Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 3.2e-116 421.8 218 100.0
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 1.5e-105 386.3 220 91.4
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 1.8e-103 379.4 215 90.7
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 8.9e-98 360.5 220 85.9
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 5.8e-97 357.8 220 84.5
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 3.7e-96 355.1 220 84.1
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 7.0e-95 350.9 220 82.3
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 1.2e-94 350.1 220 80.9
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 4.6e-94 348.2 220 80.9
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 6.6e-93 344.4 217 83.4
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 1.9e-92 342.8 220 80.5
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 1.6e-91 339.7 220 80.0
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 2.4e-87 325.9 225 75.1
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 9.2e-87 323.9 223 75.3
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 4.6e-86 321.6 220 75.0
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 4.6e-86 321.6 222 78.4
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 7.8e-86 320.9 218 75.2
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 1.3e-85 320.1 220 73.6
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 1.7e-85 319.7 225 74.2
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.5e-84 316.6 223 74.0
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 1.5e-84 316.6 220 72.7
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.5e-84 315.8 218 74.8
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 2.5e-84 315.8 220 74.1
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 4.3e-84 315.1 226 73.0
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 5.6e-84 314.7 217 75.1
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 9.5e-84 313.9 223 73.5
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 2.8e-83 312.4 215 72.1
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 8.1e-83 310.8 218 71.1
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 1.1e-82 310.5 248 66.5
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 1.4e-82 310.1 217 71.9
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 4.0e-82 308.5 217 71.4
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 6.8e-82 307.8 219 72.1
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 8.9e-82 307.4 207 76.8
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 8.9e-82 307.4 219 70.3
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 1.5e-81 306.6 220 69.5
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 2.0e-81 306.2 220 70.5
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 2.0e-81 306.2 216 72.2
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 2.0e-81 306.2 219 69.9
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.6e-81 305.8 217 71.4
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 2.6e-81 305.8 217 71.0
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.4e-81 305.4 218 70.2
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 4.4e-81 305.1 218 68.8
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 4.4e-81 305.1 219 69.4
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 4.4e-81 305.1 218 69.7
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 5.8e-81 304.7 218 70.2
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 5.8e-81 304.7 218 71.1
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 7.6e-81 304.3 219 68.5
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 7.6e-81 304.3 214 68.7
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 9.9e-81 303.9 227 66.1
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 1.3e-80 303.5 218 69.7
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 1.3e-80 303.5 220 70.9
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 1.3e-80 303.5 212 72.2
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 1.7e-80 303.1 221 69.2
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 2.2e-80 302.8 226 70.8
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 2.2e-80 302.8 222 71.2
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 3.8e-80 302.0 235 65.1
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 6.4e-80 301.2 216 71.8
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.9e-79 299.7 218 67.9
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.9e-79 299.7 218 68.3
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 1.9e-79 299.7 222 69.4
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 2.4e-79 299.3 219 69.9
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 3.2e-79 298.9 218 67.4
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 3.2e-79 298.9 218 67.4
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 3.2e-79 298.9 218 67.4
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 3.2e-79 298.9 218 68.8
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 4.1e-79 298.5 221 67.9
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 4.1e-79 298.5 222 68.9
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 5.4e-79 298.1 218 70.2
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 9.2e-79 297.4 222 67.6
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.2e-78 297.0 216 66.7
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.6e-78 296.6 217 68.7
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 2.7e-78 295.8 218 67.0
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 3.5e-78 295.4 226 69.5
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 3.5e-78 295.4 221 68.3
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 4.6e-78 295.0 218 67.4
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 4.6e-78 295.0 220 70.9
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 7.8e-78 294.3 232 65.9
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 1.0e-77 293.9 219 68.0
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.0e-77 293.9 226 64.6
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 1.0e-77 293.9 263 60.5
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 1.3e-77 293.5 218 66.1
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 1.3e-77 293.5 218 66.1
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 1.7e-77 293.1 228 63.6
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 3.0e-77 292.4 229 67.7
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 3.0e-77 292.4 221 68.8
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 5.1e-77 291.6 219 66.7
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 6.6e-77 291.2 218 67.4
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 8.6e-77 290.8 217 68.7
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 1.1e-76 290.4 219 66.2
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 1.9e-76 289.7 215 67.0
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 2.5e-76 289.3 209 70.3
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 7.3e-76 287.7 229 64.2
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 1.6e-75 286.6 217 65.4
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.6e-75 286.6 221 67.4
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.4e-74 283.5 221 66.5
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 1.8e-74 283.1 245 62.0
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 4.0e-74 282.0 218 68.3
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.3e-72 276.9 218 64.2
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 2.9e-72 275.8 218 65.1
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 4.9e-72 275.0 259 59.8
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 6.4e-72 274.6 225 64.0
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 8.4e-72 274.2 220 62.3
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 8.4e-72 274.2 221 62.0
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 9.3e-71 270.8 209 65.6
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 3.5e-70 268.9 224 62.5
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 7.8e-70 267.7 212 66.5
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 1.7e-69 266.5 216 62.5
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 1.1e-68 263.8 252 57.9
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 5.6e-68 261.5 157 79.0
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.6e-67 260.0 203 65.0
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 6.2e-67 258.1 191 67.5
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 4.0e-66 255.4 157 77.1
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 3.9e-61 238.8 220 60.9
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 1.9e-60 236.5 184 65.2
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 2.0e-57 226.5 191 64.4
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 1.7e-56 223.4 130 77.7
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 1.1e-55 220.7 232 50.4
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 8.7e-53 211.1 220 51.4
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 1.6e-51 206.8 115 82.6
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 2.1e-51 206.5 224 54.9
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 4.8e-51 205.3 123 77.2
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 5.8e-49 198.4 246 46.7
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 7.6e-49 198.0 207 49.8
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 3.2e-47 192.6 236 45.8
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 5.5e-39 165.2 100 78.0
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.2e-38 164.1 167 53.9
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 1.3e-35 154.1 182 48.9
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 2.8e-35 152.9 251 37.8
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 1.1e-26 124.4 249 36.5
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 1.0e-13 81.3 43 86.0
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 2.8e-11 73.2 85 50.6
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 1.6e-09 67.4 38 76.3
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 4.5e-09 65.9 37 78.4
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 7.7e-09 65.1 43 65.1
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 2.9e-08 63.2 212 29.2
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 3.6e-06 56.2 41 70.7


User provided reference genes

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