Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 4.3e-95 351.3 173 100.0
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.9e-71 272.7 309 52.4
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 3.6e-70 268.5 309 51.5
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 2.9e-67 258.8 309 49.2
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 9.3e-66 253.8 307 49.5
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 4.8e-62 241.5 309 46.9
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 2.0e-60 236.1 309 46.0
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 5.8e-60 234.6 340 43.2
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 1.0e-59 233.8 315 46.3
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.7e-59 233.0 309 45.3
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 6.0e-57 224.6 254 46.5
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.3e-56 222.6 309 42.1
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 3.0e-56 222.2 309 42.7
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 3.0e-56 222.2 309 42.7
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 6.7e-56 221.1 307 42.7
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 8.7e-56 220.7 304 43.4
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.1e-55 220.3 309 43.0
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 2.5e-55 219.2 305 43.3
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 2.5e-55 219.2 254 47.2
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 2.5e-55 219.2 309 42.7
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 2.5e-55 219.2 309 43.4
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 4.3e-55 218.4 308 42.2
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 1.3e-54 216.9 284 43.7
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.6e-54 216.5 310 40.6
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 2.1e-54 216.1 309 41.1
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.1e-54 216.1 309 42.4
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 2.8e-54 215.7 310 41.3
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 3.7e-54 215.3 309 42.7
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 6.2e-54 214.5 260 46.5
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 8.2e-54 214.2 306 42.2
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.4e-53 213.4 306 42.2
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 2.4e-53 212.6 265 44.5
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 3.1e-53 212.2 310 41.3
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 3.1e-53 212.2 308 41.9
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 3.1e-53 212.2 306 41.8
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 4.1e-53 211.8 302 42.4
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 4.1e-53 211.8 304 42.1
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 5.3e-53 211.5 309 41.1
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 9.0e-53 210.7 303 41.6
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 9.0e-53 210.7 315 40.6
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 1.5e-52 209.9 306 39.5
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.5e-52 209.9 299 41.5
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 2.0e-52 209.5 309 40.1
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 2.6e-52 209.1 306 40.8
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 4.5e-52 208.4 315 40.6
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 4.5e-52 208.4 305 41.3
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 4.5e-52 208.4 305 40.0
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 5.8e-52 208.0 305 41.6
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 1.0e-51 207.2 303 40.9
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 2.9e-51 205.7 319 39.5
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 3.8e-51 205.3 328 38.1
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 5.0e-51 204.9 302 39.4
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.9e-50 203.0 310 40.0
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 2.5e-50 202.6 306 39.2
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 2.5e-50 202.6 305 40.0
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 4.2e-50 201.8 242 46.7
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 4.2e-50 201.8 297 40.1
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 4.2e-50 201.8 310 39.7
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 7.1e-50 201.1 315 39.4
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 9.3e-50 200.7 302 39.7
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.2e-49 200.3 310 39.4
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.2e-49 200.3 307 41.0
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 1.6e-49 199.9 310 39.4
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.6e-49 199.9 305 39.7
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 2.7e-49 199.1 305 39.7
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 2.7e-49 199.1 301 38.2
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 3.5e-49 198.7 295 39.3
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 3.5e-49 198.7 295 39.7
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 4.6e-49 198.4 306 38.2
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 4.6e-49 198.4 308 38.0
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 6.1e-49 198.0 305 37.4
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 1.0e-48 197.2 235 47.2
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 1.3e-48 196.8 322 38.8
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 1.3e-48 196.8 329 38.6
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.8e-48 196.4 310 38.4
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.8e-48 196.4 296 39.5
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 3.0e-48 195.7 294 39.5
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 3.0e-48 195.7 305 38.0
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 3.0e-48 195.7 333 36.9
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 5.1e-48 194.9 340 36.5
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 6.7e-48 194.5 280 41.8
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 6.7e-48 194.5 307 39.1
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 1.5e-47 193.4 305 38.0
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 1.9e-47 193.0 295 38.0
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.9e-47 193.0 305 38.4
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 1.9e-47 193.0 306 38.2
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 2.5e-47 192.6 305 37.0
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 1.3e-46 190.3 305 37.4
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 1.3e-46 190.3 270 42.2
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 2.2e-46 189.5 334 36.8
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 6.3e-46 188.0 304 37.8
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 1.5e-44 183.3 307 35.5
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.2e-43 179.5 160 60.0
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 5.0e-43 178.3 123 69.1
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 6.5e-43 177.9 121 71.1
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 8.5e-43 177.6 123 70.7
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 1.1e-42 177.2 367 33.2
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 1.4e-42 176.8 123 69.9
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.6e-41 172.2 136 61.8
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 5.1e-40 168.3 111 72.1
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 2.5e-39 166.0 122 68.0
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 5.7e-39 164.9 118 66.9
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.7e-38 163.3 320 33.4
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 5.9e-36 154.8 131 59.5
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 5.9e-36 154.8 316 34.8
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 6.5e-35 151.4 280 37.1
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 1.1e-34 150.6 114 63.2
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 2.7e-33 146.0 123 62.6
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 6.7e-32 141.4 298 33.2
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 1.5e-31 140.2 292 31.8
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 7.4e-31 137.9 271 32.8
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 2.6e-28 129.4 87 70.1
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 3.5e-28 129.0 151 47.0
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 9.4e-26 120.9 83 68.7
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.7e-22 110.2 155 42.6
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 2.2e-22 109.8 85 56.5
arahy.Tifrunner.gnm1.ann1.CIDL5D Arachis hypogaea HOM05D005792 ORTHO05D007171 1.8e-21 106.7 64 75.0
Phvul.009G020900 Phaseolus vulgaris HOM05D005792 ORTHO05D007171 2.4e-21 106.3 64 75.0
Oeu021471.1 Olea europaea HOM05D005792 ORTHO05D007171 5.9e-20 101.7 64 73.4
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 1.9e-18 96.7 82 53.7
TAR625G0970 Trochodendron aralioides HOM05D005792 ORTHO05D007171 9.4e-18 94.4 64 65.6
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 1.2e-17 94.0 64 65.6
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.2e-17 94.0 103 48.5
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.7e-17 92.8 176 33.5
MSTRG.25290 Avicennia marina HOM05D005792 ORTHO05D007171 3.6e-17 92.4 64 67.2
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 5.2e-16 88.6 81 58.0
CDE05G1591 Ceratophyllum demersum HOM05D005792 ORTHO05D007171 2.0e-15 86.7 62 62.9
Sabra02G0010700 Salix brachista HOM05D000201 ORTHO05D000490 7.5e-15 84.7 62 59.7
Zm00001eb321160 Zea mays HOM05D005792 ORTHO05D007171 9.1e-13 77.8 90 45.6
COL.COLO4_12452 Corchorus olitorius HOM05D005792 ORTHO05D007171 1.3e-11 73.9 76 51.3
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 4.2e-10 68.9 80 50.0
Actinidia17028 Actinidia chinensis HOM05D005792 ORTHO05D007171 5.5e-10 68.6 64 53.1
ATR0661G053 Amborella trichopoda HOM05D005792 ORTHO05D007171 3.6e-09 65.9 45 62.2


User provided reference genes

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