Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 2.7e-75 285.4 160 100.0
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 3.4e-38 162.2 171 60.2
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 7.6e-38 161.0 161 60.9
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 3.5e-35 152.1 174 54.0
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 5.6e-33 144.8 160 53.8
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 2.8e-32 142.5 161 56.5
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 3.6e-32 142.1 163 54.0
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 1.1e-28 130.6 160 50.0
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 5.6e-25 118.2 115 54.8
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 2.8e-24 115.9 66 80.3
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 1.1e-23 114.0 166 47.0
Lalb_Chr19g0129331 Lupinus albus HOM05D005304 ORTHO05D004438 4.3e-17 92.0 66 69.7
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 1.3e-16 90.5 113 50.4
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 1.8e-15 86.7 73 57.5
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.8e-15 86.7 95 48.4
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 5.3e-15 85.1 73 61.6
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.5e-14 83.6 161 35.4
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 1.5e-14 83.6 113 46.9
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 2.0e-14 83.2 102 47.1
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 3.4e-14 82.4 98 46.9
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 4.5e-14 82.0 56 69.6
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 5.8e-14 81.6 101 45.5
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 7.6e-14 81.3 113 46.0
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 1.7e-13 80.1 94 47.9
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 1.7e-13 80.1 70 61.4
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 4.9e-13 78.6 82 57.3
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 6.5e-13 78.2 67 58.2
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 8.4e-13 77.8 83 54.2
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 8.4e-13 77.8 93 43.0
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 1.1e-12 77.4 105 45.7
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 1.4e-12 77.0 74 55.4
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.4e-12 77.0 60 56.7
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.9e-12 76.6 74 55.4
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.9e-12 76.6 81 50.6
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 1.9e-12 76.6 82 52.4
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 2.5e-12 76.3 76 51.3
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 2.5e-12 76.3 98 51.0
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.5e-12 76.3 98 51.0
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.5e-12 76.3 98 51.0
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 3.2e-12 75.9 95 47.4
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 3.2e-12 75.9 79 46.8
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 4.2e-12 75.5 95 47.4
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 4.2e-12 75.5 79 46.8
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 4.2e-12 75.5 104 44.2
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 5.5e-12 75.1 76 48.7
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.5e-12 75.1 98 44.9
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 7.1e-12 74.7 79 46.8
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 9.3e-12 74.3 70 57.1
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 1.6e-11 73.6 98 44.9
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 3.5e-11 72.4 88 51.1
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.5e-11 72.4 98 44.9
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 3.5e-11 72.4 98 44.9
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 4.6e-11 72.0 69 47.8
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 7.9e-11 71.2 71 49.3
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 1.0e-10 70.9 81 45.7
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.3e-10 69.7 81 46.9
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 2.3e-10 69.7 69 52.2
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 2.3e-10 69.7 70 51.4
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.0e-10 69.3 81 45.7
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 3.0e-10 69.3 75 46.7
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 5.1e-10 68.6 90 48.9
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 6.7e-10 68.2 93 44.1
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 8.7e-10 67.8 63 54.0
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 8.7e-10 67.8 60 51.7
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 1.1e-09 67.4 89 42.7
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 1.1e-09 67.4 89 42.7
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.1e-09 67.4 72 48.6
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 1.5e-09 67.0 94 40.4
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.5e-09 67.0 65 49.2
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.9e-09 66.6 81 44.4
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.9e-09 66.6 65 52.3
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 1.9e-09 66.6 73 43.8
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 3.3e-09 65.9 82 43.9
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 3.3e-09 65.9 91 41.8
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 5.7e-09 65.1 91 41.8
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 7.4e-09 64.7 88 40.9
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.3e-08 63.9 71 46.5
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.6e-08 63.5 64 48.4
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 2.8e-08 62.8 85 49.4
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 4.8e-08 62.0 63 49.2
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 4.8e-08 62.0 99 35.4
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 4.8e-08 62.0 68 51.5
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 6.3e-08 61.6 56 58.9
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 6.3e-08 61.6 80 45.0
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.3e-08 61.6 54 55.6
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 8.2e-08 61.2 60 50.0
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 8.2e-08 61.2 87 48.3
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 8.2e-08 61.2 62 46.8
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 8.2e-08 61.2 56 50.0
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 1.1e-07 60.8 95 37.9
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 1.1e-07 60.8 62 50.0
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 1.1e-07 60.8 88 43.2
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.8e-07 60.1 87 48.3
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.8e-07 60.1 54 53.7
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.4e-07 59.7 65 50.8
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 2.4e-07 59.7 56 51.8
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 3.1e-07 59.3 71 46.5
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 3.1e-07 59.3 63 46.0
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 4.1e-07 58.9 56 48.2
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 4.1e-07 58.9 91 42.9
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 5.3e-07 58.5 81 40.7
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 9.0e-07 57.8 56 53.6
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 9.0e-07 57.8 78 44.9
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.5e-06 57.0 65 40.0
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.5e-06 57.0 65 40.0
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.5e-06 57.0 66 40.9
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 1.5e-06 57.0 64 45.3
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 1.5e-06 57.0 54 53.7
Aqoxy4G02913 Aquilegia oxysepala HOM05D005967 ORTHO05D005174 2.0e-06 56.6 61 45.9
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 2.6e-06 56.2 68 44.1
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 2.6e-06 56.2 92 40.2
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 3.4e-06 55.8 87 42.5
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 5.9e-06 55.1 89 38.2
QL01p032269 Quercus lobata HOM05D005967 ORTHO05D005174 5.9e-06 55.1 55 49.1
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 5.9e-06 55.1 80 37.5
CDE03G0267 Ceratophyllum demersum HOM05D279964 ORTHO05D043887 1.0e-05 54.3 80 42.5
Gorai.001G117700 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.0e-05 54.3 54 50.0
MBI05_g30241_MAGBIO Magnolia biondii HOM05D005967 ORTHO05D005174 1.0e-05 54.3 69 40.6


User provided reference genes

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