Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 2.3e-193 678.7 334 100.0
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 4.8e-151 538.1 334 80.8
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 9.3e-147 523.9 337 79.5
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 2.2e-127 459.5 331 72.8
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 3.3e-120 435.6 341 68.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 5.7e-120 434.9 318 72.6
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 5.3e-118 428.3 345 64.6
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 2.5e-107 392.9 334 64.7
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 1.2e-106 390.6 333 62.5
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.6e-106 389.0 338 59.2
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 4.4e-104 382.1 334 59.9
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 5.7e-104 381.7 343 58.3
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 7.5e-104 381.3 344 59.6
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 9.7e-104 380.9 343 58.6
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 1.7e-103 380.2 344 58.1
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 3.7e-103 379.0 338 59.2
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 1.1e-102 377.5 335 58.5
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 9.1e-102 374.4 338 58.9
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.2e-101 374.0 344 58.7
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 1.6e-101 373.6 311 64.6
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 2.0e-101 373.2 341 59.8
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 4.5e-101 372.1 338 59.8
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 4.5e-101 372.1 343 58.9
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 5.9e-101 371.7 340 58.2
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 1.7e-100 370.2 343 57.4
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 2.9e-100 369.4 347 55.9
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 5.0e-100 368.6 343 56.6
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 6.5e-100 368.2 335 57.6
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 6.5e-100 368.2 345 57.4
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 8.5e-100 367.9 342 58.8
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 1.5e-99 367.1 342 57.9
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 2.5e-99 366.3 345 57.1
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 3.2e-99 365.9 342 57.3
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 7.2e-99 364.8 346 57.5
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 7.2e-99 364.8 354 55.6
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 9.4e-99 364.4 347 56.5
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 2.7e-98 362.8 343 56.3
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 3.6e-98 362.5 342 58.2
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 5.2e-97 358.6 352 54.5
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.2e-96 357.5 341 56.3
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 9.8e-96 354.4 339 56.3
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 8.3e-95 351.3 340 56.2
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.8e-94 350.1 340 55.6
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 7.0e-94 348.2 342 53.2
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 5.9e-93 345.1 281 66.9
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 1.0e-92 344.4 341 55.1
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 1.7e-92 343.6 331 55.0
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 1.7e-92 343.6 343 54.8
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 1.5e-91 340.5 345 54.8
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 4.2e-91 339.0 335 54.6
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 4.2e-91 339.0 343 54.2
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 9.4e-91 337.8 334 54.5
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 1.2e-90 337.4 339 54.0
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 2.1e-90 336.7 352 55.1
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 2.7e-90 336.3 341 53.7
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 6.1e-90 335.1 339 53.1
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 8.0e-90 334.7 331 53.8
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 1.8e-89 333.6 381 49.1
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 8.8e-89 331.3 339 54.0
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 1.2e-88 330.9 341 55.1
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 1.2e-88 330.9 342 54.4
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 1.5e-88 330.5 339 53.4
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 1.5e-88 330.5 339 52.8
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 2.0e-88 330.1 332 53.9
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 2.0e-88 330.1 304 57.9
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 2.6e-88 329.7 336 55.1
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 4.9e-87 325.5 333 54.1
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 6.3e-87 325.1 337 53.7
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 4.1e-86 322.4 347 52.2
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 1.2e-85 320.9 334 53.0
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 3.5e-85 319.3 336 51.8
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 2.3e-84 316.6 326 52.8
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 2.3e-84 316.6 277 59.2
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 8.6e-84 314.7 344 51.5
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 1.9e-83 313.5 348 49.4
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 1.2e-82 310.8 343 51.9
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 2.1e-82 310.1 430 43.7
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 2.1e-82 310.1 346 52.3
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 4.7e-82 308.9 277 58.8
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.2e-80 304.3 347 48.4
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 2.6e-80 303.1 345 49.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 4.9e-79 298.9 333 51.4
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 1.1e-78 297.7 276 56.5
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 3.2e-78 296.2 279 54.8
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.5e-75 287.3 326 49.1
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.0e-73 281.2 336 48.5
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 3.1e-73 279.6 337 49.0
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.2e-73 278.9 335 48.4
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 8.9e-73 278.1 312 48.1
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 4.4e-72 275.8 212 65.6
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 3.9e-68 262.7 212 61.8
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 2.4e-62 243.4 231 56.7
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 4.3e-51 206.1 289 38.4
arahy.Tifrunner.gnm1.ann1.D1UQZZ Arachis hypogaea HOM05D006958 ORTHO05D008814 8.4e-47 191.8 267 45.7
Psat7g107960 Pisum sativum HOM05D006958 ORTHO05D008814 1.1e-43 181.4 125 72.8
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 2.1e-42 177.2 185 54.6
AUR62022479 Chenopodium quinoa HOM05D006958 ORTHO05D008814 6.0e-37 159.1 174 48.3
Oeu049903.1 Olea europaea HOM05D006958 ORTHO05D008814 3.6e-34 149.8 165 46.7
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 9.9e-32 141.7 252 36.1
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 2.9e-31 140.2 196 39.8
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 4.2e-30 136.3 200 43.5
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 4.6e-29 132.9 128 58.6
Os07g0586000 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 5.1e-28 129.4 168 44.0
AUR62022480 Chenopodium quinoa HOM05D006958 ORTHO05D008814 1.1e-27 128.3 127 55.1
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 7.6e-24 115.5 114 56.1
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 2.5e-22 110.5 93 59.1
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 4.2e-22 109.8 124 53.2
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 9.3e-22 108.6 203 39.4
SEGI_02529 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.9e-19 100.9 160 36.2
SEGI_26692 Sequoiadendron giganteum HOM05D006958 ORTHO05D008814 1.9e-14 84.3 86 46.5
Glyma.07G264001 Glycine max HOM05D006958 ORTHO05D008814 3.9e-12 76.6 77 57.1
Psat0s3396g0160 Pisum sativum HOM05D006958 ORTHO05D008814 6.9e-09 65.9 37 78.4
Nn5g30604 Nelumbo nucifera HOM05D006958 ORTHO05D008814 8.5e-07 58.9 74 51.4
EL10Ac1g02376 Beta vulgaris HOM05D006958 ORTHO05D008814 1.9e-06 57.8 64 48.4


User provided reference genes

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