Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 2.8e-126 455.3 228 100.0
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 9.6e-111 403.7 229 87.8
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 1.0e-104 383.6 228 85.1
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 1.3e-104 383.3 228 84.6
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 5.1e-104 381.3 239 82.4
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.9e-103 379.4 228 83.8
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 1.3e-99 366.7 230 81.7
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 4.2e-98 361.7 228 79.4
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 1.1e-95 353.6 227 78.4
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 9.6e-95 350.5 227 78.0
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 2.0e-92 342.8 224 75.0
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 1.3e-91 340.1 226 75.7
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 1.7e-91 339.7 225 75.1
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.2e-91 339.3 233 74.7
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 4.9e-91 338.2 233 74.2
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 8.4e-91 337.4 232 74.6
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 1.4e-90 336.7 233 73.8
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 1.9e-90 336.3 224 74.6
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 1.9e-90 336.3 224 75.4
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 2.5e-90 335.9 233 74.2
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 3.2e-90 335.5 226 74.8
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 4.2e-90 335.1 223 74.9
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 5.5e-90 334.7 226 75.2
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.3e-90 334.0 241 70.5
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 4.6e-89 331.6 232 71.1
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 6.0e-89 331.3 232 73.3
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 7.9e-89 330.9 230 73.9
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 1.0e-88 330.5 233 72.1
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 1.0e-88 330.5 230 73.5
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.3e-88 330.1 232 71.6
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 1.8e-88 329.7 226 73.9
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 6.7e-88 327.8 231 72.3
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 8.7e-88 327.4 234 71.4
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 8.7e-88 327.4 230 72.6
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.5e-87 326.6 228 71.1
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 2.5e-87 325.9 229 71.2
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 9.6e-87 323.9 237 70.5
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 9.6e-87 323.9 226 73.0
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 1.3e-86 323.6 225 70.7
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 1.3e-86 323.6 199 77.4
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 2.8e-86 322.4 229 71.2
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.2e-86 320.9 224 73.2
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 1.1e-85 320.5 227 72.7
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.1e-85 320.5 226 70.4
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 1.1e-85 320.5 231 73.2
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.8e-85 319.7 232 71.1
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 3.1e-85 318.9 225 69.3
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 4.0e-85 318.5 226 69.5
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 4.0e-85 318.5 240 68.3
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.0e-85 318.5 223 71.7
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.0e-85 318.5 229 70.3
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 5.3e-85 318.2 220 71.4
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 5.3e-85 318.2 220 71.4
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 6.9e-85 317.8 232 69.0
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 1.2e-84 317.0 231 71.0
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 1.2e-84 317.0 227 70.9
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.2e-84 317.0 232 68.5
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 2.0e-84 316.2 224 68.8
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 2.0e-84 316.2 278 62.2
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 5.8e-84 314.7 228 68.9
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 1.0e-83 313.9 233 68.7
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 1.3e-83 313.5 230 69.6
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 2.2e-83 312.8 225 70.7
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 2.9e-83 312.4 230 70.0
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 4.9e-83 311.6 233 68.7
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 6.5e-83 311.2 234 70.5
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 8.4e-83 310.8 227 69.6
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 2.5e-82 309.3 225 69.3
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 2.5e-82 309.3 218 72.5
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 2.1e-81 306.2 228 68.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 2.1e-81 306.2 222 68.0
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 4.6e-81 305.1 175 82.3
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 6.1e-81 304.7 237 67.9
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.3e-80 303.5 235 66.8
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 3.0e-80 302.4 220 69.5
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 6.7e-80 301.2 220 70.5
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.5e-79 300.1 251 63.7
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 1.9e-79 299.7 266 59.8
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 7.4e-79 297.7 182 78.6
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 1.3e-78 297.0 233 66.5
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.7e-78 295.4 298 57.0
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 6.9e-77 291.2 289 56.7
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.3e-75 287.0 186 73.7
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 2.5e-74 282.7 232 62.1
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 3.2e-74 282.3 242 62.4
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 1.6e-73 280.0 201 72.1
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 2.2e-70 269.6 230 62.2
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 8.2e-70 267.7 225 60.0
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 3.1e-69 265.8 185 75.7
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 4.1e-69 265.4 231 59.3
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 1.3e-67 260.4 161 77.0
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 1.1e-66 257.3 246 58.9
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 6.1e-65 251.5 223 60.5
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 1.4e-64 250.4 231 57.6
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 3.9e-64 248.8 178 66.3
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 1.5e-63 246.9 380 41.6
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 2.0e-63 246.5 199 60.3
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 7.4e-63 244.6 182 63.7
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 3.1e-61 239.2 227 56.8
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.5e-60 236.9 185 65.9
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 5.9e-60 235.0 151 81.5
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 2.5e-58 229.6 162 76.5
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 8.0e-57 224.6 184 58.2
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.4e-45 187.2 151 67.5
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 5.4e-45 185.3 182 50.0
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 3.1e-37 159.5 138 61.6
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 3.1e-37 159.5 138 61.6
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 8.6e-35 151.4 164 53.0
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 1.8e-32 143.7 163 44.8
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 1.8e-32 143.7 217 37.3
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 2.3e-32 143.3 137 59.9
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 3.9e-27 125.9 142 50.0
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 3.3e-26 122.9 142 49.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 2.4e-21 106.7 139 43.9
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 4.6e-20 102.4 102 57.8
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 8.6e-19 98.2 82 58.5
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-18 97.8 54 81.5
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 2.5e-18 96.7 108 57.4
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 5.2e-16 89.0 96 53.1
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 1.6e-12 77.4 100 52.0
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.3e-11 74.3 82 50.0
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 2.1e-09 67.0 48 64.6


User provided reference genes

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