Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G38069 Trifolium pratense HOM05D004670 ORTHO05D014137 4.4e-49 198.0 126 100.0
TPR.G5228 Trifolium pratense HOM05D002798 ORTHO05D003052 1.4e-26 123.2 106 85.8
Medtr8g105450 Medicago truncatula HOM05D004670 ORTHO05D014137 6.4e-24 114.4 106 83.0
Medtr5g088900 Medicago truncatula HOM05D004670 ORTHO05D014137 3.2e-23 112.1 105 82.9
Medtr8g105355 Medicago truncatula HOM05D004670 ORTHO05D014137 1.3e-21 106.7 69 76.8
TPR.G25089 Trifolium pratense HOM05D004670 ORTHO05D014137 3.9e-21 105.1 69 72.5
Medtr1g102610 Medicago truncatula HOM05D004670 ORTHO05D014137 1.9e-20 102.8 71 74.6
TPR.G26507 Trifolium pratense HOM05D004670 ORTHO05D014137 1.3e-19 100.1 102 80.4
Medtr8g080260 Medicago truncatula HOM05D004670 ORTHO05D014137 7.6e-17 90.9 108 72.2
TPR.G17089 Trifolium pratense HOM05D004670 ORTHO05D014137 2.5e-12 75.9 35 100.0
AUR62008837 Chenopodium quinoa HOM05D004670 ORTHO05D008020 4.0e-10 68.6 62 56.5
AUR62044649 Chenopodium quinoa HOM05D004670 ORTHO05D008020 4.0e-10 68.6 62 56.5
TPR.G1241 Trifolium pratense HOM05D004670 ORTHO05D014137 9.0e-10 67.4 57 63.2
VMungo1080G1842 Vigna mungo HOM05D004670 ORTHO05D014137 5.8e-09 64.7 64 48.4
AUR62000265 Chenopodium quinoa HOM05D004670 ORTHO05D008020 9.9e-09 63.9 62 53.2
VMungo1215G2433 Vigna mungo HOM05D004670 ORTHO05D014137 4.9e-08 61.6 72 41.7
SGA_v2.0_scaffold52G18920 Striga asiatica HOM05D004670 ORTHO05D008020 1.1e-07 60.5 65 49.2
Medtr5g095150 Medicago truncatula HOM05D004670 ORTHO05D259135 1.9e-07 59.7 77 79.2
Haze_20607 Corylus avellana HOM05D004670 ORTHO05D008020 4.2e-07 58.5 52 57.7


User provided reference genes

Program Settings