Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37384 Trifolium pratense HOM05D000388 ORTHO05D000473 1.3e-34 149.1 70 100.0
FAN04G0046 Fragaria x ananassa HOM05D000388 ORTHO05D000473 1.4e-15 85.9 65 69.2
Sed0000383 Sechium edule HOM05D000388 ORTHO05D000473 1.4e-15 85.9 65 69.2
Sed0003706 Sechium edule HOM05D000388 ORTHO05D000473 1.4e-15 85.9 65 69.2
Sed0023791 Sechium edule HOM05D000388 ORTHO05D000473 1.4e-15 85.9 65 69.2
unitig_87.g27945 Utricularia gibba HOM05D000388 ORTHO05D000473 3.0e-15 84.7 47 87.2
Ah.10g027560 Amaranthus hybridus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
AL2G20770 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
AL2G21380 Arabidopsis lyrata HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
ATCG00350 Arabidopsis thaliana HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
arahy.Tifrunner.gnm1.ann1.3I3T69 Arachis hypogaea HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
arahy.Tifrunner.gnm1.ann1.6T1SKH Arachis hypogaea HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
arahy.Tifrunner.gnm1.ann1.7VZ02V Arachis hypogaea HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
arahy.Tifrunner.gnm1.ann1.GDHS0B Arachis hypogaea HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
EL10Ac1g02283 Beta vulgaris HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
EL10Ac4g08615 Beta vulgaris HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
BNapus_Darmor_BZH_scaffold_287p00040 Brassica napus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
C09p40160 Brassica napus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
BolSC45t60869H Brassica oleracea HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
BolSC46t61044H Brassica oleracea HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
BraSC25t45838Z Brassica rapa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G1183.8 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G1321.10 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G16.3 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G1738.1 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G500.83 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G584.13 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G679.5 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G931.1 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G939.21 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CAN.G980.19 Capsicum annuum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
CARHR282010 Cardamine hirsuta HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Cfa021578 Carpinus fangiana HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
AUR62036627 Chenopodium quinoa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 65 67.7
MELO3C000101.2 Cucumis melo HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
MELO3C028163.2 Cucumis melo HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
DCAR_032484 Daucus carota HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Migut.D01423 Erythranthe guttata HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Migut.J01361 Erythranthe guttata HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr00c0268g0572941 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr02g0044801 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr04g0099351 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr05g0130081 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr07g0201041 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr08g0210261 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQChr11g0326701 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hma1.2p1_0248F.1_g102140 Hydrangea macrophylla HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lsat_1_v5_gn_1_110681 Lactuca sativa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lsat_1_v5_gn_1_88121 Lactuca sativa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lsat_1_v5_gn_4_147740 Lactuca sativa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lsat_1_v5_gn_5_152620 Lactuca sativa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lsat_1_v5_gn_8_26541 Lactuca sativa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lj2C1239T9 Lonicera japonica HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
LjContig00318g0020224 Lotus japonicus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Lalb_Chr01g0015101 Lupinus albus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Medtr0002s0580 Medicago truncatula HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Medtr3g035600 Medicago truncatula HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Nn055s41932 Nelumbo nucifera HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Nn287s46143 Nelumbo nucifera HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Nn3g17667 Nelumbo nucifera HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
PSO548G0063 Papaver somniferum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Potri.007G061621 Populus trichocarpa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Potri.007G062582 Populus trichocarpa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Potri.013G141912 Populus trichocarpa HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
PGR111G0058 Punica granatum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
QL93p0270_0013 Quercus lobata HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
QL93p2019_0006 Quercus lobata HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
RhsimPtG0004100 Rhododendron simsii HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
RcHm_v2.0_CPg0502251 Rosa chinensis HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
SabraPtG0002300 Salix brachista HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund08564 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund17622 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund18039 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund24076 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund25932 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27449 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27565 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27605 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27659 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27667 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27702 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27747 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27802 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27843 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27870 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund27913 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28001 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28022 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28029 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28055 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28088 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28120 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28157 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28165 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28192 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28205 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28241 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28250 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28283 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28295 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28339 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28348 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28356 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28369 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28382 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28394 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28410 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28443 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28497 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28552 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28581 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28621 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28645 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28683 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28694 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28699 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund28718 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29056 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29135 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29410 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29625 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29674 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29777 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29905 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Hund29947 Selenicereus undatus HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Sc06g0004330 Simmondsia chinensis HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Solyc00g500057.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Solyc00g500139.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Solyc00g500209.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
SGA_v2.0_scaffold781G53595 Striga asiatica HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
unitig_91.g26502 Utricularia gibba HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
vmacro22405 Vaccinium macrocarpon HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 3.9e-15 84.3 45 88.9
Nn082s42683 Nelumbo nucifera HOM05D000388 ORTHO05D000473 6.7e-15 83.6 45 86.7
HanXRQChr09g0260841 Helianthus annuus HOM05D000388 ORTHO05D000473 1.1e-14 82.8 45 86.7
Nn6g33245 Nelumbo nucifera HOM05D000388 ORTHO05D000473 1.1e-14 82.8 45 86.7
COL.COLO4_00698 Corchorus olitorius HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
Lalb_Chr12g0207241 Lupinus albus HOM05D000388 ORTHO05D000473 2.0e-14 82.0 42 92.9
SEGI_03155 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
SEGI_10622 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
SEGI_28765 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
SEGI_29931 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
SEGI_31774 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
SEGI_34981 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 2.0e-14 82.0 45 86.7
C09p29530 Brassica napus HOM05D000388 ORTHO05D000473 4.4e-14 80.9 44 88.6
Gohir.A01G139613 Gossypium hirsutum HOM05D000388 ORTHO05D000473 4.4e-14 80.9 45 84.4
SEGI_07890 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 7.4e-14 80.1 45 84.4
Sc08g0003630 Simmondsia chinensis HOM05D000388 ORTHO05D000473 7.4e-14 80.1 44 84.1
HPP92_022116 Vanilla planifolia HOM05D000388 ORTHO05D000473 7.4e-14 80.1 45 84.4
CAN.G1478.13 Capsicum annuum HOM05D000388 ORTHO05D000473 9.7e-14 79.7 45 84.4
Lalb_Chr07g0192131 Lupinus albus HOM05D000388 ORTHO05D000473 1.3e-13 79.3 41 92.7
SEGI_15302 Sequoiadendron giganteum HOM05D000388 ORTHO05D000473 1.3e-13 79.3 45 84.4
CAN.G63.15 Capsicum annuum HOM05D000388 ORTHO05D000473 2.8e-13 78.2 44 79.5
Lsat_1_v5_gn_2_15621 Lactuca sativa HOM05D000388 ORTHO05D000473 8.2e-13 76.6 45 80.0
Lsat_1_v5_gn_8_105461 Lactuca sativa HOM05D000388 ORTHO05D000473 1.4e-12 75.9 45 80.0
HanXRQChr00c0492g0575031 Helianthus annuus HOM05D000388 ORTHO05D000473 3.5e-11 71.2 45 80.0
Solyc12g032960.1 Solanum lycopersicum HOM05D000388 ORTHO05D000473 7.7e-11 70.1 35 88.6
Sed0004796 Sechium edule HOM05D000388 ORTHO05D000473 3.8e-10 67.8 34 91.2
Gorai.005G166000 Gossypium raimondii HOM05D000388 ORTHO05D000473 8.5e-10 66.6 41 78.0
CAN.G386.17 Capsicum annuum HOM05D000388 ORTHO05D004888 4.2e-09 64.3 35 85.7
HanXRQChr00c0300g0573271 Helianthus annuus HOM05D000388 ORTHO05D000473 4.2e-09 64.3 35 85.7
Nitab4.5_0002446g0030 Nicotiana tabacum HOM05D000388 ORTHO05D000473 4.2e-09 64.3 64 54.7
CAN.G505.13 Capsicum annuum HOM05D000388 ORTHO05D000473 5.5e-09 63.9 33 84.8
arahy.Tifrunner.gnm1.ann1.ITK2CB Arachis hypogaea HOM05D000388 ORTHO05D000473 1.6e-08 62.4 31 90.3
Gohir.D02G148220 Gossypium hirsutum HOM05D000388 ORTHO05D000473 1.6e-08 62.4 41 73.2
Gorai.013G235100 Gossypium raimondii HOM05D000388 ORTHO05D000473 1.6e-08 62.4 53 62.3
SMO086G0014 Selaginella moellendorffii HOM05D000388 ORTHO05D000473 1.6e-08 62.4 45 71.1
Nitab4.5_0000747g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 2.1e-08 62.0 31 87.1
HanXRQChr02g0041711 Helianthus annuus HOM05D000388 ORTHO05D000473 3.6e-08 61.2 37 81.1
CAN.G500.65 Capsicum annuum HOM05D000388 ORTHO05D000473 6.1e-08 60.5 35 80.0
Gorai.013G141200 Gossypium raimondii HOM05D000388 ORTHO05D000473 4.0e-07 57.8 33 81.8
BraA06t25432Z Brassica rapa HOM05D000388 ORTHO05D000473 5.2e-07 57.4 35 77.1
Migut.D01350 Erythranthe guttata HOM05D000388 ORTHO05D000473 5.2e-07 57.4 29 89.7
Gohir.D10G250250 Gossypium hirsutum HOM05D000388 ORTHO05D000473 6.7e-07 57.0 31 83.9


User provided reference genes

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