3
Psat7g039600 Pisum sativum HOM05D003057 ORTHO05D003904 2.1e-12 77.8 90 43.3
Psat7g220920 Pisum sativum HOM05D003057 ORTHO05D003904 2.1e-12 77.8 90 43.3
TPR.G33575 Trifolium pratense HOM05D003057 ORTHO05D003904 2.8e-12 77.4 70 50.0
Os06g0523701 Oryza sativa ssp. japonica HOM05D003057 ORTHO05D003904 6.2e-12 76.3 63 55.6
Rhsim05G0202400 Rhododendron simsii HOM05D001226 ORTHO05D001078 1.8e-11 74.7 79 43.0
TPR.G9017 Trifolium pratense HOM05D003057 ORTHO05D003904 8.9e-11 72.4 55 56.4
Ah.16g108140 Amaranthus hybridus HOM05D003057 ORTHO05D003904 1.5e-10 71.6 163 31.3
COL.COLO4_33793 Corchorus olitorius HOM05D003057 ORTHO05D003904 9.9e-10 68.9 142 36.6
Rhsim08G0114700 Rhododendron simsii HOM05D003057 ORTHO05D003904 1.7e-09 68.2 90 38.9
PSO832G4354 Papaver somniferum HOM05D003057 ORTHO05D003904 4.9e-09 66.6 45 62.2
TPR.G9018 Trifolium pratense HOM05D003057 ORTHO05D003904 5.4e-08 63.2 79 41.8
PSO675G6041 Papaver somniferum HOM05D003057 ORTHO05D003904 9.2e-08 62.4 94 39.4
Rhsim08G0101000 Rhododendron simsii HOM05D003057 ORTHO05D003904 2.7e-07 60.8 76 38.2
Psat6g044720 Pisum sativum HOM05D003057 ORTHO05D003904 1.3e-06 58.5 66 45.5
COL.COLO4_04362 Corchorus olitorius HOM05D003057 ORTHO05D003904 8.7e-06 55.8 82 42.7


User provided reference genes

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