Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37709 Trifolium pratense HOM05D003216 ORTHO05D000562 2.1e-95 352.4 186 100.0
TPR.G8671 Trifolium pratense HOM05D000593 ORTHO05D000562 5.1e-54 214.9 113 88.5
TPR.G28618 Trifolium pratense HOM05D000593 ORTHO05D000562 7.4e-53 211.1 110 88.2
TPR.G3927 Trifolium pratense HOM05D003216 ORTHO05D002268 2.2e-49 199.5 105 84.8
TPR.G21191 Trifolium pratense HOM05D003216 ORTHO05D002268 3.6e-39 165.6 135 59.3
TPR.G29741 Trifolium pratense HOM05D000593 ORTHO05D002268 2.2e-36 156.4 197 44.2
TPR.G54 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-36 156.0 84 85.7
TPR.G20851 Trifolium pratense HOM05D000593 ORTHO05D000562 7.0e-27 124.8 71 80.3
TPR.G28459 Trifolium pratense HOM05D003216 ORTHO05D002268 1.1e-24 117.5 164 39.6
TPR.G22274 Trifolium pratense HOM05D003216 ORTHO05D004526 5.5e-24 115.2 128 50.0
TPR.G8656 Trifolium pratense HOM05D003216 ORTHO05D002268 2.8e-20 102.8 92 63.0
Medtr1g015680 Medicago truncatula HOM05D003216 ORTHO05D002268 3.1e-14 82.8 83 54.2
Medtr1g054775 Medicago truncatula HOM05D000003 ORTHO05D000004 4.0e-14 82.4 90 42.2
Medtr5g018790 Medicago truncatula HOM05D003216 ORTHO05D002268 1.5e-13 80.5 108 45.4
TPR.G19405 Trifolium pratense HOM05D003216 ORTHO05D002268 2.0e-13 80.1 121 38.0
Medtr3g072200 Medicago truncatula HOM05D003216 ORTHO05D002268 7.5e-13 78.2 91 41.8
Medtr3g032550 Medicago truncatula HOM05D003216 ORTHO05D002268 1.3e-12 77.4 92 42.4
Medtr1g103800 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-12 75.1 108 41.7
Medtr7g068370 Medicago truncatula HOM05D003216 ORTHO05D002268 6.4e-12 75.1 90 41.1
Medtr3g104430 Medicago truncatula HOM05D003216 ORTHO05D000562 8.3e-12 74.7 84 39.3
Medtr7g029645 Medicago truncatula HOM05D003216 ORTHO05D002268 1.1e-11 74.3 83 48.2
Medtr3g467680 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-11 73.6 114 33.3
Medtr4g113170 Medicago truncatula HOM05D003216 ORTHO05D002268 5.4e-11 72.0 124 31.5
Medtr2g096070 Medicago truncatula HOM05D003216 ORTHO05D002268 9.2e-11 71.2 83 48.2
Medtr7g069450 Medicago truncatula HOM05D003216 ORTHO05D002268 2.0e-10 70.1 116 35.3
Medtr2g030885 Medicago truncatula HOM05D003216 ORTHO05D002268 6.0e-10 68.6 105 40.0
Hma1.2p1_0353F.1_g133160 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 1.3e-09 67.4 101 35.6
Medtr1g099140 Medicago truncatula HOM05D000593 ORTHO05D000562 3.0e-09 66.2 75 40.0
Medtr4g048540 Medicago truncatula HOM05D003216 ORTHO05D002268 3.9e-09 65.9 114 39.5
Ca_15677_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 5.0e-09 65.5 119 35.3
Medtr8g020433 Medicago truncatula HOM05D000593 ORTHO05D004526 1.5e-08 63.9 83 44.6
Medtr6g035400 Medicago truncatula HOM05D003216 ORTHO05D002268 1.9e-08 63.5 97 33.0
CSS0015084 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.5e-08 63.2 85 35.3
Medtr8g028025 Medicago truncatula HOM05D003216 ORTHO05D002268 2.5e-08 63.2 86 36.0
Phvul.008G000100 Phaseolus vulgaris HOM05D000593 ORTHO05D000562 2.5e-08 63.2 89 38.2
Ca_25222_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 4.3e-08 62.4 97 37.1
Ca_06057_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.2e-07 60.8 119 32.8
Medtr1g072330 Medicago truncatula HOM05D003216 ORTHO05D002268 1.2e-07 60.8 93 38.7
Atru.chr2.576 Acer truncatum HOM05D000593 ORTHO05D000562 1.6e-07 60.5 112 32.1
Ca_05380_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.8e-07 59.7 93 34.4
Ca_18398_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 2.8e-07 59.7 85 36.5
Hma1.2p1_0179F.1_g079060 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.8e-07 59.7 169 28.4
Hma1.2p1_0319F.1_g123940 Hydrangea macrophylla HOM05D000593 ORTHO05D000562 2.8e-07 59.7 101 32.7
Medtr2g061890 Medicago truncatula HOM05D003216 ORTHO05D002268 2.8e-07 59.7 80 35.0
CSS0038546 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.6e-07 59.3 106 32.1
Medtr1g094105 Medicago truncatula HOM05D000593 ORTHO05D000562 3.6e-07 59.3 69 42.0
TPR.G18522 Trifolium pratense HOM05D000593 ORTHO05D002268 3.6e-07 59.3 79 38.0
Medtr5g062340 Medicago truncatula HOM05D003216 ORTHO05D002268 4.7e-07 58.9 72 41.7
Atru.chr4.890 Acer truncatum HOM05D000593 ORTHO05D000562 6.2e-07 58.5 112 31.2
CSS0044639 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.1e-06 57.8 64 40.6
Ca_23377_v3 Cicer arietinum L. HOM05D000593 ORTHO05D002268 1.4e-06 57.4 95 36.8
TPR.G14990 Trifolium pratense HOM05D003216 ORTHO05D002268 1.4e-06 57.4 79 36.7
CSS0009535 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 1.8e-06 57.0 71 36.6
Ca_13605_v3 Cicer arietinum L. HOM05D000593 ORTHO05D000562 1.8e-06 57.0 93 33.3
Medtr7g006230 Medicago truncatula HOM05D003216 ORTHO05D002268 1.8e-06 57.0 69 40.6
Oeu035640.1 Olea europaea HOM05D000593 ORTHO05D000562 1.8e-06 57.0 71 39.4
CSS0017978 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 2.3e-06 56.6 71 36.6
Phvul.002G126900 Phaseolus vulgaris HOM05D000595 ORTHO05D004141 2.3e-06 56.6 69 43.5
CSS0040938 Camellia sinensis var. sinensis HOM05D000593 ORTHO05D000562 3.1e-06 56.2 71 35.2


User provided reference genes

Program Settings