Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38171 Trifolium pratense HOM05D006215 ORTHO05D007719 1.2e-84 316.6 168 100.0
Psat5g012560 Pisum sativum HOM05D006215 ORTHO05D007719 1.7e-70 269.6 166 81.3
Ca_15473_v3 Cicer arietinum L. HOM05D006215 ORTHO05D007719 2.2e-70 269.2 164 87.2
Medtr3g114470 Medicago truncatula HOM05D006215 ORTHO05D007719 7.2e-69 264.2 166 78.9
Phvul.009G018900 Phaseolus vulgaris HOM05D006215 ORTHO05D007719 4.7e-68 261.5 166 77.1
Glyma.06G021900 Glycine max HOM05D006215 ORTHO05D007719 8.0e-68 260.8 166 80.1
Glyma.04G021700 Glycine max HOM05D006215 ORTHO05D007719 1.8e-67 259.6 166 77.1
Lj1g0006385 Lotus japonicus HOM05D006215 ORTHO05D007719 3.4e-66 255.4 169 77.5
Lalb_Chr23g0266051 Lupinus albus HOM05D006215 ORTHO05D007719 6.3e-65 251.1 166 76.5
VMungo1215G3215 Vigna mungo HOM05D006215 ORTHO05D007719 6.3e-65 251.1 158 76.6
arahy.Tifrunner.gnm1.ann1.89BLSN Arachis hypogaea HOM05D006215 ORTHO05D007719 1.2e-63 246.9 168 80.4
Potri.002G018100 Populus trichocarpa HOM05D006215 ORTHO05D007719 4.7e-60 235.0 133 82.7
PGSC0003DMG400009949 Solanum tuberosum HOM05D006215 ORTHO05D007719 1.8e-59 233.0 133 80.5
Prupe.4G165400 Prunus persica HOM05D006215 ORTHO05D007719 4.0e-59 231.9 162 69.8
Solyc04g081850.4 Solanum lycopersicum HOM05D006215 ORTHO05D007719 5.2e-59 231.5 133 79.7
CSS0005676 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 8.9e-59 230.7 133 81.2
CSS0039588 Camellia sinensis var. sinensis HOM05D006215 ORTHO05D007719 8.9e-59 230.7 133 81.2
DCAR_009503 Daucus carota HOM05D006215 ORTHO05D007719 8.9e-59 230.7 133 82.0
Sopen04g035480 Solanum pennellii HOM05D006215 ORTHO05D007719 1.5e-58 229.9 133 78.9
Cpa.g.sc26.282 Carica papaya HOM05D006215 ORTHO05D007719 2.0e-58 229.6 167 67.1
vmacro21863 Vaccinium macrocarpon HOM05D006215 ORTHO05D007719 2.6e-58 229.2 133 81.2
Ciclev10002478m.g Citrus clementina HOM05D006215 ORTHO05D007719 4.4e-58 228.4 168 69.0
Manes.18G010300 Manihot esculenta HOM05D006215 ORTHO05D007719 1.7e-57 226.5 173 67.1
Nitab4.5_0004361g0040 Nicotiana tabacum HOM05D006215 ORTHO05D007719 1.7e-57 226.5 159 69.2
Cfa013993 Carpinus fangiana HOM05D006215 ORTHO05D007719 3.7e-57 225.3 133 80.5
QL02p012562 Quercus lobata HOM05D006215 ORTHO05D007719 8.3e-57 224.2 133 78.2
COL.COLO4_26102 Corchorus olitorius HOM05D006215 ORTHO05D007719 1.1e-56 223.8 133 78.2
Duzib041G0142 Durio zibethinus HOM05D006215 ORTHO05D007719 1.1e-56 223.8 133 78.9
Thecc.08G049400 Theobroma cacao HOM05D006215 ORTHO05D007719 1.1e-56 223.8 133 78.9
Gohir.D01G096200 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.4e-56 223.4 168 64.9
Rhsim06G0017400 Rhododendron simsii HOM05D006215 ORTHO05D007719 2.4e-56 222.6 134 79.1
Lj4C18G8 Lonicera japonica HOM05D000114 ORTHO05D009837 4.1e-56 221.9 133 74.4
Gorai.002G121700 Gossypium raimondii HOM05D006215 ORTHO05D007719 5.4e-56 221.5 168 64.3
Sabra02G0014400 Salix brachista HOM05D006215 ORTHO05D007719 5.4e-56 221.5 166 66.3
Dinv31883 Davidia involucrata HOM05D006215 ORTHO05D007719 7.0e-56 221.1 181 63.5
SGA_v2.0_scaffold292G47375 Striga asiatica HOM05D006215 ORTHO05D007719 7.0e-56 221.1 133 78.2
Atru.chr13.240 Acer truncatum HOM05D006215 ORTHO05D007719 9.2e-56 220.7 161 68.3
MSTRG.1158 Avicennia marina HOM05D006215 ORTHO05D007719 1.6e-55 219.9 133 75.9
CiPaw.07G144900 Carya illinoinensis HOM05D006215 ORTHO05D007719 1.6e-55 219.9 133 78.2
Migut.C00887 Erythranthe guttata HOM05D006215 ORTHO05D007719 1.6e-55 219.9 133 77.4
Gohir.A01G109400 Gossypium hirsutum HOM05D006215 ORTHO05D007719 1.6e-55 219.9 168 64.3
GSVIVG01009974001 Vitis vinifera HOM05D006215 ORTHO05D009429 1.6e-55 219.9 133 75.9
Eucgr.F03725 Eucalyptus grandis HOM05D006215 ORTHO05D007719 2.0e-55 219.5 174 62.1
MD03G1242500 Malus domestica HOM05D006215 ORTHO05D007719 4.6e-55 218.4 162 66.0
Lsat_1_v5_gn_8_29640 Lactuca sativa HOM05D006215 ORTHO05D007719 5.9e-55 218.0 133 77.4
TWI12G0400 Tripterygium wilfordii HOM05D006215 ORTHO05D007719 7.8e-55 217.6 134 79.9
Nn5g30812 Nelumbo nucifera HOM05D006215 ORTHO05D007719 1.3e-54 216.9 133 75.2
BcaB02g07052 Brassica carinata HOM05D006215 ORTHO05D007719 1.7e-54 216.5 163 67.5
A07p28630 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-54 216.5 168 66.7
A07p41490 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-54 216.5 161 68.3
C06p32240 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-54 216.5 168 66.7
BolC6t38347H Brassica oleracea HOM05D006215 ORTHO05D007719 1.7e-54 216.5 168 66.7
BraA07t30504Z Brassica rapa HOM05D006215 ORTHO05D007719 1.7e-54 216.5 168 66.7
BraA07t31681Z Brassica rapa HOM05D006215 ORTHO05D007719 1.7e-54 216.5 161 68.3
FvH4_3g18360 Fragaria vesca HOM05D006215 ORTHO05D007719 1.7e-54 216.5 158 67.7
FAN11G1504 Fragaria x ananassa HOM05D006215 ORTHO05D007719 1.7e-54 216.5 158 67.7
BcaC08g45544 Brassica carinata HOM05D006215 ORTHO05D007719 2.3e-54 216.1 168 66.7
RcHm_v2.0_Chr5g0031011 Rosa chinensis HOM05D006215 ORTHO05D007719 2.3e-54 216.1 162 67.3
Thhalv10019087m.g Eutrema salsugineum HOM05D006215 ORTHO05D007719 3.0e-54 215.7 133 78.9
Sed0008956 Sechium edule HOM05D006215 ORTHO05D007719 3.0e-54 215.7 133 75.9
CsaV3_3G046060 Cucumis sativus L. HOM05D006215 ORTHO05D007719 6.6e-54 214.5 133 77.4
AL2G36000 Arabidopsis lyrata HOM05D006215 ORTHO05D007719 8.6e-54 214.2 133 78.2
AT1G75980 Arabidopsis thaliana HOM05D006215 ORTHO05D007719 8.6e-54 214.2 133 77.4
BcaB05g24966 Brassica carinata HOM05D006215 ORTHO05D007719 8.6e-54 214.2 164 67.7
MELO3C003734.2 Cucumis melo HOM05D006215 ORTHO05D007719 8.6e-54 214.2 133 78.2
Carub.0002s2287 Capsella rubella HOM05D006215 ORTHO05D007719 1.1e-53 213.8 133 78.2
Sp5g31100 Schrenkiella parvula HOM05D006215 ORTHO05D007719 1.5e-53 213.4 133 77.4
C06p49900 Brassica napus HOM05D006215 ORTHO05D007719 2.5e-53 212.6 133 77.4
EL10Ac1g02129 Beta vulgaris HOM05D006215 ORTHO05D007719 3.3e-53 212.2 133 75.2
CANSAT25G1322 Cannabis sativa HOM05D006215 ORTHO05D007719 4.3e-53 211.8 131 77.1
THA.LOC104811433 Tarenaya hassleriana HOM05D006215 ORTHO05D007719 4.3e-53 211.8 161 65.8
unitig_32.g11202 Utricularia gibba HOM05D006215 ORTHO05D007719 4.3e-53 211.8 133 75.2
CARHR069510 Cardamine hirsuta HOM05D006215 ORTHO05D007719 7.3e-53 211.1 133 76.7
FAN25G2739 Fragaria x ananassa HOM05D006215 ORTHO05D007719 7.3e-53 211.1 161 64.6
ECA233G5922 Erigeron canadensis HOM05D000114 ORTHO05D000075 9.5e-53 210.7 133 75.2
CAN.G311.58 Capsicum annuum HOM05D006215 ORTHO05D007719 1.2e-52 210.3 133 75.2
BcaC08g47309 Brassica carinata HOM05D006215 ORTHO05D007719 2.1e-52 209.5 133 76.7
HanXRQChr13g0386921 Helianthus annuus HOM05D006215 ORTHO05D007719 2.1e-52 209.5 133 75.2
CDE04G3084 Ceratophyllum demersum HOM05D006215 ORTHO05D007719 8.9e-51 204.1 133 72.2
HPP92_025438 Vanilla planifolia HOM05D006215 ORTHO05D007719 1.2e-50 203.8 133 70.7
SalBow7G2905 Salvia bowleyana HOM05D006215 ORTHO05D007719 5.8e-50 201.4 189 57.1
CANSAT80G2378 Cannabis sativa HOM05D006215 ORTHO05D007719 3.7e-49 198.7 136 70.6
AUR62013912 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.2e-48 195.7 131 70.2
Aqoxy5G01831 Aquilegia oxysepala HOM05D006215 ORTHO05D007719 1.2e-47 193.7 134 67.2
Oeu033622.1 Olea europaea HOM05D006215 ORTHO05D007719 1.6e-47 193.4 133 67.7
Hund01696 Selenicereus undatus HOM05D006215 ORTHO05D007719 2.0e-47 193.0 134 67.9
Zm00001eb209250 Zea mays HOM05D006215 ORTHO05D007719 7.8e-47 191.0 132 64.4
ATR1088G027 Amborella trichopoda HOM05D006215 ORTHO05D007719 1.1e-45 187.2 134 69.4
PSO339G6481 Papaver somniferum HOM05D006215 ORTHO05D007719 7.3e-45 184.5 133 68.4
Rhsim06G0015300 Rhododendron simsii HOM05D006215 ORTHO05D007719 1.4e-43 180.3 162 61.1
PSO384G0480 Papaver somniferum HOM05D006215 ORTHO05D007719 3.1e-43 179.1 133 66.9
ClCG05G015490 Citrullus lanatus HOM05D006215 ORTHO05D007719 6.8e-43 177.9 133 69.9
Sc15g0004750 Simmondsia chinensis HOM05D006215 ORTHO05D007719 7.1e-40 167.9 123 64.2
arahy.Tifrunner.gnm1.ann1.SEC0EX Arachis hypogaea HOM05D006215 ORTHO05D007719 1.6e-39 166.8 122 77.0
Os02g0120400 Oryza sativa ssp. japonica HOM05D006215 ORTHO05D007719 1.7e-38 163.3 99 72.7
Actinidia15453 Actinidia chinensis HOM05D006215 ORTHO05D007719 5.1e-38 161.8 133 61.7
PGR083G2507 Punica granatum HOM05D006215 ORTHO05D007719 2.1e-36 156.4 140 61.4
AUR62018279 Chenopodium quinoa HOM05D006215 ORTHO05D007719 3.6e-36 155.6 103 68.0
Actinidia17011 Actinidia chinensis HOM05D006215 ORTHO05D007719 4.7e-36 155.2 83 84.3
Peaxi162Scf00860g00212 Petunia axillaris HOM05D006215 ORTHO05D007719 8.9e-35 151.0 133 58.6
Cc10_g01280 Coffea canephora HOM05D006215 ORTHO05D007719 1.2e-34 150.6 89 70.8
Pp3c20_3890 Physcomitrium patens HOM05D006215 ORTHO05D007719 4.4e-34 148.7 127 55.1
Haze_22683 Corylus avellana HOM05D006215 ORTHO05D007719 1.7e-33 146.7 104 68.3
SMO367G0408 Selaginella moellendorffii HOM05D006215 ORTHO05D007719 4.9e-33 145.2 130 52.3
SHI08014 Sapria himalayana HOM05D006215 ORTHO05D007719 1.1e-32 144.1 89 75.3
Aa31LG4G6130 Aethionema arabicum HOM05D006215 ORTHO05D007719 7.1e-32 141.4 89 75.3
Mapoly0001s0313 Marchantia polymorpha HOM05D006215 ORTHO05D007719 1.6e-31 140.2 129 51.2
CANSAT25G3730 Cannabis sativa HOM05D006215 ORTHO05D007719 7.8e-31 137.9 94 68.1
TAR625G0502 Trochodendron aralioides HOM05D006215 ORTHO05D007719 3.0e-30 136.0 103 64.1
FAN21G0515 Fragaria x ananassa HOM05D006215 ORTHO05D007719 6.6e-30 134.8 110 59.1
Duzib093G1443 Durio zibethinus HOM05D006215 ORTHO05D007719 8.6e-30 134.4 86 73.3
Ah.06g187190 Amaranthus hybridus HOM05D006215 ORTHO05D007719 1.6e-28 130.2 110 60.9
Medtr6g083100 Medicago truncatula HOM05D006215 ORTHO05D007719 2.6e-26 122.9 116 59.5
SEGI_18034 Sequoiadendron giganteum HOM05D006215 ORTHO05D007719 2.9e-25 119.4 85 63.5
AagrBONN_evm.TU.Sc2ySwM_117.1002 Anthoceros agrestis HOM05D006215 ORTHO05D007719 9.3e-24 114.4 113 51.3
Glyma.02G160800 Glycine max HOM05D006215 ORTHO05D007719 1.2e-23 114.0 62 83.9
Carub.0005s0222 Capsella rubella HOM05D006215 ORTHO05D007719 3.3e-21 105.9 67 79.1
CBR_g54848 Chara braunii HOM05D006215 ORTHO05D007719 4.9e-17 92.0 88 54.5
BolC6t40028H Brassica oleracea HOM05D006215 ORTHO05D007719 4.2e-16 89.0 84 58.3
Lsat_1_v5_gn_4_111221 Lactuca sativa HOM05D006215 ORTHO05D007719 9.3e-16 87.8 51 78.4
Eucgr.F03727 Eucalyptus grandis HOM05D006215 ORTHO05D007719 9.6e-13 77.8 46 78.3
Cc10_g01290 Coffea canephora HOM05D006215 ORTHO05D007719 1.1e-11 74.3 46 73.9
MD11G1262900 Malus domestica HOM05D006215 ORTHO05D007719 4.5e-10 68.9 39 87.2
BcaC03g15638 Brassica carinata HOM05D006215 ORTHO05D007719 7.6e-10 68.2 82 51.2
A02p20380 Brassica napus HOM05D006215 ORTHO05D007719 1.7e-09 67.0 48 68.8


User provided reference genes

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