Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38106 Trifolium pratense HOM05D002849 ORTHO05D009472 1.3e-52 209.5 111 100.0
Ca_15446_v3 Cicer arietinum L. HOM05D002849 ORTHO05D009472 1.6e-42 176.0 111 84.7
Medtr3g115060 Medicago truncatula HOM05D002849 ORTHO05D009472 3.1e-38 161.8 106 82.1
Psat5g010840 Pisum sativum HOM05D002849 ORTHO05D009472 4.9e-36 154.5 111 77.5
Glyma.04G019400 Glycine max HOM05D002849 ORTHO05D009472 4.3e-32 141.4 109 71.6
Glyma.06G019700 Glycine max HOM05D002849 ORTHO05D009472 2.1e-31 139.0 109 70.6
Potri.002G013601 Populus trichocarpa HOM05D002849 ORTHO05D009472 8.1e-31 137.1 104 71.2
VMungo1309G2595 Vigna mungo HOM05D002849 ORTHO05D009472 8.1e-31 137.1 107 68.2
ClCG05G015240 Citrullus lanatus HOM05D002849 ORTHO05D009472 2.4e-30 135.6 93 76.3
Phvul.009G021100 Phaseolus vulgaris HOM05D002849 ORTHO05D009472 3.1e-30 135.2 107 67.3
Lj1g0005069 Lotus japonicus HOM05D002849 ORTHO05D009472 4.0e-30 134.8 94 72.3
TAR381G0186 Trochodendron aralioides HOM05D002849 ORTHO05D009472 1.2e-29 133.3 107 66.4
Sabra02G0010600 Salix brachista HOM05D002849 ORTHO05D009472 2.6e-29 132.1 104 69.2
Sed0019383 Sechium edule HOM05D002849 ORTHO05D009472 2.6e-29 132.1 107 66.4
Haze_22739 Corylus avellana HOM05D002849 ORTHO05D007186 4.5e-29 131.3 109 63.3
Cpa.g.sc26.233 Carica papaya HOM05D002849 ORTHO05D007186 7.6e-29 130.6 103 67.0
arahy.Tifrunner.gnm1.ann1.501GHP Arachis hypogaea HOM05D002849 ORTHO05D009472 9.9e-29 130.2 104 64.4
Cfa014031 Carpinus fangiana HOM05D002849 ORTHO05D009472 9.9e-29 130.2 109 66.1
MD08G1004900 Malus domestica HOM05D002849 ORTHO05D009472 9.9e-29 130.2 102 65.7
Ciclev10002910m.g Citrus clementina HOM05D002849 ORTHO05D009472 2.9e-28 128.6 111 66.7
Nn5g27128 Nelumbo nucifera HOM05D002849 ORTHO05D009472 6.4e-28 127.5 103 65.0
QL02p013572 Quercus lobata HOM05D002849 ORTHO05D009472 1.1e-27 126.7 109 64.2
vmacro04390 Vaccinium macrocarpon HOM05D002849 ORTHO05D009472 1.4e-27 126.3 111 65.8
RcHm_v2.0_Chr6g0303941 Rosa chinensis HOM05D002849 ORTHO05D009472 1.9e-27 125.9 104 65.4
CsaV3_4G037080 Cucumis sativus L. HOM05D002849 ORTHO05D009472 2.4e-27 125.6 94 70.2
CiPaw.08G071000 Carya illinoinensis HOM05D002849 ORTHO05D009472 3.2e-27 125.2 108 61.1
GSVIVG01008706001 Vitis vinifera HOM05D000148 ORTHO05D000081 3.2e-27 125.2 108 63.0
Sc26g0004580 Simmondsia chinensis HOM05D002849 ORTHO05D009472 4.2e-27 124.8 93 67.7
Ah.00g000480 Amaranthus hybridus HOM05D002849 ORTHO05D009472 5.5e-27 124.4 93 68.8
Lalb_Chr11g0061731 Lupinus albus HOM05D002849 ORTHO05D009472 5.5e-27 124.4 104 60.6
Rhsim07G0252900 Rhododendron simsii HOM05D002849 ORTHO05D009472 5.5e-27 124.4 111 65.8
Prupe.1G357000 Prunus persica HOM05D002849 ORTHO05D009472 1.2e-26 123.2 111 64.0
CANSAT80G0154 Cannabis sativa HOM05D002849 ORTHO05D009472 2.1e-26 122.5 101 63.4
CANSAT80G2323 Cannabis sativa HOM05D002849 ORTHO05D009472 2.1e-26 122.5 101 63.4
Aqoxy5G01070 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 3.5e-26 121.7 88 69.3
Thecc.08G055000 Theobroma cacao HOM05D002849 ORTHO05D009472 3.5e-26 121.7 108 63.0
Atru.chr13.177 Acer truncatum HOM05D002849 ORTHO05D009472 6.0e-26 120.9 109 61.5
AUR62013835 Chenopodium quinoa HOM05D002849 ORTHO05D009472 6.0e-26 120.9 109 61.5
AUR62036770 Chenopodium quinoa HOM05D002849 ORTHO05D009472 6.0e-26 120.9 109 61.5
CSS0028449 Camellia sinensis var. sinensis HOM05D002849 ORTHO05D009472 1.0e-25 120.2 103 65.0
Lsat_1_v5_gn_8_28281 Lactuca sativa HOM05D002849 ORTHO05D009472 1.0e-25 120.2 104 63.5
MELO3C017006.2 Cucumis melo HOM05D002849 ORTHO05D009472 1.8e-25 119.4 94 66.0
HanXRQChr08g0215861 Helianthus annuus HOM05D002849 ORTHO05D009472 1.8e-25 119.4 100 63.0
Aqoxy5G01064 Aquilegia oxysepala HOM05D002849 ORTHO05D009472 3.0e-25 118.6 88 68.2
VMungo0540G0079 Vigna mungo HOM05D002849 ORTHO05D009472 3.0e-25 118.6 105 62.9
Dinv31914 Davidia involucrata HOM05D000894 ORTHO05D002325 3.9e-25 118.2 109 59.6
CAN.G311.94 Capsicum annuum HOM05D002849 ORTHO05D009472 5.1e-25 117.9 104 61.5
HanXRQChr08g0215951 Helianthus annuus HOM05D002849 ORTHO05D009472 5.1e-25 117.9 100 62.0
MD11G1257900 Malus domestica HOM05D002849 ORTHO05D009472 6.7e-25 117.5 108 58.3
Manes.05G140800 Manihot esculenta HOM05D002849 ORTHO05D009472 1.1e-24 116.7 102 64.7
EL10Ac2g02687 Beta vulgaris HOM05D002849 ORTHO05D009472 1.5e-24 116.3 112 59.8
PGSC0003DMG400009966 Solanum tuberosum HOM05D002849 ORTHO05D009472 1.5e-24 116.3 104 59.6
Duzib093G0992 Durio zibethinus HOM05D002849 ORTHO05D009472 3.3e-24 115.2 109 60.6
Gorai.010G000900 Gossypium raimondii HOM05D002849 ORTHO05D009472 4.3e-24 114.8 110 59.1
Solyc12g094480.3 Solanum lycopersicum HOM05D002849 ORTHO05D009472 4.3e-24 114.8 100 62.0
Sopen12g031370 Solanum pennellii HOM05D002849 ORTHO05D009472 4.3e-24 114.8 100 62.0
Nitab4.5_0000699g0200 Nicotiana tabacum HOM05D002849 ORTHO05D009472 5.6e-24 114.4 101 62.4
TWI36G1301 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 5.6e-24 114.4 109 60.6
Actinidia37963 Actinidia chinensis HOM05D002849 ORTHO05D009472 7.4e-24 114.0 92 67.4
ECA233G1055 Erigeron canadensis HOM05D002849 ORTHO05D009472 7.4e-24 114.0 94 66.0
Gohir.A06G000700 Gossypium hirsutum HOM05D002849 ORTHO05D009472 7.4e-24 114.0 110 59.1
PGR102G2189 Punica granatum HOM05D002849 ORTHO05D009472 7.4e-24 114.0 101 60.4
Nitab4.5_0003149g0010 Nicotiana tabacum HOM05D002849 ORTHO05D009472 1.3e-23 113.2 104 60.6
Sopen04g035780 Solanum pennellii HOM05D002849 ORTHO05D009472 2.1e-23 112.5 102 58.8
Peaxi162Scf00174g01410 Petunia axillaris HOM05D002849 ORTHO05D009472 4.8e-23 111.3 99 62.6
PGSC0003DMG400029324 Solanum tuberosum HOM05D002849 ORTHO05D009472 4.8e-23 111.3 100 60.0
unitig_82.g27114 Utricularia gibba HOM05D002849 ORTHO05D009472 4.8e-23 111.3 109 57.8
Nitab4.5_0000588g0290 Nicotiana tabacum HOM05D002849 ORTHO05D009472 6.2e-23 110.9 104 59.6
COL.COLO4_21616 Corchorus olitorius HOM05D002849 ORTHO05D009472 1.1e-22 110.2 109 58.7
Cc10_g00900 Coffea canephora HOM05D002849 ORTHO05D009472 1.8e-22 109.4 98 59.2
Actinidia29779 Actinidia chinensis HOM05D002849 ORTHO05D009472 6.9e-22 107.5 81 69.1
AL1G33360 Arabidopsis lyrata HOM05D002849 ORTHO05D009472 6.9e-22 107.5 115 53.9
Thhalv10009140m.g Eutrema salsugineum HOM05D002849 ORTHO05D009472 6.9e-22 107.5 86 62.8
Carub.0005s0958 Capsella rubella HOM05D002849 ORTHO05D009472 9.0e-22 107.1 115 52.2
Sp5g31300 Schrenkiella parvula HOM05D002849 ORTHO05D009472 9.0e-22 107.1 79 67.1
CDE04G0501 Ceratophyllum demersum HOM05D002849 ORTHO05D009472 1.2e-21 106.7 91 60.4
TWI56G1224 Tripterygium wilfordii HOM05D002849 ORTHO05D009472 1.2e-21 106.7 109 56.9
Migut.C00918 Erythranthe guttata HOM05D002849 ORTHO05D009472 2.0e-21 105.9 109 54.1
FAN20G1236 Fragaria x ananassa HOM05D002849 ORTHO05D009472 2.0e-21 105.9 87 65.5
DCAR_016751 Daucus carota HOM05D002849 ORTHO05D009472 2.6e-21 105.5 103 57.3
Eucgr.H01281 Eucalyptus grandis HOM05D002849 ORTHO05D009472 2.6e-21 105.5 111 57.7
CARHR020890 Cardamine hirsuta HOM05D002849 ORTHO05D009472 3.4e-21 105.1 115 52.2
Carub.0001s1990 Capsella rubella HOM05D002849 ORTHO05D009472 5.8e-21 104.4 115 51.3
AT1G20430 Arabidopsis thaliana HOM05D002849 ORTHO05D009472 2.2e-20 102.4 115 52.2
Sp1g18150 Schrenkiella parvula HOM05D002849 ORTHO05D009472 2.9e-20 102.1 115 50.4
Aa31LG7G4740 Aethionema arabicum HOM05D002849 ORTHO05D009472 6.5e-20 100.9 113 51.3
BcaNung03382 Brassica carinata HOM05D002849 ORTHO05D009472 1.9e-19 99.4 115 50.4
A07p15680 Brassica napus HOM05D002849 ORTHO05D009472 1.9e-19 99.4 115 50.4
A07p15790 Brassica napus HOM05D002849 ORTHO05D009472 1.9e-19 99.4 115 50.4
C07p23030 Brassica napus HOM05D002849 ORTHO05D009472 1.9e-19 99.4 115 50.4
BolC7t42844H Brassica oleracea HOM05D002849 ORTHO05D009472 1.9e-19 99.4 115 50.4
BraA07t29306Z Brassica rapa HOM05D002849 ORTHO05D009472 1.9e-19 99.4 115 50.4
SGA_v2.0_scaffold275G46557 Striga asiatica HOM05D002849 ORTHO05D009472 1.9e-19 99.4 92 57.6
ATR0661G222 Amborella trichopoda HOM05D002849 ORTHO05D009472 2.5e-19 99.0 107 50.5
BcaB03g14321 Brassica carinata HOM05D002849 ORTHO05D009472 2.5e-19 99.0 115 50.4
BcaB07g32046 Brassica carinata HOM05D002849 ORTHO05D009472 5.5e-19 97.8 115 50.4
THA.LOC104811451 Tarenaya hassleriana HOM05D002849 ORTHO05D009472 2.1e-18 95.9 99 53.5
SHI08004 Sapria himalayana HOM05D002849 ORTHO05D009472 3.9e-17 91.7 85 54.1
Lalb_Chr01g0008401 Lupinus albus HOM05D002849 ORTHO05D009472 6.7e-17 90.9 95 52.6
SalBow7G2120 Salvia bowleyana HOM05D002849 ORTHO05D009472 1.1e-14 83.6 86 47.7
Zm00001eb373140 Zea mays HOM05D002849 ORTHO05D009472 1.7e-12 76.3 83 44.6
SEGI_39053 Sequoiadendron giganteum HOM05D002849 ORTHO05D009472 5.5e-11 71.2 90 45.6
arahy.Tifrunner.gnm1.ann1.PLB5QN Arachis hypogaea HOM05D003604 ORTHO05D004110 1.2e-10 70.1 90 48.9
arahy.Tifrunner.gnm1.ann1.H4T2PX Arachis hypogaea HOM05D002849 ORTHO05D009472 1.6e-10 69.7 73 53.4
Os06g0213900 Oryza sativa ssp. japonica HOM05D002849 ORTHO05D009472 1.0e-09 67.0 89 37.1
Hma1.2p1_1523F.1_g288770 Hydrangea macrophylla HOM05D002849 ORTHO05D009472 3.7e-07 58.5 53 54.7


User provided reference genes

Program Settings