Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38103 Trifolium pratense HOM05D006709 ORTHO05D008329 1.9e-50 202.2 100 100.0
Psat5g008400 Pisum sativum HOM05D006709 ORTHO05D008329 3.7e-43 177.9 100 89.0
Medtr3g116150 Medicago truncatula HOM05D006709 ORTHO05D008329 3.9e-40 167.9 99 82.8
Phvul.009G008700 Phaseolus vulgaris HOM05D006709 ORTHO05D008329 7.3e-39 163.7 101 79.2
Ca_15382_v3 Cicer arietinum L. HOM05D006709 ORTHO05D008329 9.5e-39 163.3 100 79.0
VMungo1309G2593 Vigna mungo HOM05D006709 ORTHO05D008329 1.2e-38 162.9 101 79.2
Glyma.04G014200 Glycine max HOM05D006709 ORTHO05D008329 1.6e-38 162.5 101 79.2
arahy.Tifrunner.gnm1.ann1.ZQQY3F Arachis hypogaea HOM05D006709 ORTHO05D008329 8.1e-38 160.2 97 76.3
arahy.Tifrunner.gnm1.ann1.6A59KD Arachis hypogaea HOM05D006709 ORTHO05D008329 1.4e-37 159.5 97 76.3
Dinv05492 Davidia involucrata HOM05D006709 ORTHO05D008329 2.0e-36 155.6 95 75.8
Actinidia15528 Actinidia chinensis HOM05D006709 ORTHO05D008329 3.4e-36 154.8 95 75.8
Actinidia17082 Actinidia chinensis HOM05D006709 ORTHO05D008329 4.4e-36 154.5 95 74.7
Lj1g0007500 Lotus japonicus HOM05D006709 ORTHO05D008329 4.4e-36 154.5 94 79.8
vmacro21761 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 4.4e-36 154.5 94 74.5
GSVIVG01013436001 Vitis vinifera HOM05D006709 ORTHO05D008329 1.7e-35 152.5 96 71.9
MBI04_g31214_MAGBIO Magnolia biondii HOM05D006709 ORTHO05D008329 1.9e-34 149.1 91 74.7
QL02p015873 Quercus lobata HOM05D006709 ORTHO05D008329 1.9e-34 149.1 99 69.7
Hund05070 Selenicereus undatus HOM05D006709 ORTHO05D008329 1.9e-34 149.1 91 74.7
Lalb_Chr03g0035821 Lupinus albus HOM05D006709 ORTHO05D008329 2.4e-34 148.7 97 74.2
CSS0027441 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 3.2e-34 148.3 92 73.9
Lalb_Chr04g0257801 Lupinus albus HOM05D006709 ORTHO05D008329 4.2e-34 147.9 97 72.2
Manes.18G001600 Manihot esculenta HOM05D006709 ORTHO05D008329 4.2e-34 147.9 93 74.2
Thecc.08G099000 Theobroma cacao HOM05D006709 ORTHO05D008329 4.2e-34 147.9 98 72.4
CSS0014821 Camellia sinensis var. sinensis HOM05D006709 ORTHO05D008329 5.4e-34 147.5 92 73.9
Ciclev10002952m.g Citrus clementina HOM05D006709 ORTHO05D008329 5.4e-34 147.5 95 74.7
Potri.005G257100 Populus trichocarpa HOM05D006709 ORTHO05D008329 5.4e-34 147.5 95 70.5
PGR031G3816 Punica granatum HOM05D006709 ORTHO05D008329 9.2e-34 146.7 88 78.4
Cpa.g.sc26.6 Carica papaya HOM05D006709 ORTHO05D008329 1.2e-33 146.4 93 75.3
MD06G1003100 Malus domestica HOM05D006709 ORTHO05D008329 1.2e-33 146.4 91 78.0
Carub.0004s1522 Capsella rubella HOM05D006709 ORTHO05D008329 1.6e-33 146.0 100 70.0
Prupe.1G298300 Prunus persica HOM05D006709 ORTHO05D008329 2.1e-33 145.6 91 78.0
MELO3C016084.2 Cucumis melo HOM05D006709 ORTHO05D008329 3.5e-33 144.8 89 76.4
Ah.11g042070 Amaranthus hybridus HOM05D006709 ORTHO05D008329 4.6e-33 144.4 92 73.9
Solyc04g082800.3 Solanum lycopersicum HOM05D006709 ORTHO05D008329 4.6e-33 144.4 91 73.6
Sopen04g036440 Solanum pennellii HOM05D006709 ORTHO05D008329 4.6e-33 144.4 91 73.6
TWI56G0059 Tripterygium wilfordii HOM05D006709 ORTHO05D008329 4.6e-33 144.4 101 71.3
CAN.G1330.15 Capsicum annuum HOM05D006709 ORTHO05D008329 6.0e-33 144.1 91 71.4
CARHR127610 Cardamine hirsuta HOM05D006709 ORTHO05D008329 6.0e-33 144.1 94 72.3
Lj4A4T20 Lonicera japonica HOM05D006709 ORTHO05D008329 6.0e-33 144.1 98 71.4
ClCG07G009870 Citrullus lanatus HOM05D006709 ORTHO05D008329 7.8e-33 143.7 90 74.4
Duzib151G1059 Durio zibethinus HOM05D006709 ORTHO05D008329 7.8e-33 143.7 97 71.1
Gohir.A09G212700 Gossypium hirsutum HOM05D006709 ORTHO05D008329 7.8e-33 143.7 96 69.8
Gohir.D09G206300 Gossypium hirsutum HOM05D006709 ORTHO05D008329 7.8e-33 143.7 96 69.8
Gorai.006G230200 Gossypium raimondii HOM05D006709 ORTHO05D008329 7.8e-33 143.7 96 69.8
Oeu035869.2 Olea europaea HOM05D006709 ORTHO05D008329 7.8e-33 143.7 96 69.8
RcHm_v2.0_Chr7g0216881 Rosa chinensis HOM05D006709 ORTHO05D008329 7.8e-33 143.7 102 68.6
Sed0015665 Sechium edule HOM05D006709 ORTHO05D008329 7.8e-33 143.7 89 76.4
Aa31LG9G13520 Aethionema arabicum HOM05D006709 ORTHO05D008329 1.0e-32 143.3 93 68.8
CANSAT78G0412 Cannabis sativa HOM05D006709 ORTHO05D008329 1.0e-32 143.3 90 73.3
Haze_22867 Corylus avellana HOM05D006709 ORTHO05D008329 1.0e-32 143.3 98 71.4
Atru.chr13.44 Acer truncatum HOM05D006709 ORTHO05D008329 1.7e-32 142.5 95 71.6
AL4G29260 Arabidopsis lyrata HOM05D006709 ORTHO05D008329 2.3e-32 142.1 100 71.0
BcaB01g03928 Brassica carinata HOM05D006709 ORTHO05D008329 3.0e-32 141.7 94 71.3
FvH4_5g26200 Fragaria vesca HOM05D006709 ORTHO05D008329 3.0e-32 141.7 102 68.6
FAN08G1650 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.0e-32 141.7 102 68.6
FAN13G1766 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.0e-32 141.7 102 68.6
Eucgr.F03607 Eucalyptus grandis HOM05D006709 ORTHO05D008329 3.9e-32 141.4 91 70.3
BcaC01g05832 Brassica carinata HOM05D006709 ORTHO05D008329 5.1e-32 141.0 100 69.0
C03p21970 Brassica napus HOM05D006709 ORTHO05D008329 5.1e-32 141.0 100 69.0
BolC3t14580H Brassica oleracea HOM05D006709 ORTHO05D008329 5.1e-32 141.0 100 69.0
BraA03t11140Z Brassica rapa HOM05D006709 ORTHO05D008329 5.1e-32 141.0 100 69.0
Thhalv10017474m.g Eutrema salsugineum HOM05D006709 ORTHO05D008329 6.6e-32 140.6 100 69.0
Peaxi162Scf00385g00310 Petunia axillaris HOM05D006709 ORTHO05D008329 6.6e-32 140.6 91 71.4
Nitab4.5_0007096g0020 Nicotiana tabacum HOM05D006709 ORTHO05D008329 8.7e-32 140.2 91 70.3
SalBow7G4607 Salvia bowleyana HOM05D006709 ORTHO05D008329 8.7e-32 140.2 88 71.6
A03p18800 Brassica napus HOM05D006709 ORTHO05D008329 1.1e-31 139.8 100 68.0
Migut.C00352 Erythranthe guttata HOM05D006709 ORTHO05D008329 1.1e-31 139.8 94 69.1
ATR0605G117 Amborella trichopoda HOM05D006709 ORTHO05D008329 1.5e-31 139.4 91 69.2
EL10Ac1g01866 Beta vulgaris HOM05D006709 ORTHO05D008329 2.5e-31 138.7 92 70.7
FAN18G1826 Fragaria x ananassa HOM05D006709 ORTHO05D008329 2.5e-31 138.7 102 67.6
Sc15g0004050 Simmondsia chinensis HOM05D006709 ORTHO05D008329 3.3e-31 138.3 94 68.1
HanXRQChr12g0367591 Helianthus annuus HOM05D006709 ORTHO05D008329 5.6e-31 137.5 95 68.4
AT2G33585 Arabidopsis thaliana HOM05D006709 ORTHO05D008329 7.3e-31 137.1 90 72.2
PSO017G0586 Papaver somniferum HOM05D006709 ORTHO05D008329 7.3e-31 137.1 91 70.3
ECA233G3448 Erigeron canadensis HOM05D006709 ORTHO05D008329 1.3e-30 136.3 92 69.6
TAR628G1717 Trochodendron aralioides HOM05D006709 ORTHO05D008329 1.6e-30 136.0 81 76.5
Rhsim06G0002600 Rhododendron simsii HOM05D006709 ORTHO05D008329 2.1e-30 135.6 100 65.0
Duzib212G0839 Durio zibethinus HOM05D006709 ORTHO05D008329 3.6e-30 134.8 98 65.3
Glyma.06G014200 Glycine max HOM05D006709 ORTHO05D008329 3.6e-30 134.8 100 69.0
Lsat_1_v5_gn_9_48241 Lactuca sativa HOM05D006709 ORTHO05D008329 4.8e-30 134.4 91 69.2
unitig_37.g13048 Utricularia gibba HOM05D006709 ORTHO05D008329 4.8e-30 134.4 96 64.6
Hma1.2p1_0489F.1_g164140 Hydrangea macrophylla HOM05D006709 ORTHO05D008329 6.2e-30 134.0 92 69.6
Sabra05G0199000 Salix brachista HOM05D006709 ORTHO05D008329 6.2e-30 134.0 84 71.4
BolC4t27784H Brassica oleracea HOM05D006709 ORTHO05D008329 1.4e-29 132.9 90 68.9
BcaB06g28702 Brassica carinata HOM05D006709 ORTHO05D008329 1.8e-29 132.5 90 68.9
PGSC0003DMG400009925 Solanum tuberosum HOM05D006709 ORTHO05D008329 1.8e-29 132.5 89 70.8
C04p63090 Brassica napus HOM05D006709 ORTHO05D008329 2.4e-29 132.1 90 68.9
Lsat_1_v5_gn_8_26041 Lactuca sativa HOM05D006709 ORTHO05D008329 2.4e-29 132.1 94 67.0
BcaC02g07804 Brassica carinata HOM05D006709 ORTHO05D008329 4.0e-29 131.3 90 68.9
A04p25850 Brassica napus HOM05D006709 ORTHO05D008329 4.0e-29 131.3 90 68.9
BraA04t18087Z Brassica rapa HOM05D006709 ORTHO05D008329 4.0e-29 131.3 90 68.9
CDE05G2376 Ceratophyllum demersum HOM05D006709 ORTHO05D008329 4.0e-29 131.3 99 63.6
Os08g0512900 Oryza sativa ssp. japonica HOM05D006709 ORTHO05D008329 4.0e-29 131.3 83 69.9
Nn5g31057 Nelumbo nucifera HOM05D006709 ORTHO05D008329 9.0e-29 130.2 117 57.3
Oeu035760.1 Olea europaea HOM05D006709 ORTHO05D008329 4.4e-28 127.9 101 62.4
Sp4g15940 Schrenkiella parvula HOM05D006709 ORTHO05D008329 4.4e-28 127.9 84 71.4
Aqoxy5G00959 Aquilegia oxysepala HOM05D006709 ORTHO05D008329 5.8e-28 127.5 81 72.8
COL.COLO4_12285 Corchorus olitorius HOM05D006709 ORTHO05D008329 3.8e-27 124.8 90 65.6
Zm00001eb199960 Zea mays HOM05D006709 ORTHO05D008329 1.1e-26 123.2 91 65.9
CiPaw.07G132800 Carya illinoinensis HOM05D006709 ORTHO05D008329 4.2e-26 121.3 80 71.2
Cc10_g00210 Coffea canephora HOM05D006709 ORTHO05D008329 5.4e-26 120.9 83 66.3
HPP92_015749 Vanilla planifolia HOM05D006709 ORTHO05D008329 7.1e-26 120.6 87 66.7
SEGI_16420 Sequoiadendron giganteum HOM05D006709 ORTHO05D008329 1.2e-25 119.8 91 58.2
MSTRG.1007 Avicennia marina HOM05D006709 ORTHO05D008329 2.1e-22 109.0 80 63.8
FAN04G1417 Fragaria x ananassa HOM05D006709 ORTHO05D008329 3.1e-21 105.1 105 55.2
CsaV3_4G008460 Cucumis sativus L. HOM05D006709 ORTHO05D008329 4.0e-21 104.8 61 80.3
BcaC01g05833 Brassica carinata HOM05D006709 ORTHO05D008329 9.9e-20 100.1 92 57.6
AagrBONN_evm.TU.Sc2ySwM_344.3753 Anthoceros agrestis HOM05D006709 ORTHO05D008329 1.7e-19 99.4 85 52.9
Manes.05G128900 Manihot esculenta HOM05D006709 ORTHO05D008329 5.4e-18 94.4 71 63.4
Mapoly0015s0105 Marchantia polymorpha HOM05D006709 ORTHO05D008329 7.9e-17 90.5 88 51.1
DCAR_016802 Daucus carota HOM05D006709 ORTHO05D008329 7.4e-15 84.0 94 48.9
Pp3c1_9780 Physcomitrium patens HOM05D006709 ORTHO05D008329 5.3e-13 77.8 79 48.1
vmacro04272 Vaccinium macrocarpon HOM05D006709 ORTHO05D008329 3.4e-12 75.1 110 41.8
SHI07946 Sapria himalayana HOM05D006709 ORTHO05D008329 5.8e-12 74.3 66 59.1
SalBow1G7713 Salvia bowleyana HOM05D006709 ORTHO05D008329 2.9e-11 72.0 46 65.2
DCAR_023021 Daucus carota HOM05D006709 ORTHO05D008329 9.3e-10 67.0 69 52.2
SalBow8G3647 Salvia bowleyana HOM05D006709 ORTHO05D008329 1.0e-08 63.5 38 68.4


User provided reference genes

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