Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37368 Trifolium pratense HOM05D007369 ORTHO05D009369 1.5e-234 815.8 414 100.0
Medtr8g093650 Medicago truncatula HOM05D007369 ORTHO05D009369 8.4e-182 640.6 450 75.6
Ca_17638_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 9.7e-154 547.4 473 64.9
Psat1g187040 Pisum sativum HOM05D007369 ORTHO05D009369 8.8e-147 524.2 479 62.6
VMungo0540G1702 Vigna mungo HOM05D007369 ORTHO05D009369 2.9e-142 509.2 427 65.8
Glyma.13G214800 Glycine max HOM05D007369 ORTHO05D009369 1.1e-141 507.3 422 67.1
Phvul.006G161000 Phaseolus vulgaris HOM05D007369 ORTHO05D009369 3.2e-141 505.8 420 65.7
Lalb_Chr18g0055751 Lupinus albus HOM05D007369 ORTHO05D009369 3.7e-137 492.3 422 63.5
Glyma.15G098300 Glycine max HOM05D007369 ORTHO05D009369 1.4e-131 473.8 417 64.3
arahy.Tifrunner.gnm1.ann1.ED76E0 Arachis hypogaea HOM05D007369 ORTHO05D009369 9.2e-128 461.1 401 64.1
arahy.Tifrunner.gnm1.ann1.IR05CW Arachis hypogaea HOM05D007369 ORTHO05D009369 4.7e-124 448.7 416 61.1
Ca_00577_v3 Cicer arietinum L. HOM05D007369 ORTHO05D009369 2.2e-121 439.9 326 73.3
LjContig00389g0017607 Lotus japonicus HOM05D007369 ORTHO05D009369 9.5e-117 424.5 354 65.3
QL06p007318 Quercus lobata HOM05D007369 ORTHO05D009369 9.0e-91 338.2 427 48.9
Thecc.04G277200 Theobroma cacao HOM05D007369 ORTHO05D009369 1.4e-88 330.9 425 48.9
Dinv38329 Davidia involucrata HOM05D007369 ORTHO05D009369 7.1e-88 328.6 427 46.4
Cfa015498 Carpinus fangiana HOM05D007369 ORTHO05D009369 2.3e-86 323.6 423 46.8
Ciclev10005057m.g Citrus clementina HOM05D007369 ORTHO05D009369 6.4e-81 305.4 422 47.2
Duzib052G0382 Durio zibethinus HOM05D007369 ORTHO05D009369 1.0e-78 298.1 413 45.0
Gohir.D09G060700 Gossypium hirsutum HOM05D007369 ORTHO05D009369 3.3e-77 293.1 407 45.9
Gorai.006G075300 Gossypium raimondii HOM05D007369 ORTHO05D009369 3.3e-77 293.1 425 45.4
CSS0015973 Camellia sinensis var. sinensis HOM05D007369 ORTHO05D009369 6.9e-75 285.4 422 44.8
Gohir.A09G061800 Gossypium hirsutum HOM05D007369 ORTHO05D009369 1.5e-74 284.3 407 45.7
CiPaw.02G086900 Carya illinoinensis HOM05D007369 ORTHO05D009369 2.6e-74 283.5 420 43.3
TAR636G2558 Trochodendron aralioides HOM05D007369 ORTHO05D009369 1.7e-73 280.8 438 42.5
Potri.008G195300 Populus trichocarpa HOM05D007369 ORTHO05D009369 4.9e-73 279.3 428 42.1
Prupe.1G142600 Prunus persica HOM05D007369 ORTHO05D009369 4.9e-73 279.3 431 42.5
MD13G1174200 Malus domestica HOM05D007369 ORTHO05D009369 9.3e-72 275.0 426 43.7
COL.COLO4_13933 Corchorus olitorius HOM05D007369 ORTHO05D009369 6.7e-70 268.9 492 38.0
Manes.15G017400 Manihot esculenta HOM05D007369 ORTHO05D009369 5.7e-69 265.8 413 43.1
Hma1.2p1_0078F.1_g040800 Hydrangea macrophylla HOM05D007369 ORTHO05D009369 7.4e-69 265.4 418 41.6
Duzib151G0340 Durio zibethinus HOM05D007369 ORTHO05D009369 1.4e-67 261.2 422 41.7
Haze_01056 Corylus avellana HOM05D007369 ORTHO05D009369 1.8e-67 260.8 466 39.5
GSVIVG01017812001 Vitis vinifera HOM05D007369 ORTHO05D009369 1.2e-66 258.1 416 43.0
RcHm_v2.0_Chr4g0420931 Rosa chinensis HOM05D007369 ORTHO05D009369 2.6e-66 256.9 424 41.7
Actinidia40222 Actinidia chinensis HOM05D007369 ORTHO05D009369 2.9e-65 253.4 409 42.1
Nn3g21294 Nelumbo nucifera HOM05D007369 ORTHO05D009369 3.8e-65 253.1 425 41.6
FAN12G1425 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.3e-64 248.4 426 41.1
FAN12G3176 Fragaria x ananassa HOM05D007369 ORTHO05D009369 9.3e-64 248.4 426 41.1
CANSAT78G0356 Cannabis sativa HOM05D007369 ORTHO05D009369 6.1e-63 245.7 429 39.6
FvH4_4g17160 Fragaria vesca HOM05D007369 ORTHO05D009369 6.1e-63 245.7 426 40.8
FAN17G0929 Fragaria x ananassa HOM05D007369 ORTHO05D009369 7.9e-63 245.4 426 41.1
Rhsim04G0215900 Rhododendron simsii HOM05D007369 ORTHO05D009369 3.0e-62 243.4 434 38.5
FAN07G2486 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.5e-61 241.1 424 40.3
Oeu044796.2 Olea europaea HOM05D007369 ORTHO05D009369 1.6e-60 237.7 429 36.6
Manes.03G190800 Manihot esculenta HOM05D007369 ORTHO05D009369 2.6e-58 230.3 350 43.4
ATR0706G035 Amborella trichopoda HOM05D007369 ORTHO05D009369 1.0e-57 228.4 448 37.3
Actinidia23432 Actinidia chinensis HOM05D007369 ORTHO05D009369 5.5e-56 222.6 425 40.0
Nn4g26033 Nelumbo nucifera HOM05D007369 ORTHO05D009369 4.6e-55 219.5 420 36.4
Eucgr.B01264 Eucalyptus grandis HOM05D007369 ORTHO05D009369 2.3e-54 217.2 419 36.8
Aqoxy2G03087 Aquilegia oxysepala HOM05D007369 ORTHO05D009369 2.0e-50 204.1 427 36.1
FAN22G0049 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.7e-49 201.1 424 36.6
Cc03_g02400 Coffea canephora HOM05D007369 ORTHO05D009369 2.9e-49 200.3 409 36.9
Dinv44429 Davidia involucrata HOM05D007369 ORTHO05D009369 1.1e-48 198.4 349 39.3
CsaV3_3G014100 Cucumis sativus L. HOM05D007369 ORTHO05D009369 4.2e-48 196.4 378 39.2
MBI19_g37517_MAGBIO Magnolia biondii HOM05D007369 ORTHO05D009369 1.2e-47 194.9 431 35.5
Sed0026345 Sechium edule HOM05D007369 ORTHO05D009369 2.1e-47 194.1 373 38.3
Oeu062882.1 Olea europaea HOM05D007369 ORTHO05D009369 1.8e-46 191.0 343 38.2
Sopen01g029630 Solanum pennellii HOM05D007369 ORTHO05D009369 3.9e-46 189.9 431 34.1
ClCG05G005770 Citrullus lanatus HOM05D007369 ORTHO05D009369 6.7e-46 189.1 378 37.8
Potri.010G031250 Populus trichocarpa HOM05D007369 ORTHO05D009369 1.4e-43 181.4 204 52.0
Nitab4.5_0003067g0040 Nicotiana tabacum HOM05D007369 ORTHO05D009369 5.3e-43 179.5 415 34.9
SalBow2G2600 Salvia bowleyana HOM05D007369 ORTHO05D009369 9.1e-43 178.7 427 34.7
DCAR_002440 Daucus carota HOM05D007369 ORTHO05D009369 3.5e-42 176.8 303 39.6
Solyc01g067700.3 Solanum lycopersicum HOM05D007369 ORTHO05D009369 1.3e-41 174.9 321 36.8
CAN.G223.8 Capsicum annuum HOM05D007369 ORTHO05D009369 1.9e-40 171.0 439 33.5
vmacro08206 Vaccinium macrocarpon HOM05D007369 ORTHO05D009369 6.1e-39 166.0 446 32.3
MELO3C031713.2 Cucumis melo HOM05D007369 ORTHO05D009369 3.0e-38 163.7 393 34.6
SGA_v2.0_scaffold57G20253 Striga asiatica HOM05D007369 ORTHO05D009369 2.0e-37 161.0 420 31.7
Migut.G00214 Erythranthe guttata HOM05D007369 ORTHO05D009369 9.1e-35 152.1 166 49.4
Sabra08G0148500 Salix brachista HOM05D007369 ORTHO05D009369 9.1e-35 152.1 152 55.3
Lalb_Chr20g0118161 Lupinus albus HOM05D007369 ORTHO05D009369 3.8e-33 146.7 215 43.3
TWI73G1273 Tripterygium wilfordii HOM05D007369 ORTHO05D009369 1.5e-32 144.8 221 41.6
Peaxi162Scf00386g00219 Petunia axillaris HOM05D007369 ORTHO05D009369 9.4e-32 142.1 288 35.4
HanXRQChr03g0080111 Helianthus annuus HOM05D007369 ORTHO05D009369 1.8e-30 137.9 280 37.9
Sc13g0003630 Simmondsia chinensis HOM05D007369 ORTHO05D009369 1.8e-30 137.9 355 34.1
Mapoly0126s0031 Marchantia polymorpha HOM05D007369 ORTHO05D009369 2.3e-30 137.5 320 32.5
Nitab4.5_0000197g0120 Nicotiana tabacum HOM05D007369 ORTHO05D009369 3.4e-29 133.7 408 28.9
THA.LOC104820236 Tarenaya hassleriana HOM05D007369 ORTHO05D009369 9.8e-29 132.1 392 31.6
Atru.chr4.2750 Acer truncatum HOM05D007369 ORTHO05D009369 1.7e-28 131.3 181 45.9
ECA240G2128 Erigeron canadensis HOM05D007369 ORTHO05D009369 1.1e-27 128.6 379 31.9
FAN17G3125 Fragaria x ananassa HOM05D007369 ORTHO05D009369 1.1e-27 128.6 115 60.0
MD16G1175500 Malus domestica HOM05D007369 ORTHO05D009369 1.4e-27 128.3 255 36.9
Atru.chr4.2749 Acer truncatum HOM05D007369 ORTHO05D009369 3.5e-26 123.6 149 48.3
MD16G1175700 Malus domestica HOM05D007369 ORTHO05D009369 7.5e-21 105.9 84 63.1
TAR365G0645 Trochodendron aralioides HOM05D007369 ORTHO05D009369 2.2e-20 104.4 249 32.5
AagrBONN_evm.TU.Sc2ySwM_362.2687 Anthoceros agrestis HOM05D007369 ORTHO05D009369 3.3e-16 90.5 70 58.6
Zm00001eb410560 Zea mays HOM05D007369 ORTHO05D009369 1.6e-15 88.2 154 38.3
VMungo0647G1723 Vigna mungo HOM05D007369 ORTHO05D009369 2.8e-15 87.4 79 60.8
Hund24911 Selenicereus undatus HOM05D007369 ORTHO05D009369 5.2e-14 83.2 409 28.1
SEGI_26846 Sequoiadendron giganteum HOM05D007369 ORTHO05D009369 1.6e-10 71.6 193 30.6
Lsat_1_v5_gn_5_50560 Lactuca sativa HOM05D007369 ORTHO05D009369 3.0e-09 67.4 126 39.7
Mapoly0008s0171 Marchantia polymorpha HOM05D007369 ORTHO05D009369 4.3e-08 63.5 283 25.4
MD16G1175600 Malus domestica HOM05D007369 ORTHO05D009369 2.3e-06 57.8 76 44.7
PGSC0003DMG401010654 Solanum tuberosum HOM05D007369 ORTHO05D009369 6.8e-06 56.2 51 52.9


User provided reference genes

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