Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3735 Trifolium pratense HOM05D005317 ORTHO05D005146 1.8e-104 382.5 182 100.0
Medtr4g097480 Medicago truncatula HOM05D005317 ORTHO05D005146 9.1e-80 300.4 182 85.7
Psat0ss26165g0240 Pisum sativum HOM05D005317 ORTHO05D005146 5.9e-63 244.6 185 70.3
Phvul.003G233000 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 3.6e-52 208.8 187 63.1
Lj4g0026806 Lotus japonicus HOM05D005317 ORTHO05D005146 4.4e-50 201.8 191 61.8
VMungo0251G0145 Vigna mungo HOM05D005317 ORTHO05D005146 1.3e-46 190.3 184 59.2
Glyma.05G108400 Glycine max HOM05D005317 ORTHO05D005146 1.1e-45 187.2 189 61.9
Glyma.17G158600 Glycine max HOM05D005317 ORTHO05D005146 2.3e-43 179.5 189 58.7
Lalb_Chr09g0335521 Lupinus albus HOM05D005317 ORTHO05D005146 4.6e-39 165.2 170 52.9
QL06p038960 Quercus lobata HOM05D005317 ORTHO05D005146 1.6e-28 130.2 180 48.3
Ciclev10026641m.g Citrus clementina HOM05D005317 ORTHO05D005146 1.2e-26 124.0 171 45.0
Manes.13G109200 Manihot esculenta HOM05D005317 ORTHO05D005146 1.2e-26 124.0 168 45.8
Potri.007G007000 Populus trichocarpa HOM05D005317 ORTHO05D005146 4.2e-24 115.5 170 42.9
Prupe.6G217200 Prunus persica HOM05D005317 ORTHO05D005146 9.3e-24 114.4 175 40.0
CSS0048752 Camellia sinensis var. sinensis HOM05D005317 ORTHO05D005146 1.0e-22 110.9 163 39.9
Haze_15027 Corylus avellana HOM05D005317 ORTHO05D005146 1.0e-22 110.9 162 42.0
TAR381G0867 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.0e-22 110.9 148 41.9
Thecc.01G076000 Theobroma cacao HOM05D005317 ORTHO05D005146 2.3e-22 109.8 171 42.1
Sabra07G0005300 Salix brachista HOM05D005317 ORTHO05D005146 5.1e-22 108.6 168 39.9
COL.COLO4_28461 Corchorus olitorius HOM05D005317 ORTHO05D005146 6.6e-22 108.2 163 40.5
TAR376G0587 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.1e-21 107.5 157 43.3
Gohir.D12G076800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.3e-21 105.9 163 41.7
Gorai.008G085600 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.3e-21 105.9 163 41.7
Gohir.A12G080100 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.3e-21 105.5 163 41.7
Duzib187G1956 Durio zibethinus HOM05D005317 ORTHO05D005146 9.6e-21 104.4 171 38.6
Gorai.003G032200 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.6e-20 103.6 165 39.4
TAR628G1097 Trochodendron aralioides HOM05D005317 ORTHO05D005146 1.6e-20 103.6 160 36.2
Atru.chr3.1057 Acer truncatum HOM05D005317 ORTHO05D005146 3.6e-20 102.4 175 38.3
COL.COLO4_11612 Corchorus olitorius HOM05D005317 ORTHO05D005146 4.8e-20 102.1 172 40.1
FvH4_1g18210 Fragaria vesca HOM05D005317 ORTHO05D005146 1.4e-19 100.5 175 36.6
RcHm_v2.0_Chr2g0108721 Rosa chinensis HOM05D005317 ORTHO05D005146 1.4e-19 100.5 173 38.7
CiPaw.01G002200 Carya illinoinensis HOM05D005317 ORTHO05D005146 2.4e-19 99.8 175 40.6
FAN19G1325 Fragaria x ananassa HOM05D005317 ORTHO05D005146 3.1e-19 99.4 175 36.0
Gohir.A02G149800 Gossypium hirsutum HOM05D005317 ORTHO05D005146 3.1e-19 99.4 176 36.4
Hma1.2p1_1139F.1_g260880 Hydrangea macrophylla HOM05D005317 ORTHO05D005146 3.1e-19 99.4 160 40.0
Oeu021452.1 Olea europaea HOM05D005317 ORTHO05D005146 3.1e-19 99.4 168 38.7
Oeu047228.1 Olea europaea HOM05D005317 ORTHO05D005146 4.0e-19 99.0 163 39.9
Gohir.D03G030600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.9e-19 98.2 165 39.4
Cfa004386 Carpinus fangiana HOM05D005317 ORTHO05D005146 2.0e-18 96.7 177 36.2
Dinv23042 Davidia involucrata HOM05D005317 ORTHO05D005146 4.5e-18 95.5 145 42.8
Dinv26957 Davidia involucrata HOM05D005317 ORTHO05D005146 5.8e-18 95.1 124 46.0
Rhsim07G0217500 Rhododendron simsii HOM05D005317 ORTHO05D005146 4.9e-17 92.0 162 36.4
Eucgr.H02331 Eucalyptus grandis HOM05D005317 ORTHO05D005146 6.4e-17 91.7 170 40.0
SalBow4G3082 Salvia bowleyana HOM05D005317 ORTHO05D005146 8.4e-17 91.3 164 38.4
FAN23G2069 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.1e-16 90.9 174 35.6
Oeu053645.1 Olea europaea HOM05D005317 ORTHO05D005146 1.4e-16 90.5 177 36.2
FAN28G2997 Fragaria x ananassa HOM05D005317 ORTHO05D005146 1.9e-16 90.1 174 35.6
Manes.05G183500 Manihot esculenta HOM05D005317 ORTHO05D005146 3.2e-16 89.4 170 37.6
FAN26G0581 Fragaria x ananassa HOM05D005317 ORTHO05D005146 4.2e-16 89.0 174 35.6
SalBow3G0220 Salvia bowleyana HOM05D005317 ORTHO05D005146 4.2e-16 89.0 160 35.6
MSTRG.23654 Avicennia marina HOM05D005317 ORTHO05D005146 1.2e-15 87.4 167 36.5
DCAR_020064 Daucus carota HOM05D005317 ORTHO05D005146 1.6e-15 87.0 154 37.0
Actinidia11964 Actinidia chinensis HOM05D031334 ORTHO05D026410 2.1e-15 86.7 162 36.4
Nn5g30662 Nelumbo nucifera HOM05D005317 ORTHO05D005146 2.1e-15 86.7 146 38.4
Potri.014G013000 Populus trichocarpa HOM05D005317 ORTHO05D005146 2.1e-15 86.7 160 38.8
TPR.G13020 Trifolium pratense HOM05D005317 ORTHO05D005146 4.6e-15 85.5 153 39.9
SGA_v2.0_scaffold15G07499 Striga asiatica HOM05D005317 ORTHO05D005146 1.0e-14 84.3 164 35.4
Oeu014288.1 Olea europaea HOM05D005317 ORTHO05D005146 2.3e-14 83.2 172 33.7
GSVIVG01009301001 Vitis vinifera HOM05D005317 ORTHO05D005146 2.3e-14 83.2 184 33.7
Actinidia16411 Actinidia chinensis HOM05D005317 ORTHO05D005146 3.0e-14 82.8 151 37.7
Phvul.001G030800 Phaseolus vulgaris HOM05D005317 ORTHO05D005146 5.1e-14 82.0 158 39.2
Aqoxy6G02455 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 6.7e-14 81.6 162 38.9
Sabra14G0007800 Salix brachista HOM05D005317 ORTHO05D005146 6.7e-14 81.6 153 38.6
VMungo0647G1960 Vigna mungo HOM05D005317 ORTHO05D005146 6.7e-14 81.6 158 36.7
Prupe.1G419300 Prunus persica HOM05D005317 ORTHO05D005146 1.1e-13 80.9 159 36.5
Thecc.08G084700 Theobroma cacao HOM05D005317 ORTHO05D005146 1.1e-13 80.9 154 33.8
Gorai.010G027300 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.9e-13 80.1 152 37.5
Actinidia29632 Actinidia chinensis HOM05D005317 ORTHO05D005146 2.5e-13 79.7 122 40.2
Cc10_g07630 Coffea canephora HOM05D005317 ORTHO05D005146 2.5e-13 79.7 165 35.2
Gohir.A06G025600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.5e-13 79.7 152 35.5
Medtr1g017500 Medicago truncatula HOM05D005317 ORTHO05D005146 2.5e-13 79.7 152 37.5
Cfa013739 Carpinus fangiana HOM05D005317 ORTHO05D005146 4.3e-13 79.0 167 32.9
Migut.C00473 Erythranthe guttata HOM05D005317 ORTHO05D005146 1.3e-12 77.4 162 37.0
Gohir.A11G212400 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.3e-12 77.4 165 34.5
Gohir.D06G022700 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.6e-12 77.0 152 35.5
Actinidia10221 Actinidia chinensis HOM05D005317 ORTHO05D005146 2.1e-12 76.6 106 43.4
Gorai.007G226200 Gossypium raimondii HOM05D005317 ORTHO05D005146 3.6e-12 75.9 160 35.0
Psat6g017280 Pisum sativum HOM05D005317 ORTHO05D005146 3.6e-12 75.9 143 40.6
Haze_22391 Corylus avellana HOM05D005317 ORTHO05D005146 1.1e-11 74.3 182 33.5
Gohir.D05G215300 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.4e-11 73.9 162 29.6
Glyma.06G048700 Glycine max HOM05D005317 ORTHO05D005146 1.8e-11 73.6 159 34.0
Gohir.A01G123600 Gossypium hirsutum HOM05D005317 ORTHO05D005146 4.0e-11 72.4 152 27.0
MSTRG.25022 Avicennia marina HOM05D005317 ORTHO05D005146 5.3e-11 72.0 165 32.1
Sed0021979 Sechium edule HOM05D005317 ORTHO05D005146 9.0e-11 71.2 155 35.5
ClCG01G017790 Citrullus lanatus HOM05D005317 ORTHO05D005146 1.2e-10 70.9 156 35.3
Gohir.D01G111432 Gossypium hirsutum HOM05D005317 ORTHO05D005146 1.2e-10 70.9 152 26.3
Gorai.002G136200 Gossypium raimondii HOM05D005317 ORTHO05D005146 1.5e-10 70.5 151 26.5
Sc24g0002340 Simmondsia chinensis HOM05D005317 ORTHO05D005146 1.5e-10 70.5 163 30.7
Eucgr.F00095 Eucalyptus grandis HOM05D005317 ORTHO05D005146 2.0e-10 70.1 158 31.6
Lj5g0002019 Lotus japonicus HOM05D005317 ORTHO05D005146 2.0e-10 70.1 159 37.7
Migut.H00325 Erythranthe guttata HOM05D005317 ORTHO05D005146 2.6e-10 69.7 174 32.8
Ciclev10027255m.g Citrus clementina HOM05D005317 ORTHO05D005146 3.4e-10 69.3 159 33.3
Thecc.08G084600 Theobroma cacao HOM05D005317 ORTHO05D005146 4.5e-10 68.9 168 30.4
CiPaw.08G052300 Carya illinoinensis HOM05D005317 ORTHO05D005146 7.6e-10 68.2 146 34.9
TPR.G13134 Trifolium pratense HOM05D014755 ORTHO05D005146 9.9e-10 67.8 134 36.6
Atru.chr13.870 Acer truncatum HOM05D005317 ORTHO05D005146 1.3e-09 67.4 162 33.3
CDE07G0499 Ceratophyllum demersum HOM05D000271 ORTHO05D009467 1.7e-09 67.0 170 32.4
Lalb_Chr24g0399511 Lupinus albus HOM05D005317 ORTHO05D005146 2.2e-09 66.6 140 36.4
MBI16_g41241_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 2.9e-09 66.2 149 35.6
EL10Ac6g13373 Beta vulgaris HOM05D005317 ORTHO05D005146 3.8e-09 65.9 100 37.0
CiPaw.07G172100 Carya illinoinensis HOM05D005317 ORTHO05D005146 4.9e-09 65.5 159 31.4
Gohir.A05G212000 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.4e-09 65.1 176 29.5
Glyma.14G089084 Glycine max HOM05D005317 ORTHO05D005146 1.1e-08 64.3 158 34.2
DCAR_009867 Daucus carota HOM05D005317 ORTHO05D005146 1.4e-08 63.9 167 29.3
Cfa013738 Carpinus fangiana HOM05D005317 ORTHO05D005146 4.2e-08 62.4 147 31.3
Gorai.002G136100 Gossypium raimondii HOM05D005317 ORTHO05D005146 4.2e-08 62.4 144 28.5
Lj4C75G10 Lonicera japonica HOM05D002048 ORTHO05D002146 5.5e-08 62.0 109 40.4
Cpa.g.c31093.6 Carica papaya HOM05D005317 ORTHO05D005146 7.1e-08 61.6 170 31.8
COL.COLO4_28460 Corchorus olitorius HOM05D005317 ORTHO05D005146 7.1e-08 61.6 172 25.6
Gorai.009G222000 Gossypium raimondii HOM05D005317 ORTHO05D005146 7.1e-08 61.6 161 28.0
ATR0739G163 Amborella trichopoda HOM05D005317 ORTHO05D005146 9.3e-08 61.2 167 32.3
ECA246G5098 Erigeron canadensis HOM05D005317 ORTHO05D005146 9.3e-08 61.2 166 31.9
Sopen04g031150 Solanum pennellii HOM05D005317 ORTHO05D005146 1.2e-07 60.8 164 32.3
FAN27G2237 Fragaria x ananassa HOM05D030376 ORTHO05D005146 2.1e-07 60.1 181 29.8
Gohir.A01G123550 Gossypium hirsutum HOM05D005317 ORTHO05D005146 2.1e-07 60.1 144 28.5
SGA_v2.0_scaffold238G43910 Striga asiatica HOM05D005317 ORTHO05D005146 2.1e-07 60.1 167 31.1
AUR62037856 Chenopodium quinoa HOM05D051035 ORTHO05D005146 2.7e-07 59.7 97 36.1
MBI16_g06081_MAGBIO Magnolia biondii HOM05D005317 ORTHO05D005146 3.5e-07 59.3 106 40.6
PGSC0003DMG400021404 Solanum tuberosum HOM05D061607 ORTHO05D005146 3.5e-07 59.3 160 32.5
Glyma.17G232900 Glycine max HOM05D005317 ORTHO05D005146 4.6e-07 58.9 154 31.2
Sc03g0002520 Simmondsia chinensis HOM05D005317 ORTHO05D005146 4.6e-07 58.9 97 35.1
FAN20G0770 Fragaria x ananassa HOM05D030376 ORTHO05D005146 7.9e-07 58.2 183 28.4
VMungo1309G2313 Vigna mungo HOM05D005317 ORTHO05D005146 7.9e-07 58.2 148 33.1
ECA232G3441 Erigeron canadensis HOM05D005317 ORTHO05D005146 1.3e-06 57.4 158 32.3
Rhsim08G0090500 Rhododendron simsii HOM05D005317 ORTHO05D005146 1.3e-06 57.4 169 32.5
AUR62041096 Chenopodium quinoa HOM05D051035 ORTHO05D005146 1.8e-06 57.0 97 36.1
Aqoxy6G02509 Aquilegia oxysepala HOM05D005317 ORTHO05D005146 2.3e-06 56.6 137 35.8
ClCG05G026550 Citrullus lanatus HOM05D029900 ORTHO05D005146 3.0e-06 56.2 148 30.4
Gohir.D01G111366 Gossypium hirsutum HOM05D005317 ORTHO05D005146 6.7e-06 55.1 83 36.1
Lsat_1_v5_gn_3_86260 Lactuca sativa HOM05D005317 ORTHO05D005146 8.7e-06 54.7 144 32.6


User provided reference genes

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