Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 5.2e-190 667.5 336 100.0
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 3.4e-149 531.9 311 87.8
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 1.1e-142 510.4 340 77.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 2.0e-141 506.1 340 77.1
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 1.0e-140 503.8 342 75.7
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 3.8e-140 501.9 340 75.9
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 5.7e-136 488.0 343 72.9
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 7.4e-136 487.6 343 72.9
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.5e-133 479.9 284 81.3
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 3.9e-129 465.3 337 70.6
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 5.7e-128 461.5 343 69.7
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.8e-127 458.4 339 69.0
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.1e-126 457.2 311 73.6
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 3.1e-126 455.7 330 69.7
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 4.1e-126 455.3 280 76.8
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 7.0e-126 454.5 336 68.2
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.2e-125 453.8 330 69.7
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 1.6e-125 453.4 341 69.2
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.6e-125 452.6 281 76.9
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.6e-125 452.6 282 77.3
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.5e-125 452.2 280 76.1
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 3.5e-125 452.2 281 76.9
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 5.9e-125 451.4 281 76.5
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 5.9e-125 451.4 337 68.0
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.0e-124 450.7 281 76.2
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.0e-124 450.7 337 67.7
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 1.7e-124 449.9 282 74.5
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 2.2e-124 449.5 281 76.2
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 2.9e-124 449.1 332 68.7
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 5.0e-124 448.4 281 74.7
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 8.5e-124 447.6 343 66.8
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 1.5e-123 446.8 326 70.9
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.9e-123 446.4 310 73.2
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 2.5e-123 446.0 281 75.8
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 5.5e-123 444.9 342 68.1
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 5.5e-123 444.9 282 75.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 9.4e-123 444.1 280 75.0
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.1e-122 443.0 281 76.5
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 6.1e-122 441.4 341 67.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 8.0e-122 441.0 292 72.6
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.8e-121 439.9 281 76.5
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 2.3e-121 439.5 351 66.4
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 6.7e-121 438.0 312 68.3
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 1.2e-120 437.2 314 71.0
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 1.2e-120 437.2 292 72.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.0e-120 436.4 397 61.2
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 4.4e-120 435.3 262 79.4
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 5.7e-120 434.9 344 65.1
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 1.3e-119 433.7 280 74.6
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.3e-119 433.7 344 65.4
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 1.7e-119 433.3 306 70.3
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 2.2e-119 433.0 254 79.1
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 2.8e-119 432.6 307 70.4
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 3.7e-119 432.2 313 68.1
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 3.7e-119 432.2 306 70.6
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.8e-119 431.8 277 75.8
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.1e-118 430.6 315 67.6
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 2.4e-118 429.5 308 68.2
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 2.4e-118 429.5 322 65.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 4.1e-118 428.7 309 68.6
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 5.3e-118 428.3 358 62.0
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.2e-117 427.2 308 68.5
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.0e-117 426.4 292 73.3
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 3.5e-117 425.6 310 67.7
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 3.5e-117 425.6 330 66.4
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 5.9e-117 424.9 334 64.7
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 1.7e-116 423.3 340 64.4
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.7e-116 423.3 289 73.4
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.7e-116 423.3 339 65.8
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 3.8e-116 422.2 340 64.1
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 5.0e-116 421.8 339 63.7
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.5e-115 420.2 309 66.7
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.5e-115 420.2 339 63.1
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 1.5e-115 420.2 313 69.0
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.5e-115 419.5 287 69.7
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 4.2e-115 418.7 336 63.4
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 5.5e-115 418.3 310 70.0
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 7.2e-115 417.9 257 77.8
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 7.2e-115 417.9 307 67.8
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 9.4e-115 417.5 334 63.8
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 1.6e-114 416.8 332 65.1
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 3.6e-114 415.6 306 67.6
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.6e-112 409.5 306 68.3
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 2.6e-112 409.5 270 73.0
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 6.3e-111 404.8 280 71.1
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 2.3e-108 396.4 333 60.1
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 1.5e-107 393.7 254 74.8
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.2e-106 390.6 285 66.3
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 8.9e-105 384.4 391 51.9
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 7.5e-104 381.3 230 79.1
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 6.6e-100 368.2 280 67.9
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 6.8e-97 358.2 297 61.3
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.2e-94 349.4 221 81.4
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.4e-89 334.0 325 50.8
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 4.0e-89 332.4 259 57.9
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 3.7e-87 325.9 211 74.9
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.6e-85 318.9 261 55.9
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.3e-84 316.6 272 58.5
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 3.9e-84 315.8 316 56.6
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.2e-82 310.8 319 53.3
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 3.1e-81 306.2 241 58.9
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 4.9e-79 298.9 281 56.6
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.6e-74 283.9 159 79.2
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 1.5e-64 250.8 135 91.9
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.4e-63 245.0 147 78.9
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.1e-58 230.3 155 73.5
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 1.4e-54 217.6 134 76.9
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 4.3e-51 206.1 267 40.8
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.0e-48 197.2 215 49.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 4.6e-45 186.0 136 62.5
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.2e-40 171.4 97 80.4
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 4.2e-30 136.3 311 30.9
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 6.1e-29 132.5 256 32.8
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.1e-27 128.3 280 32.9
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.9e-15 87.0 99 50.5
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 5.5e-14 82.8 67 58.2
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.6e-11 73.9 49 65.3


User provided reference genes

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