Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 5.9e-144 514.2 269 100.0
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 9.6e-86 320.9 377 54.6
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 5.3e-84 315.1 321 61.7
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 4.9e-82 308.5 222 76.1
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 1.2e-80 303.9 294 63.9
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 2.7e-80 302.8 293 61.8
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 6.7e-79 298.1 291 61.5
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 3.0e-71 272.7 335 54.6
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 3.9e-71 272.3 293 57.7
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 1.1e-70 270.8 158 86.1
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 1.9e-70 270.0 189 75.1
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 3.8e-66 255.8 291 55.0
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 6.5e-66 255.0 167 80.2
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 2.2e-61 240.0 290 53.1
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 5.9e-59 231.9 284 52.1
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 4.2e-57 225.7 174 69.0
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 5.5e-57 225.3 284 50.7
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 2.1e-56 223.4 206 60.7
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 6.1e-56 221.9 214 57.0
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 7.9e-56 221.5 165 71.5
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.8e-55 220.3 158 70.3
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 2.3e-55 219.9 270 52.2
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 6.7e-55 218.4 134 82.8
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 9.7e-54 214.5 153 71.9
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 1.3e-53 214.2 234 53.4
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 1.7e-53 213.8 186 60.8
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 2.2e-53 213.4 158 69.6
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 2.2e-53 213.4 225 56.0
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 2.8e-53 213.0 183 62.3
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 2.8e-53 213.0 285 50.5
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 4.8e-53 212.2 246 53.7
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 6.3e-53 211.8 284 48.2
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 6.3e-53 211.8 180 63.9
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.1e-52 211.1 152 71.7
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.8e-52 210.3 266 51.5
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 2.4e-52 209.9 190 62.6
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 4.1e-52 209.1 186 60.8
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 4.1e-52 209.1 152 70.4
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 5.3e-52 208.8 181 63.0
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 7.0e-52 208.4 278 47.5
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 9.1e-52 208.0 276 52.2
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 9.1e-52 208.0 276 52.2
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 2.6e-51 206.5 179 62.6
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 3.5e-51 206.1 187 58.8
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 3.5e-51 206.1 157 66.2
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 4.5e-51 205.7 158 67.1
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 5.9e-51 205.3 186 59.7
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 7.7e-51 204.9 272 49.3
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.3e-50 204.1 286 46.9
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 1.7e-50 203.8 248 52.0
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 2.2e-50 203.4 267 48.7
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 2.2e-50 203.4 267 47.9
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 2.2e-50 203.4 237 52.7
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 2.2e-50 203.4 286 47.2
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 2.2e-50 203.4 271 47.6
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 5.0e-50 202.2 261 47.9
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 6.5e-50 201.8 144 70.8
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 8.5e-50 201.4 181 61.3
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 1.5e-49 200.7 197 55.8
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.5e-49 200.7 294 45.6
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 1.9e-49 200.3 299 45.8
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 3.2e-49 199.5 240 50.4
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 3.2e-49 199.5 304 45.7
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 4.2e-49 199.1 260 49.6
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 5.5e-49 198.7 161 64.0
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 5.5e-49 198.7 161 64.0
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 5.5e-49 198.7 240 50.8
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 5.5e-49 198.7 240 50.4
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 7.2e-49 198.4 173 61.3
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 7.2e-49 198.4 145 69.7
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 9.4e-49 198.0 146 67.1
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 9.4e-49 198.0 146 67.1
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 9.4e-49 198.0 146 67.1
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 9.4e-49 198.0 146 67.1
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 1.6e-48 197.2 293 45.4
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 3.6e-48 196.1 146 66.4
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 8.0e-48 194.9 266 45.1
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 2.3e-47 193.4 293 44.0
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 3.0e-47 193.0 150 63.3
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 4.0e-47 192.6 302 46.0
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 8.8e-47 191.4 132 70.5
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 8.8e-47 191.4 199 53.3
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 8.8e-47 191.4 142 67.6
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 2.6e-46 189.9 154 63.0
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 2.6e-46 189.9 276 45.3
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 2.6e-46 189.9 197 54.3
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 5.7e-46 188.7 246 47.6
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 9.7e-46 188.0 164 61.6
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 1.3e-45 187.6 300 44.0
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 2.8e-45 186.4 262 46.2
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 6.3e-45 185.3 273 43.6
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 8.2e-45 184.9 156 59.6
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.1e-44 184.5 134 69.4
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 9.1e-44 181.4 200 50.5
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.2e-43 181.0 287 42.5
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 1.6e-43 180.6 182 56.6
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 1.6e-43 180.6 182 56.6
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 2.0e-43 180.3 239 46.9
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 2.7e-43 179.9 152 62.5
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 2.7e-43 179.9 269 46.8
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 5.9e-43 178.7 298 44.0
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 7.7e-43 178.3 247 47.0
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 1.0e-42 177.9 277 43.7
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 1.7e-42 177.2 160 60.0
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 8.5e-42 174.9 198 52.0
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-41 174.5 154 61.0
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.1e-41 174.5 154 61.0
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.9e-41 173.7 279 43.7
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 4.7e-40 169.1 328 40.5
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 4.7e-40 169.1 184 57.6
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 1.4e-39 167.5 131 64.1
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 1.8e-39 167.2 132 63.6
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 2.3e-39 166.8 271 43.9
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 5.2e-39 165.6 284 41.5
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 5.2e-39 165.6 224 47.8
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 2.6e-38 163.3 223 42.6
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 3.4e-38 162.9 136 62.5
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 3.4e-38 162.9 166 53.6
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 1.3e-37 161.0 136 64.7
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.7e-37 159.5 244 43.0
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 2.4e-36 156.8 194 50.0
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 3.1e-36 156.4 163 54.0
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 4.1e-36 156.0 270 39.3
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 1.3e-34 151.0 307 38.4
CSS0028445 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 8.6e-34 148.3 152 56.6
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 1.2e-30 137.9 264 37.1
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.4e-30 136.3 100 70.0
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 7.5e-30 135.2 137 53.3
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 2.8e-29 133.3 146 52.7
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 3.7e-29 132.9 132 50.0
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 2.3e-26 123.6 226 40.3
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.0e-26 122.5 153 45.8
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 1.1e-25 121.3 129 51.2
AUR62013504 Chenopodium quinoa HOM05D000258 ORTHO05D006237 4.4e-22 109.4 89 62.9
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 1.2e-19 101.3 138 43.5
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 7.8e-19 98.6 100 59.0
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 1.7e-18 97.4 133 38.3
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.0e-18 95.9 106 47.2
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 2.4e-12 77.0 141 33.3
arahy.Tifrunner.gnm1.ann1.YDKP0V Arachis hypogaea HOM05D005159 ORTHO05D006237 2.0e-11 73.9 206 35.0
QL06p007211 Quercus lobata HOM05D005159 ORTHO05D006237 5.0e-10 69.3 57 61.4
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 4.3e-09 66.2 170 27.6
Oeu062205.1 Olea europaea HOM05D005159 ORTHO05D006237 6.2e-08 62.4 76 46.1


User provided reference genes

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