Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 8.1e-143 510.4 254 100.0
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 6.0e-130 467.6 254 92.1
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 2.2e-108 396.0 256 81.6
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 4.6e-106 388.3 256 80.1
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 1.5e-104 383.3 256 78.5
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 1.3e-103 380.2 246 78.9
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 1.0e-100 370.5 242 78.1
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 9.4e-99 364.0 239 77.8
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 2.1e-98 362.8 239 77.8
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 2.5e-96 355.9 255 72.2
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 1.7e-95 353.2 247 71.7
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 1.7e-95 353.2 247 71.7
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 4.8e-95 351.7 234 74.4
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.1e-94 350.5 255 71.4
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 1.4e-94 350.1 253 71.9
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 1.4e-94 350.1 253 71.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 2.6e-93 345.9 255 69.4
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 4.5e-93 345.1 192 90.1
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 4.5e-93 345.1 255 69.4
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 5.9e-93 344.7 255 70.2
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 5.9e-93 344.7 247 72.5
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 7.7e-93 344.4 232 72.8
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 7.7e-93 344.4 232 72.8
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 1.0e-92 344.0 232 73.3
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 1.3e-92 343.6 243 72.0
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 2.2e-92 342.8 236 73.3
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 3.2e-91 339.0 236 73.3
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 5.5e-91 338.2 245 69.4
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 9.4e-91 337.4 248 68.1
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.2e-90 337.0 254 67.3
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 1.6e-90 336.7 255 67.5
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 2.7e-90 335.9 233 72.5
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 2.7e-90 335.9 244 70.5
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 6.1e-90 334.7 242 69.8
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 3.0e-89 332.4 255 67.1
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.1e-88 330.5 248 67.7
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 1.5e-88 330.1 235 70.2
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 3.3e-88 328.9 240 69.2
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 1.3e-87 327.0 247 68.0
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 2.2e-87 326.2 237 70.9
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 1.1e-86 323.9 283 61.5
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 2.4e-86 322.8 243 68.3
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 2.4e-86 322.8 265 64.9
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 3.1e-86 322.4 256 64.8
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 3.1e-86 322.4 245 66.9
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 2.6e-85 319.3 242 66.1
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.5e-85 318.9 245 65.3
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 5.9e-85 318.2 245 65.3
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.9e-85 318.2 244 67.6
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.0e-84 317.4 256 63.7
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.0e-84 317.4 242 67.8
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 1.3e-84 317.0 242 67.8
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 1.3e-84 317.0 256 64.1
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 2.9e-84 315.8 246 65.4
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 2.9e-84 315.8 246 65.4
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 2.9e-84 315.8 258 63.6
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 3.8e-84 315.5 271 63.8
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 3.8e-84 315.5 241 69.7
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 5.0e-84 315.1 245 65.7
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 5.0e-84 315.1 236 69.1
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 6.5e-84 314.7 252 65.1
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 8.5e-84 314.3 285 60.4
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 1.1e-83 313.9 255 65.1
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 1.9e-83 313.2 245 64.9
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 2.5e-83 312.8 245 64.9
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 2.5e-83 312.8 245 64.9
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.2e-83 312.4 245 64.9
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.2e-83 312.4 245 64.9
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 4.2e-83 312.0 231 66.2
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.2e-83 311.2 258 62.4
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 7.2e-83 311.2 245 64.1
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 1.2e-82 310.5 245 64.1
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 1.2e-82 310.5 245 64.5
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.1e-82 309.7 271 63.1
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 3.6e-82 308.9 231 70.6
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 4.7e-82 308.5 250 64.4
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 4.7e-82 308.5 270 63.0
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 6.1e-82 308.1 243 66.7
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.8e-81 306.6 270 63.0
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 3.0e-81 305.8 232 69.4
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 5.2e-81 305.1 254 63.8
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 6.7e-81 304.7 255 63.5
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 8.8e-81 304.3 183 83.6
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 2.0e-80 303.1 267 59.6
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 9.7e-80 300.8 232 65.5
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 3.7e-79 298.9 249 61.4
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 3.7e-79 298.9 243 63.4
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 4.1e-78 295.4 235 63.4
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 1.6e-77 293.5 221 68.8
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 1.6e-77 293.5 256 65.2
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 3.2e-75 285.8 262 56.1
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 3.2e-75 285.8 251 61.0
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 1.6e-74 283.5 241 59.3
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 2.7e-74 282.7 233 59.7
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.2e-72 277.3 260 64.2
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 1.5e-72 276.9 275 53.8
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 2.4e-70 269.6 227 63.0
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 3.1e-70 269.2 270 52.6
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 2.6e-64 249.6 240 55.4
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.8e-62 243.4 245 56.3
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 1.1e-51 207.6 221 53.4
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 3.3e-51 206.1 256 45.7
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 2.8e-50 203.0 281 42.0
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 9.2e-46 188.0 119 74.8
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 1.2e-42 177.6 257 45.1
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 4.0e-41 172.6 188 49.5
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 2.4e-38 163.3 118 64.4
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 7.3e-35 151.8 113 76.1
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 5.2e-33 145.6 120 59.2
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 8.9e-33 144.8 127 61.4
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.3e-28 131.0 152 54.6
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 6.6e-20 102.1 117 47.9
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 3.3e-19 99.8 147 37.4
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.8e-09 67.4 38 86.8
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 7.6e-08 62.0 51 60.8
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 9.9e-08 61.6 133 36.1
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.9e-07 60.1 58 50.0


User provided reference genes

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