Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 1.5e-139 499.6 264 100.0
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 6.1e-125 451.1 265 82.3
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 5.0e-119 431.4 264 78.8
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 1.0e-116 423.7 264 78.0
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 5.7e-115 417.9 264 75.4
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 9.7e-115 417.2 264 74.6
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 9.1e-113 410.6 264 73.9
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 9.1e-113 410.6 264 74.6
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 5.9e-112 407.9 262 76.0
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 3.8e-103 378.6 262 67.9
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 2.3e-100 369.4 259 70.3
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 5.7e-99 364.8 264 68.9
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 3.5e-96 355.5 264 64.8
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 1.0e-95 354.0 264 64.0
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 2.5e-94 349.4 264 62.9
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 7.2e-94 347.8 269 63.2
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 2.7e-93 345.9 264 62.9
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.0e-93 344.4 263 63.5
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 1.0e-92 344.0 263 63.5
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.0e-92 344.0 263 63.5
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 2.3e-92 342.8 265 63.0
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.0e-92 342.4 263 63.1
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 5.2e-92 341.7 264 62.5
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 6.8e-92 341.3 262 62.6
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.2e-91 340.5 264 61.0
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 2.0e-91 339.7 267 61.8
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 2.0e-91 339.7 263 61.6
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.6e-91 339.3 264 64.0
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 2.6e-91 339.3 264 64.0
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 3.4e-91 339.0 264 61.4
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 4.4e-91 338.6 263 62.0
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 9.8e-91 337.4 264 60.2
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 1.7e-90 336.7 266 63.2
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 3.7e-90 335.5 262 62.6
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 4.8e-90 335.1 306 54.9
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 7.0e-89 331.3 264 60.6
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.2e-88 330.5 263 60.1
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 5.9e-88 328.2 255 62.4
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 1.0e-87 327.4 266 58.6
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.3e-87 327.0 266 61.7
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 2.2e-87 326.2 255 61.2
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 2.2e-87 326.2 266 60.2
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 2.9e-87 325.9 266 59.0
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 5.0e-87 325.1 255 62.0
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 6.5e-87 324.7 255 61.6
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 9.4e-86 320.9 255 60.8
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.2e-85 320.5 255 61.6
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 2.1e-85 319.7 262 58.4
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 5.2e-84 315.1 263 59.7
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 6.8e-84 314.7 255 59.2
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 8.8e-84 314.3 266 57.9
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 2.6e-83 312.8 255 60.0
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 7.5e-83 311.2 266 57.9
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.7e-82 310.1 260 59.6
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.7e-82 310.1 253 60.1
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 3.7e-82 308.9 266 57.1
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.1e-81 307.4 251 60.6
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 7.0e-81 304.7 266 55.3
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 7.0e-81 304.7 269 58.0
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 9.2e-81 304.3 252 59.5
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 3.5e-80 302.4 251 60.6
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.0e-79 300.8 169 84.6
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 1.0e-79 300.8 169 84.6
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 5.0e-79 298.5 266 54.5
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 8.6e-79 297.7 268 56.7
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 1.5e-78 297.0 257 56.4
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 1.4e-76 290.4 219 64.4
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 9.8e-75 284.3 222 61.7
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 2.2e-74 283.1 264 56.1
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 2.3e-71 273.1 255 55.3
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 1.5e-67 260.4 251 53.4
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 6.4e-66 255.0 227 54.6
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 1.0e-63 247.7 177 66.7
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 9.8e-59 231.1 226 50.9
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 8.3e-58 228.0 222 49.5
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 1.4e-57 227.3 229 49.3
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 7.3e-54 214.9 202 56.9
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 8.1e-53 211.5 164 63.4
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.9e-46 190.3 134 68.7
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.2e-45 187.6 128 65.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 7.1e-41 171.8 167 52.1
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 1.6e-40 170.6 133 65.4
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 1.0e-39 167.9 164 50.0
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 6.6e-39 165.2 286 38.1
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 1.9e-38 163.7 163 49.7
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.3e-38 162.5 103 73.8
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 2.4e-33 146.7 144 48.6
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 4.3e-30 136.0 103 63.1
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 3.2e-25 119.8 100 56.0
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 1.0e-23 114.8 103 58.3
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 4.3e-22 109.4 318 27.0
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.3e-21 107.8 318 27.0
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.0e-15 88.2 53 69.8
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 5.1e-15 85.9 53 67.9
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 5.7e-14 82.4 75 52.0
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.6e-13 80.9 93 46.2
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 2.9e-10 70.1 112 41.1


User provided reference genes

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