Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37619 Trifolium pratense HOM05D004703 ORTHO05D005801 1.2e-169 599.7 306 100.0
Medtr4g101830 Medicago truncatula HOM05D004703 ORTHO05D005801 4.5e-148 528.1 309 89.6
Ca_12294_v3 Cicer arietinum L. HOM05D004703 ORTHO05D005801 8.8e-144 513.8 307 86.0
Glyma.05G054900 Glycine max HOM05D004703 ORTHO05D005801 1.2e-135 486.9 302 81.1
Lj4g0003091 Lotus japonicus HOM05D004703 ORTHO05D005801 1.3e-134 483.4 306 82.4
Glyma.05G054800 Glycine max HOM05D004703 ORTHO05D005801 1.7e-134 483.0 302 79.8
Lalb_Chr05g0225211 Lupinus albus HOM05D004703 ORTHO05D005801 5.9e-132 474.6 302 79.1
VMungo0251G1252 Vigna mungo HOM05D004703 ORTHO05D005801 1.7e-131 473.0 303 78.9
Phvul.003G216900 Phaseolus vulgaris HOM05D004703 ORTHO05D005801 1.2e-129 466.8 301 79.1
Psat4g069480 Pisum sativum HOM05D004703 ORTHO05D005801 5.2e-120 434.9 235 92.8
TAR629G2760 Trochodendron aralioides HOM05D004703 ORTHO05D005801 6.4e-118 427.9 275 77.1
CANSAT21G0478 Cannabis sativa HOM05D004703 ORTHO05D005801 3.2e-117 425.6 286 73.1
VMungo0251G1928 Vigna mungo HOM05D004703 ORTHO05D005801 9.2e-117 424.1 318 69.8
DCAR_006785 Daucus carota HOM05D004703 ORTHO05D005801 7.8e-116 421.0 267 76.8
Actinidia14493 Actinidia chinensis HOM05D004703 ORTHO05D005801 3.0e-115 419.1 281 74.4
QL12p016126 Quercus lobata HOM05D004703 ORTHO05D005801 3.3e-114 415.6 305 70.8
QL12p016291 Quercus lobata HOM05D004703 ORTHO05D005801 3.3e-114 415.6 305 70.8
Ciclev10021310m.g Citrus clementina HOM05D004703 ORTHO05D005801 1.2e-113 413.7 287 73.5
FvH4_5g01080 Fragaria vesca HOM05D004703 ORTHO05D005801 6.2e-113 411.4 275 74.5
Prupe.5G084800 Prunus persica HOM05D004703 ORTHO05D005801 6.2e-113 411.4 273 74.7
Sed0028019 Sechium edule HOM05D004703 ORTHO05D005801 8.0e-113 411.0 272 75.0
CSS0042147 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.4e-112 410.2 288 72.9
Atru.chr9.1491 Acer truncatum HOM05D004703 ORTHO05D005801 2.3e-112 409.5 270 75.9
Hma1.2p1_0138F.1_g062820 Hydrangea macrophylla HOM05D004703 ORTHO05D005801 2.3e-112 409.5 259 78.4
AT4G11980 Arabidopsis thaliana HOM05D004703 ORTHO05D005801 3.1e-112 409.1 269 74.7
Thecc.03G266100 Theobroma cacao HOM05D004703 ORTHO05D005801 3.1e-112 409.1 277 74.7
Cc08_g13610 Coffea canephora HOM05D004703 ORTHO05D005801 5.2e-112 408.3 288 70.1
COL.COLO4_23815 Corchorus olitorius HOM05D004703 ORTHO05D005801 5.2e-112 408.3 274 74.8
Dinv37721 Davidia involucrata HOM05D004703 ORTHO05D005801 5.2e-112 408.3 267 76.0
Oeu001909.1 Olea europaea HOM05D004703 ORTHO05D005801 8.9e-112 407.5 266 74.1
Haze_09002 Corylus avellana HOM05D004703 ORTHO05D005801 1.2e-111 407.1 269 75.8
CARHR254310 Cardamine hirsuta HOM05D004703 ORTHO05D005801 1.5e-111 406.8 268 73.9
Manes.01G070700 Manihot esculenta HOM05D004703 ORTHO05D005801 1.5e-111 406.8 279 74.2
Potri.003G118300 Populus trichocarpa HOM05D004703 ORTHO05D005801 1.5e-111 406.8 284 72.9
PGR042G1634 Punica granatum HOM05D004703 ORTHO05D005801 3.4e-111 405.6 300 69.0
AL6G46750 Arabidopsis lyrata HOM05D004703 ORTHO05D005801 7.5e-111 404.4 269 74.7
Thhalv10028825m.g Eutrema salsugineum HOM05D004703 ORTHO05D005801 1.3e-110 403.7 269 74.7
GSVIVG01019903001 Vitis vinifera HOM05D004703 ORTHO05D005801 1.7e-110 403.3 266 74.4
Migut.A00879 Erythranthe guttata HOM05D004703 ORTHO05D005801 2.2e-110 402.9 280 69.6
Gohir.D09G188100 Gossypium hirsutum HOM05D004703 ORTHO05D005801 2.2e-110 402.9 271 74.2
CiPaw.11G143800 Carya illinoinensis HOM05D004703 ORTHO05D005801 3.7e-110 402.1 266 75.6
Carub.0006s3108 Capsella rubella HOM05D004703 ORTHO05D005801 4.9e-110 401.7 269 74.3
Gohir.A09G193900 Gossypium hirsutum HOM05D004703 ORTHO05D005801 4.9e-110 401.7 271 73.4
Nitab4.5_0005167g0040 Nicotiana tabacum HOM05D004703 ORTHO05D005801 6.4e-110 401.4 296 70.3
TWI15G0205 Tripterygium wilfordii HOM05D004703 ORTHO05D005801 1.9e-109 399.8 302 68.5
Gorai.006G210900 Gossypium raimondii HOM05D004703 ORTHO05D005801 2.4e-109 399.4 271 73.4
AUR62010550 Chenopodium quinoa HOM05D004703 ORTHO05D005801 3.2e-109 399.1 266 74.1
MD04G1073000 Malus domestica HOM05D004703 ORTHO05D005801 3.2e-109 399.1 271 73.4
CsaV3_5G003450 Cucumis sativus L. HOM05D004703 ORTHO05D005801 5.4e-109 398.3 273 72.5
Duzib084G1157 Durio zibethinus HOM05D004703 ORTHO05D005801 9.2e-109 397.5 271 73.8
Hund14696 Selenicereus undatus HOM05D004703 ORTHO05D005801 1.2e-108 397.1 264 73.9
FAN18G3460 Fragaria x ananassa HOM05D004703 ORTHO05D005801 1.6e-108 396.7 298 68.5
Nitab4.5_0012494g0020 Nicotiana tabacum HOM05D004703 ORTHO05D005801 1.6e-108 396.7 274 74.1
RcHm_v2.0_Chr7g0200241 Rosa chinensis HOM05D004703 ORTHO05D005801 1.6e-108 396.7 276 71.4
Eucgr.E00504 Eucalyptus grandis HOM05D004703 ORTHO05D005801 2.1e-108 396.4 271 72.7
Sabra03G0082300 Salix brachista HOM05D004703 ORTHO05D005801 3.5e-108 395.6 316 66.5
BcaC04g21182 Brassica carinata HOM05D004703 ORTHO05D005801 4.6e-108 395.2 279 72.0
C09p34490 Brassica napus HOM05D004703 ORTHO05D005801 4.6e-108 395.2 279 72.0
BolC9t56293H Brassica oleracea HOM05D004703 ORTHO05D005801 4.6e-108 395.2 280 71.8
PGSC0003DMG400003941 Solanum tuberosum HOM05D004703 ORTHO05D005801 4.6e-108 395.2 265 73.2
FAN13G0401 Fragaria x ananassa HOM05D004703 ORTHO05D005801 6.0e-108 394.8 298 68.1
THA.LOC104806355 Tarenaya hassleriana HOM05D004703 ORTHO05D005801 6.0e-108 394.8 274 73.4
AUR62017343 Chenopodium quinoa HOM05D004703 ORTHO05D005801 1.0e-107 394.0 307 67.8
Sopen08g028180 Solanum pennellii HOM05D004703 ORTHO05D005801 1.0e-107 394.0 297 69.0
Solyc08g079820.3 Solanum lycopersicum HOM05D004703 ORTHO05D005801 1.3e-107 393.7 297 68.7
BcaB01g01695 Brassica carinata HOM05D004703 ORTHO05D005801 3.9e-107 392.1 272 73.5
RcHm_v2.0_Chr6g0265101 Rosa chinensis HOM05D004703 ORTHO05D005801 3.9e-107 392.1 274 71.5
arahy.Tifrunner.gnm1.ann1.RRY62Q Arachis hypogaea HOM05D004703 ORTHO05D005801 6.6e-107 391.3 230 84.8
RcHm_v2.0_Chr6g0265181 Rosa chinensis HOM05D004703 ORTHO05D005801 6.6e-107 391.3 274 71.5
Rhsim08G0184400 Rhododendron simsii HOM05D004703 ORTHO05D005801 3.3e-106 389.0 318 65.7
Lsat_1_v5_gn_6_10661 Lactuca sativa HOM05D004703 ORTHO05D005801 4.3e-106 388.7 303 63.4
Aqoxy7G00537 Aquilegia oxysepala HOM05D004703 ORTHO05D005801 2.8e-105 386.0 292 67.5
SGA_v2.0_scaffold37G14871 Striga asiatica HOM05D004703 ORTHO05D005801 4.7e-105 385.2 298 65.1
EL10Ac5g12672 Beta vulgaris HOM05D004703 ORTHO05D005801 1.8e-104 383.3 276 69.6
ECA233G5834 Erigeron canadensis HOM05D004703 ORTHO05D005801 1.2e-103 380.6 269 68.4
unitig_22.g5479 Utricularia gibba HOM05D004703 ORTHO05D005801 1.2e-103 380.6 284 65.8
Ah.12g053460 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.7e-102 376.7 268 70.5
Ah.12g057950 Amaranthus hybridus HOM05D004703 ORTHO05D005801 1.7e-102 376.7 268 70.5
PSO478G3008 Papaver somniferum HOM05D004703 ORTHO05D005801 2.2e-102 376.3 278 69.1
Peaxi162Scf00620g00231 Petunia axillaris HOM05D004703 ORTHO05D005801 2.2e-102 376.3 295 66.1
Ah.02g116260 Amaranthus hybridus HOM05D004703 ORTHO05D005801 4.9e-102 375.2 267 70.4
PSO782G3959 Papaver somniferum HOM05D004703 ORTHO05D005801 4.9e-102 375.2 315 63.2
CSS0006775 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 1.1e-101 374.0 230 80.0
CDE04G3458 Ceratophyllum demersum HOM05D004703 ORTHO05D005801 1.9e-101 373.2 257 71.2
Lj2A203G54 Lonicera japonica HOM05D004703 ORTHO05D005801 7.1e-101 371.3 239 77.0
ClCG01G003390 Citrullus lanatus HOM05D004703 ORTHO05D005801 2.1e-100 369.8 318 61.9
Os06g0129700 Oryza sativa ssp. japonica HOM05D004703 ORTHO05D005801 3.9e-99 365.5 277 63.5
PSO478G3534 Papaver somniferum HOM05D004703 ORTHO05D005801 3.9e-99 365.5 266 69.2
MBI04_g28556_MAGBIO Magnolia biondii HOM05D004703 ORTHO05D005801 6.6e-99 364.8 283 66.8
CAN.G630.24 Capsicum annuum HOM05D004703 ORTHO05D005801 1.1e-98 364.0 231 77.5
HanXRQChr07g0186971 Helianthus annuus HOM05D004703 ORTHO05D005801 2.5e-98 362.8 353 55.8
MELO3C005608.2 Cucumis melo HOM05D004703 ORTHO05D005801 4.7e-97 358.6 377 53.3
Cpa.g.sc29.48 Carica papaya HOM05D004703 ORTHO05D005801 6.2e-97 358.2 284 64.8
HPP92_020651 Vanilla planifolia HOM05D004703 ORTHO05D005801 9.9e-95 350.9 291 61.9
Aa31LG9G10490 Aethionema arabicum HOM05D004703 ORTHO05D005801 1.5e-90 337.0 300 61.0
A09p27170 Brassica napus HOM05D004703 ORTHO05D005801 9.6e-90 334.3 261 65.1
arahy.Tifrunner.gnm1.ann1.TVWC12 Arachis hypogaea HOM05D004703 ORTHO05D005801 6.2e-89 331.6 237 73.4
FAN08G2483 Fragaria x ananassa HOM05D004703 ORTHO05D005801 9.9e-87 324.3 238 69.3
CBR_g30593 Chara braunii HOM05D004703 ORTHO05D005801 3.2e-85 319.3 251 61.0
Mapoly0093s0020 Marchantia polymorpha HOM05D004703 ORTHO05D005801 1.3e-83 313.9 254 60.6
SalBow6G2643 Salvia bowleyana HOM05D004703 ORTHO05D005801 1.3e-81 307.4 194 75.8
Pp3c15_11750 Physcomitrium patens HOM05D004703 ORTHO05D005801 1.4e-80 303.9 254 59.1
vmacro19246 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 3.2e-77 292.7 196 77.0
Sc07g0009460 Simmondsia chinensis HOM05D004703 ORTHO05D005801 6.2e-73 278.5 222 64.0
SMO140G0070 Selaginella moellendorffii HOM05D004703 ORTHO05D005801 6.9e-72 275.0 201 64.7
Nn1g00505 Nelumbo nucifera HOM05D004703 ORTHO05D005801 3.8e-70 269.2 224 63.4
RcHm_v2.0_Chr0c37g0502981 Rosa chinensis HOM05D004703 ORTHO05D005801 3.2e-69 266.2 205 68.3
Sp6g05530 Schrenkiella parvula HOM05D004703 ORTHO05D005801 7.1e-69 265.0 171 80.1
Zm00001eb378400 Zea mays HOM05D004703 ORTHO05D005801 3.3e-66 256.1 172 71.5
arahy.Tifrunner.gnm1.ann1.HPWZ3I Arachis hypogaea HOM05D004703 ORTHO05D005801 2.1e-65 253.4 156 80.8
RcHm_v2.0_Chr4g0403961 Rosa chinensis HOM05D004703 ORTHO05D005801 5.3e-64 248.8 169 73.4
Haze_13993 Corylus avellana HOM05D004703 ORTHO05D005801 1.7e-62 243.8 167 73.7
AagrBONN_evm.TU.Sc2ySwM_344.4389 Anthoceros agrestis HOM05D004703 ORTHO05D005801 1.7e-54 217.2 216 53.2
MSTRG.25560 Avicennia marina HOM05D004703 ORTHO05D005801 7.2e-53 211.8 130 80.0
BcaB04g18565 Brassica carinata HOM05D004703 ORTHO05D005801 7.2e-53 211.8 172 65.1
BcaB02g09202 Brassica carinata HOM05D004703 ORTHO05D005801 6.1e-52 208.8 172 64.5
arahy.Tifrunner.gnm1.ann1.U0A30G Arachis hypogaea HOM05D004703 ORTHO05D005801 2.4e-48 196.8 156 69.2
arahy.Tifrunner.gnm1.ann1.0W2QGA Arachis hypogaea HOM05D004703 ORTHO05D005801 6.9e-48 195.3 156 68.6
arahy.Tifrunner.gnm1.ann1.R8Q162 Arachis hypogaea HOM05D004703 ORTHO05D005801 9.1e-48 194.9 156 67.9
BcaB02g11533 Brassica carinata HOM05D004703 ORTHO05D005801 2.0e-47 193.7 229 49.8
arahy.Tifrunner.gnm1.ann1.DGE7ZD Arachis hypogaea HOM05D004703 ORTHO05D005801 3.4e-47 193.0 173 63.0
arahy.Tifrunner.gnm1.ann1.QD9SPH Arachis hypogaea HOM05D004703 ORTHO05D005801 4.5e-47 192.6 156 67.9
arahy.Tifrunner.gnm1.ann1.7IH5G2 Arachis hypogaea HOM05D004703 ORTHO05D005801 7.7e-47 191.8 169 65.1
arahy.Tifrunner.gnm1.ann1.TN8QBF Arachis hypogaea HOM05D004703 ORTHO05D005801 2.2e-46 190.3 156 68.6
arahy.Tifrunner.gnm1.ann1.KBZV3C Arachis hypogaea HOM05D004703 ORTHO05D005801 6.5e-46 188.7 156 66.7
arahy.Tifrunner.gnm1.ann1.J3Q2MP Arachis hypogaea HOM05D004703 ORTHO05D005801 4.2e-45 186.0 159 65.4
ATR0905G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 8.8e-43 178.3 122 69.7
arahy.Tifrunner.gnm1.ann1.QT2LTC Arachis hypogaea HOM05D004703 ORTHO05D005801 3.1e-40 169.9 143 66.4
arahy.Tifrunner.gnm1.ann1.EX0EXI Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-39 167.2 156 62.8
BcaC01g04204 Brassica carinata HOM05D004703 ORTHO05D005801 3.8e-38 162.9 108 75.9
RcHm_v2.0_Chr4g0425481 Rosa chinensis HOM05D004703 ORTHO05D005801 5.5e-37 159.1 177 55.4
arahy.Tifrunner.gnm1.ann1.UX21TB Arachis hypogaea HOM05D004703 ORTHO05D005801 2.7e-36 156.8 160 57.5
arahy.Tifrunner.gnm1.ann1.YD44XK Arachis hypogaea HOM05D004703 ORTHO05D005801 2.7e-36 156.8 160 57.5
arahy.Tifrunner.gnm1.ann1.QV6CQV Arachis hypogaea HOM05D004703 ORTHO05D005801 4.7e-36 156.0 125 67.2
Zm00001eb279110 Zea mays HOM05D004703 ORTHO05D005801 1.1e-34 151.4 98 75.5
arahy.Tifrunner.gnm1.ann1.WGQ9HG Arachis hypogaea HOM05D004703 ORTHO05D005801 2.0e-34 150.6 123 67.5
arahy.Tifrunner.gnm1.ann1.XKXY1P Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-34 150.2 94 83.0
arahy.Tifrunner.gnm1.ann1.L680XF Arachis hypogaea HOM05D004703 ORTHO05D005801 1.7e-33 147.5 95 80.0
Zm00001eb113910 Zea mays HOM05D004703 ORTHO05D005801 3.7e-33 146.4 100 72.0
Cfa024731 Carpinus fangiana HOM05D004703 ORTHO05D005801 2.9e-30 136.7 303 33.3
ATR0251G001 Amborella trichopoda HOM05D004703 ORTHO05D005801 7.2e-29 132.1 88 71.6
arahy.Tifrunner.gnm1.ann1.0PA3BU Arachis hypogaea HOM05D004703 ORTHO05D005801 5.2e-27 125.9 108 64.8
arahy.Tifrunner.gnm1.ann1.DQS0N1 Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-26 123.6 161 50.3
vmacro19247 Vaccinium macrocarpon HOM05D004703 ORTHO05D005801 8.3e-25 118.6 74 75.7
arahy.Tifrunner.gnm1.ann1.5L4UK7 Arachis hypogaea HOM05D004703 ORTHO05D005801 1.6e-23 114.4 133 51.1
arahy.Tifrunner.gnm1.ann1.IA6KQS Arachis hypogaea HOM05D004703 ORTHO05D005801 1.1e-21 108.2 70 81.4
arahy.Tifrunner.gnm1.ann1.2KDH9Q Arachis hypogaea HOM05D004703 ORTHO05D005801 2.6e-18 97.1 95 57.9
arahy.Tifrunner.gnm1.ann1.N0B60F Arachis hypogaea HOM05D003718 ORTHO05D004402 5.7e-18 95.9 57 80.7
arahy.Tifrunner.gnm1.ann1.4J0L4L Arachis hypogaea HOM05D004703 ORTHO05D005801 2.8e-17 93.6 89 60.7
CSS0004055 Camellia sinensis var. sinensis HOM05D004703 ORTHO05D005801 9.1e-16 88.6 57 71.9
SalBow6G4210 Salvia bowleyana HOM05D004703 ORTHO05D005801 3.4e-10 70.1 116 39.7
arahy.Tifrunner.gnm1.ann1.RAR2PQ Arachis hypogaea HOM05D004703 ORTHO05D030873 1.3e-09 68.2 111 40.5
arahy.Tifrunner.gnm1.ann1.54H2MY Arachis hypogaea HOM05D001155 ORTHO05D015979 1.6e-07 61.2 43 69.8
arahy.Tifrunner.gnm1.ann1.5AIV52 Arachis hypogaea HOM05D001155 ORTHO05D001080 4.6e-07 59.7 35 80.0
arahy.Tifrunner.gnm1.ann1.CXRB51 Arachis hypogaea HOM05D004703 ORTHO05D015979 4.6e-07 59.7 35 80.0


User provided reference genes

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