Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.5e-72 276.2 148 100.0
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.7e-60 236.1 144 86.1
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 2.1e-58 229.2 144 84.7
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 2.3e-49 199.1 147 73.5
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 2.0e-48 196.1 144 74.3
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 2.8e-47 192.2 144 73.6
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 2.0e-45 186.0 142 73.2
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 3.5e-45 185.3 142 71.8
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 2.7e-37 159.1 144 62.5
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 4.7e-34 148.3 144 56.2
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 1.0e-33 147.1 144 56.2
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.4e-33 146.7 144 55.6
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 1.4e-33 146.7 144 55.6
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 4.0e-33 145.2 144 56.2
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 4.4e-32 141.7 144 52.8
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 4.4e-32 141.7 139 56.8
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.5e-32 141.0 144 54.9
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 7.5e-32 141.0 144 54.9
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 9.8e-32 140.6 134 58.2
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 1.3e-31 140.2 170 50.0
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 3.7e-31 138.7 139 58.3
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 4.9e-31 138.3 144 56.2
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 2.4e-30 136.0 144 53.5
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.4e-30 136.0 144 51.4
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 2.4e-30 136.0 144 54.9
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.2e-29 133.7 144 50.7
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 6.0e-29 131.3 152 50.0
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 6.0e-29 131.3 144 54.2
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 7.8e-29 131.0 144 50.7
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 1.7e-28 129.8 145 49.7
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 1.7e-28 129.8 144 52.1
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.7e-28 129.8 145 48.3
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.0e-28 129.0 164 49.4
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 3.0e-28 129.0 147 49.7
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 3.9e-28 128.6 144 49.3
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 3.9e-28 128.6 96 66.7
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 5.0e-28 128.3 144 48.6
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 5.0e-28 128.3 145 49.0
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 1.5e-27 126.7 119 62.2
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 3.3e-27 125.6 137 52.6
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 5.6e-27 124.8 144 47.2
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 5.6e-27 124.8 144 45.8
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 7.3e-27 124.4 165 43.6
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 9.5e-27 124.0 144 50.0
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 1.2e-26 123.6 144 47.2
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 1.2e-26 123.6 144 45.8
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 1.6e-26 123.2 144 51.4
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 2.8e-26 122.5 141 48.2
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 2.8e-26 122.5 142 49.3
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 2.8e-26 122.5 144 50.0
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 8.0e-26 120.9 145 46.9
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 1.4e-25 120.2 144 46.5
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 1.5e-24 116.7 143 51.0
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 4.4e-24 115.2 144 46.5
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 5.8e-24 114.8 146 49.3
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 7.5e-24 114.4 144 45.1
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.3e-23 113.6 144 46.5
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 1.7e-23 113.2 144 45.8
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 1.1e-22 110.5 143 49.0
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 1.4e-22 110.2 144 46.5
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 2.4e-22 109.4 173 39.9
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 2.4e-22 109.4 144 46.5
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 5.4e-22 108.2 115 56.5
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 1.6e-21 106.7 138 46.4
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.6e-21 105.1 165 43.0
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 5.1e-20 101.7 158 45.6
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 1.9e-19 99.8 120 44.2
arahy.Tifrunner.gnm1.ann1.D76417 Arachis hypogaea HOM05D007451 ORTHO05D009399 3.3e-19 99.0 120 51.7
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.6e-18 96.7 144 43.8
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.6e-18 96.7 144 43.8
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.6e-18 96.7 144 43.8
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 2.8e-18 95.9 107 48.6
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 4.7e-18 95.1 119 42.0
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.1e-17 94.0 131 45.0
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 1.4e-17 93.6 99 50.5
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 4.0e-17 92.0 147 42.2
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 6.8e-17 91.3 144 41.7
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.0e-16 89.7 147 41.5
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 7.5e-16 87.8 147 42.2
Duzib192G0695 Durio zibethinus HOM05D007451 ORTHO05D009399 9.9e-16 87.4 144 41.0
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.1e-14 84.0 130 41.5
Eucgr.H02213 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.1e-14 81.3 89 51.7
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 1.2e-13 80.5 123 44.7
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 2.1e-13 79.7 132 40.2
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.8e-13 77.8 96 44.8
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.3e-12 77.0 131 38.9
Os02g0244000 Oryza sativa ssp. japonica HOM05D007451 ORTHO05D009399 5.1e-12 75.1 114 41.2
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.5e-11 73.6 131 38.2
Eucgr.C02335 Eucalyptus grandis HOM05D007451 ORTHO05D009399 9.5e-11 70.9 84 44.0
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 2.4e-09 66.2 82 41.5
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 6.8e-09 64.7 113 34.5
C04p14350 Brassica napus HOM05D005261 ORTHO05D006180 9.9e-08 60.8 63 47.6
MBI06_g46402_MAGBIO Magnolia biondii HOM05D000482 ORTHO05D000349 9.9e-08 60.8 93 38.7
AagrBONN_evm.TU.Sc2ySwM_228.4815 Anthoceros agrestis HOM05D007451 ORTHO05D009399 2.2e-07 59.7 139 29.5
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 4.2e-06 55.5 50 56.0
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 9.2e-06 54.3 54 48.1


User provided reference genes

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