Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3822 Trifolium pratense HOM05D002954 ORTHO05D003353 1.9e-77 292.4 143 100.0
VMungo0464G1442 Vigna mungo HOM05D005949 ORTHO05D006945 5.5e-40 167.9 177 49.2
Psat2g134520 Pisum sativum HOM05D002954 ORTHO05D003353 1.7e-36 156.4 152 51.3
TPR.G16180 Trifolium pratense HOM05D002954 ORTHO05D003353 3.1e-35 152.1 77 94.8
TPR.G22956 Trifolium pratense HOM05D013784 ORTHO05D003353 4.3e-24 115.2 67 76.1
arahy.Tifrunner.gnm1.ann1.NE3TTV Arachis hypogaea HOM05D002954 ORTHO05D003353 2.8e-23 112.5 200 34.5
arahy.Tifrunner.gnm1.ann1.R7YZCH Arachis hypogaea HOM05D002954 ORTHO05D003353 5.8e-21 104.8 188 34.6
arahy.Tifrunner.gnm1.ann1.9YTX13 Arachis hypogaea HOM05D002954 ORTHO05D003353 2.2e-20 102.8 198 32.8
Lj1g0003177 Lotus japonicus HOM05D002954 ORTHO05D003353 6.4e-20 101.3 169 39.1
Nitab4.5_0003920g0040 Nicotiana tabacum HOM05D002954 ORTHO05D015034 8.3e-20 100.9 136 42.6
Solyc11g044937.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.1e-19 100.5 193 33.7
arahy.Tifrunner.gnm1.ann1.HMQ64L Arachis hypogaea HOM05D002954 ORTHO05D003353 1.6e-18 96.7 120 41.7
VMungo1309G2137 Vigna mungo HOM05D000006 ORTHO05D000001 1.6e-18 96.7 79 58.2
arahy.Tifrunner.gnm1.ann1.5TT13I Arachis hypogaea HOM05D002954 ORTHO05D003353 2.1e-18 96.3 190 33.7
Nitab4.5_0001404g0070 Nicotiana tabacum HOM05D002954 ORTHO05D015034 7.8e-18 94.4 121 45.5
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 1.0e-17 94.0 65 64.6
Psat5g178040 Pisum sativum HOM05D002954 ORTHO05D003353 1.3e-17 93.6 65 64.6
Lj1g0008605 Lotus japonicus HOM05D002954 ORTHO05D003353 6.6e-17 91.3 146 40.4
arahy.Tifrunner.gnm1.ann1.QKP2RW Arachis hypogaea HOM05D002954 ORTHO05D003353 2.5e-16 89.4 159 34.6
Nitab4.5_0000154g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 7.3e-16 87.8 77 53.2
Psat3g100040 Pisum sativum HOM05D002954 ORTHO05D003353 9.5e-16 87.4 164 35.4
TPR.G32610 Trifolium pratense HOM05D002954 ORTHO05D003353 2.1e-15 86.3 44 93.2
Psat5g237440 Pisum sativum HOM05D002954 ORTHO05D003353 3.1e-14 82.4 194 30.9
Lalb_Chr22g0358521 Lupinus albus HOM05D002954 ORTHO05D003353 4.0e-14 82.0 66 54.5
Psat5g178080 Pisum sativum HOM05D002954 ORTHO05D003353 6.8e-14 81.3 52 67.3
arahy.Tifrunner.gnm1.ann1.HJ32VC Arachis hypogaea HOM05D002954 ORTHO05D003353 7.5e-13 77.8 66 56.1
Lalb_Chr22g0361071 Lupinus albus HOM05D002954 ORTHO05D003353 1.7e-12 76.6 88 48.9
Sopen11g015860 Solanum pennellii HOM05D002954 ORTHO05D003353 1.7e-12 76.6 164 30.5
arahy.Tifrunner.gnm1.ann1.NBL2GQ Arachis hypogaea HOM05D009662 ORTHO05D003353 2.2e-12 76.3 75 60.0
Nitab4.5_0000008g0430 Nicotiana tabacum HOM05D002954 ORTHO05D015034 2.2e-12 76.3 69 50.7
arahy.Tifrunner.gnm1.ann1.41X87M Arachis hypogaea HOM05D009662 ORTHO05D003353 6.4e-12 74.7 75 57.3
Lj6g0018229 Lotus japonicus HOM05D002954 ORTHO05D003353 1.1e-11 73.9 201 25.9
Nitab4.5_0000051g0340 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.1e-11 73.9 69 50.7
arahy.Tifrunner.gnm1.ann1.35BP8C Arachis hypogaea HOM05D009662 ORTHO05D003353 1.4e-11 73.6 165 31.5
arahy.Tifrunner.gnm1.ann1.2WW1WS Arachis hypogaea HOM05D009662 ORTHO05D003353 1.9e-11 73.2 77 54.5
arahy.Tifrunner.gnm1.ann1.1S2QVS Arachis hypogaea HOM05D009662 ORTHO05D003353 2.4e-11 72.8 74 56.8
arahy.Tifrunner.gnm1.ann1.XG7NYG Arachis hypogaea HOM05D009662 ORTHO05D003353 2.4e-11 72.8 74 56.8
arahy.Tifrunner.gnm1.ann1.ZY1J0Y Arachis hypogaea HOM05D002954 ORTHO05D003353 2.4e-11 72.8 70 51.4
Phvul.003G087300 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.2e-11 72.4 189 30.2
Nitab4.5_0002473g0090 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.1e-11 72.0 163 32.5
arahy.Tifrunner.gnm1.ann1.JC8RXL Arachis hypogaea HOM05D009662 ORTHO05D003353 9.2e-11 70.9 80 52.5
Nitab4.5_0002373g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 9.2e-11 70.9 202 30.7
arahy.Tifrunner.gnm1.ann1.4EB8G0 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.2e-10 70.5 74 55.4
arahy.Tifrunner.gnm1.ann1.LE5ID3 Arachis hypogaea HOM05D009662 ORTHO05D003353 2.1e-10 69.7 139 38.8
arahy.Tifrunner.gnm1.ann1.0Q01G3 Arachis hypogaea HOM05D002954 ORTHO05D003353 2.7e-10 69.3 79 45.6
arahy.Tifrunner.gnm1.ann1.VKQ8LP Arachis hypogaea HOM05D009662 ORTHO05D003353 2.7e-10 69.3 75 54.7
Nitab4.5_0000386g0150 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.5e-10 68.9 87 44.8
Nitab4.5_0006180g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.0e-09 67.4 61 52.5
Phvul.008G149000 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.0e-09 67.4 167 29.9
arahy.Tifrunner.gnm1.ann1.B3S8NN Arachis hypogaea HOM05D002954 ORTHO05D003353 1.3e-09 67.0 73 45.2
arahy.Tifrunner.gnm1.ann1.04XLZZ Arachis hypogaea HOM05D002954 ORTHO05D003353 1.7e-09 66.6 61 50.8
arahy.Tifrunner.gnm1.ann1.IDQF0L Arachis hypogaea HOM05D009662 ORTHO05D003353 1.7e-09 66.6 49 63.3
arahy.Tifrunner.gnm1.ann1.IEL8E2 Arachis hypogaea HOM05D002954 ORTHO05D003353 1.7e-09 66.6 70 47.1
Phvul.001G118100 Phaseolus vulgaris HOM05D002954 ORTHO05D000385 1.7e-09 66.6 119 35.3
Solyc01g010405.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.7e-09 66.6 73 45.2
arahy.Tifrunner.gnm1.ann1.27XFTQ Arachis hypogaea HOM05D009662 ORTHO05D003353 2.3e-09 66.2 74 52.7
Sopen09g020910 Solanum pennellii HOM05D002954 ORTHO05D003353 2.3e-09 66.2 62 51.6
arahy.Tifrunner.gnm1.ann1.FG1AAR Arachis hypogaea HOM05D009662 ORTHO05D003353 3.0e-09 65.9 62 58.1
Nitab4.5_0004985g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.0e-09 65.9 89 40.4
arahy.Tifrunner.gnm1.ann1.N8CY10 Arachis hypogaea HOM05D009662 ORTHO05D003353 3.9e-09 65.5 72 54.2
Glyma.20G055700 Glycine max HOM05D002954 ORTHO05D003353 6.6e-09 64.7 194 26.8
Nitab4.5_0000358g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.6e-09 64.7 65 47.7
Zm00001eb181280 Zea mays HOM05D008576 ORTHO05D000385 6.6e-09 64.7 128 32.0
CAN.G125.23 Capsicum annuum HOM05D000107 ORTHO05D000062 8.6e-09 64.3 73 41.1
CAN.G831.2 Capsicum annuum HOM05D002954 ORTHO05D003353 1.5e-08 63.5 62 46.8
Phvul.L001985 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.9e-08 63.2 172 27.9
A09p53580 Brassica napus HOM05D008309 ORTHO05D010308 2.5e-08 62.8 125 30.4
arahy.Tifrunner.gnm1.ann1.D1MK81 Arachis hypogaea HOM05D002954 ORTHO05D003353 3.3e-08 62.4 71 45.1
Lj5g0000508 Lotus japonicus HOM05D002954 ORTHO05D003353 3.3e-08 62.4 191 25.1
Phvul.001G154901 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 3.3e-08 62.4 72 47.2
CAN.G93.14 Capsicum annuum HOM05D009662 ORTHO05D003353 4.3e-08 62.0 61 45.9
Lj4g0009760 Lotus japonicus HOM05D002954 ORTHO05D003353 4.3e-08 62.0 186 25.3
Phvul.L002237 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 4.3e-08 62.0 63 47.6
Zm00001eb092990 Zea mays HOM05D008576 ORTHO05D000385 4.3e-08 62.0 128 31.2
Nitab4.5_0006180g0060 Nicotiana tabacum HOM05D002954 ORTHO05D003353 5.6e-08 61.6 42 59.5
Ca_11947_v3 Cicer arietinum L. HOM05D009226 ORTHO05D010767 7.3e-08 61.2 147 28.6
arahy.Tifrunner.gnm1.ann1.T3L04J Arachis hypogaea HOM05D009662 ORTHO05D003353 1.2e-07 60.5 48 58.3
Psat0s3286g0120 Pisum sativum HOM05D002954 ORTHO05D003353 6.2e-07 58.2 79 40.5
arahy.Tifrunner.gnm1.ann1.R8QYAJ Arachis hypogaea HOM05D009662 ORTHO05D003353 8.1e-07 57.8 56 50.0
Nitab4.5_0006547g0010 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.1e-07 57.8 72 43.1
Peaxi162Scf02065g00005 Petunia axillaris HOM05D002954 ORTHO05D010308 8.1e-07 57.8 81 39.5
Sopen01g012120 Solanum pennellii HOM05D000002 ORTHO05D000001 8.1e-07 57.8 60 46.7
Sopen09g012940 Solanum pennellii HOM05D009662 ORTHO05D000034 8.1e-07 57.8 43 60.5
Solyc10g150115.1 Solanum lycopersicum HOM05D002954 ORTHO05D003353 1.1e-06 57.4 113 34.5
arahy.Tifrunner.gnm1.ann1.KMI722 Arachis hypogaea HOM05D009662 ORTHO05D003353 1.4e-06 57.0 62 50.0
Nitab4.5_0002100g0170 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.4e-06 57.0 53 50.9
Phvul.011G145200 Phaseolus vulgaris HOM05D002954 ORTHO05D003353 1.4e-06 57.0 60 46.7
Nitab4.5_0002430g0040 Nicotiana tabacum HOM05D002954 ORTHO05D003353 1.8e-06 56.6 183 27.9
Psat0s1021g0160 Pisum sativum HOM05D002954 ORTHO05D003353 1.8e-06 56.6 68 44.1
Psat0s1021g0200 Pisum sativum HOM05D002954 ORTHO05D003353 1.8e-06 56.6 68 44.1
Psat0s10455g0040 Pisum sativum HOM05D002954 ORTHO05D003353 1.8e-06 56.6 68 44.1
Psat0s9469g0040 Pisum sativum HOM05D002954 ORTHO05D003353 1.8e-06 56.6 68 44.1
Psat0s2772g0080 Pisum sativum HOM05D002954 ORTHO05D003353 2.4e-06 56.2 83 43.4
Nitab4.5_0007595g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 3.1e-06 55.8 62 45.2
Nitab4.5_0003952g0070 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-06 55.5 78 46.2
Nitab4.5_0010215g0020 Nicotiana tabacum HOM05D002954 ORTHO05D003353 4.0e-06 55.5 54 50.0
Psat0s1021g0240 Pisum sativum HOM05D002954 ORTHO05D003353 4.0e-06 55.5 68 44.1
Nitab4.5_0000229g0050 Nicotiana tabacum HOM05D002954 ORTHO05D003353 6.8e-06 54.7 181 27.6
Nitab4.5_0001076g0100 Nicotiana tabacum HOM05D002954 ORTHO05D003353 8.9e-06 54.3 162 29.6
Peaxi162Scf00304g00124 Petunia axillaris HOM05D009128 ORTHO05D011389 8.9e-06 54.3 137 24.8
Psat3g063200 Pisum sativum HOM05D002954 ORTHO05D003353 8.9e-06 54.3 60 46.7


User provided reference genes

Program Settings