Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37341 Trifolium pratense HOM05D003557 ORTHO05D001267 3.1e-292 1007.7 495 100.0
Medtr8g093480 Medicago truncatula HOM05D003557 ORTHO05D001267 1.6e-203 713.0 482 75.9
Ca_17647_v3 Cicer arietinum L. HOM05D003557 ORTHO05D001267 1.0e-202 710.3 491 74.9
Lj4g0000833 Lotus japonicus HOM05D003557 ORTHO05D001267 2.5e-140 503.1 495 58.6
Lalb_Chr07g0184471 Lupinus albus HOM05D003557 ORTHO05D001267 8.4e-136 488.0 503 55.5
Glyma.04G214200 Glycine max HOM05D003557 ORTHO05D001267 4.2e-127 459.1 505 54.7
Phvul.009G149100 Phaseolus vulgaris HOM05D003557 ORTHO05D001267 1.3e-125 454.1 516 52.3
VMungo0647G1249 Vigna mungo HOM05D003557 ORTHO05D001267 3.2e-119 433.0 516 51.7
Ca_16932_v3 Cicer arietinum L. HOM05D003557 ORTHO05D001267 9.6e-116 421.4 526 49.6
Glyma.06G152200 Glycine max HOM05D003557 ORTHO05D001267 6.9e-114 415.2 510 51.0
arahy.Tifrunner.gnm1.ann1.A43QXH Arachis hypogaea HOM05D003557 ORTHO05D001267 8.2e-107 391.7 533 46.3
Lj1g0022982 Lotus japonicus HOM05D003557 ORTHO05D001267 1.8e-106 390.6 543 47.3
Lalb_Chr08g0238451 Lupinus albus HOM05D003557 ORTHO05D001267 4.5e-105 386.0 501 50.3
Lalb_Chr11g0068351 Lupinus albus HOM05D003557 ORTHO05D001267 8.5e-104 381.7 497 48.9
TPR.G34650 Trifolium pratense HOM05D003557 ORTHO05D001267 2.5e-103 380.2 554 43.7
Lalb_Chr23g0272561 Lupinus albus HOM05D003557 ORTHO05D001267 1.4e-101 374.4 469 49.9
arahy.Tifrunner.gnm1.ann1.J2NKIW Arachis hypogaea HOM05D003557 ORTHO05D001267 1.5e-97 360.9 393 52.2
Medtr3g095960 Medicago truncatula HOM05D003557 ORTHO05D001267 3.9e-93 346.3 683 37.0
Psat5g059960 Pisum sativum HOM05D003557 ORTHO05D001267 1.2e-89 334.7 610 40.7
arahy.Tifrunner.gnm1.ann1.N565XM Arachis hypogaea HOM05D003557 ORTHO05D001267 2.2e-88 330.5 397 49.1
CiPaw.03G128800 Carya illinoinensis HOM05D003557 ORTHO05D001267 4.5e-65 253.1 511 37.0
Sabra07G0088300 Salix brachista HOM05D003557 ORTHO05D001267 2.3e-64 250.8 483 38.1
Potri.007G107800 Populus trichocarpa HOM05D003557 ORTHO05D001267 1.1e-63 248.4 475 37.9
Cfa002823 Carpinus fangiana HOM05D003557 ORTHO05D001267 2.1e-62 244.2 546 35.5
Potri.005G061100 Populus trichocarpa HOM05D003557 ORTHO05D001267 3.4e-60 236.9 485 35.9
QL06p029317 Quercus lobata HOM05D003557 ORTHO05D001267 3.4e-60 236.9 506 35.8
Sabra05G0051500 Salix brachista HOM05D003557 ORTHO05D001267 9.8e-60 235.3 483 36.6
Prupe.6G159100 Prunus persica HOM05D003557 ORTHO05D001267 2.2e-59 234.2 478 35.4
MD15G1337600 Malus domestica HOM05D003557 ORTHO05D001267 2.3e-56 224.2 497 33.4
Dinv24328 Davidia involucrata HOM05D003557 ORTHO05D001267 3.3e-55 220.3 511 36.2
Manes.12G153500 Manihot esculenta HOM05D003557 ORTHO05D001267 2.0e-52 211.1 480 33.3
TWI75G1801 Tripterygium wilfordii HOM05D003557 ORTHO05D001267 1.7e-51 208.0 472 34.7
MD01G1013400 Malus domestica HOM05D003557 ORTHO05D001267 5.4e-50 203.0 504 33.1
Thecc.01G127600 Theobroma cacao HOM05D003557 ORTHO05D001267 9.2e-50 202.2 571 30.5
Duzib147G0862 Durio zibethinus HOM05D003557 ORTHO05D001267 1.3e-48 198.4 537 31.3
Glyma.05G190500 Glycine max HOM05D003557 ORTHO05D001267 1.5e-47 194.9 477 34.2
Gorai.003G068000 Gossypium raimondii HOM05D003557 ORTHO05D001267 9.5e-47 192.2 586 29.7
CsaV3_6G041740 Cucumis sativus L. HOM05D003557 ORTHO05D001267 4.7e-46 189.9 527 31.9
TWI31G0955 Tripterygium wilfordii HOM05D003557 ORTHO05D001267 1.1e-45 188.7 501 32.5
Gohir.A11G227304 Gossypium hirsutum HOM05D003557 ORTHO05D001267 1.4e-45 188.3 592 28.9
CANSAT01G1165 Cannabis sativa HOM05D003557 ORTHO05D001267 1.2e-44 185.3 536 29.3
Duzib187G0404 Durio zibethinus HOM05D003557 ORTHO05D001267 7.5e-44 182.6 508 30.5
Duzib160G0654 Durio zibethinus HOM05D003557 ORTHO05D001267 2.2e-43 181.0 561 30.7
ClCG01G015510 Citrullus lanatus HOM05D003557 ORTHO05D001267 4.9e-43 179.9 502 31.1
MELO3C008046.2 Cucumis melo HOM05D003557 ORTHO05D001267 1.9e-42 177.9 529 29.7
Sed0024902 Sechium edule HOM05D003557 ORTHO05D001267 4.6e-41 173.3 495 30.5
Atru.chr4.835 Acer truncatum HOM05D003557 ORTHO05D001267 8.6e-40 169.1 418 33.3
RcHm_v2.0_Chr2g0120281 Rosa chinensis HOM05D003557 ORTHO05D001267 1.1e-39 168.7 533 31.9
FAN23G1052 Fragaria x ananassa HOM05D003557 ORTHO05D001267 9.5e-39 165.6 559 29.2
Nn5g28628 Nelumbo nucifera HOM05D003557 ORTHO05D001267 8.9e-37 159.1 573 28.1
FAN26G1648 Fragaria x ananassa HOM05D003557 ORTHO05D001267 1.2e-36 158.7 531 31.3
FAN19G1884 Fragaria x ananassa HOM05D003557 ORTHO05D001267 2.6e-36 157.5 540 30.7
VMungo0251G0832 Vigna mungo HOM05D003557 ORTHO05D001267 5.8e-36 156.4 495 34.5
FvH4_1g24100 Fragaria vesca HOM05D003557 ORTHO05D001267 9.9e-36 155.6 531 31.1
TAR376G0938 Trochodendron aralioides HOM05D003557 ORTHO05D001267 1.7e-35 154.8 510 29.0
FAN28G2033 Fragaria x ananassa HOM05D003557 ORTHO05D001267 2.4e-34 151.0 530 30.4
EL10Ac6g15275 Beta vulgaris HOM05D003557 ORTHO05D001267 2.7e-33 147.5 415 34.0
Gorai.005G122500 Gossypium raimondii HOM05D003557 ORTHO05D001267 7.8e-33 146.0 521 29.0
Cpa.g.sc42.122 Carica papaya HOM05D003557 ORTHO05D001267 1.3e-32 145.2 334 32.0
TAR625G0023 Trochodendron aralioides HOM05D003557 ORTHO05D001267 8.6e-32 142.5 462 31.0
AUR62003603 Chenopodium quinoa HOM05D003557 ORTHO05D001267 1.5e-31 141.7 521 29.8
Gohir.A11G227302 Gossypium hirsutum HOM05D003557 ORTHO05D001267 9.5e-31 139.0 575 27.1
MBI03_g11313_MAGBIO Magnolia biondii HOM05D003557 ORTHO05D001267 1.2e-30 138.7 325 32.6
Gohir.D02G108001 Gossypium hirsutum HOM05D003557 ORTHO05D001267 3.6e-30 137.1 363 30.9
CSS0011515 Camellia sinensis var. sinensis HOM05D003557 ORTHO05D001267 1.1e-29 135.6 395 30.6
Hund04477 Selenicereus undatus HOM05D003557 ORTHO05D001267 2.4e-29 134.4 385 31.2
AUR62017914 Chenopodium quinoa HOM05D003557 ORTHO05D001267 3.1e-29 134.0 516 28.9
Haze_25122 Corylus avellana HOM05D003557 ORTHO05D001267 5.2e-29 133.3 542 29.5
Lj2A603T36 Lonicera japonica HOM05D003557 ORTHO05D001267 2.6e-28 131.0 484 28.9
Sc07g0001690 Simmondsia chinensis HOM05D003557 ORTHO05D001267 2.6e-28 131.0 377 34.7
Rhsim10G0136500 Rhododendron simsii HOM05D003557 ORTHO05D001267 1.7e-27 128.3 485 29.9
MBI06_g18871_MAGBIO Magnolia biondii HOM05D003557 ORTHO05D001267 3.8e-27 127.1 427 30.2
COL.COLO4_14021 Corchorus olitorius HOM05D003557 ORTHO05D001267 6.4e-27 126.3 331 32.6
Rhsim10G0136700 Rhododendron simsii HOM05D003557 ORTHO05D001267 1.4e-26 125.2 475 30.3
TAR628G1562 Trochodendron aralioides HOM05D003557 ORTHO05D001267 1.9e-26 124.8 463 27.2
Gohir.A03G087300 Gossypium hirsutum HOM05D003557 ORTHO05D001267 5.4e-26 123.2 486 28.6
VMungo1309G1084 Vigna mungo HOM05D003557 ORTHO05D001267 6.6e-24 116.3 231 35.5
Eucgr.I00225 Eucalyptus grandis HOM05D003557 ORTHO05D001267 1.9e-23 114.8 276 35.5
Dinv25812 Davidia involucrata HOM05D003557 ORTHO05D001267 5.6e-23 113.2 297 33.7
Actinidia20097 Actinidia chinensis HOM05D003557 ORTHO05D001267 1.6e-22 111.7 309 34.3
Aqoxy5G02196 Aquilegia oxysepala HOM05D003557 ORTHO05D001267 1.4e-21 108.6 379 29.3
Ah.03g146750 Amaranthus hybridus HOM05D003557 ORTHO05D001267 4.0e-21 107.1 483 26.5
PGR102G0661 Punica granatum HOM05D003557 ORTHO05D001267 2.2e-19 101.3 400 26.2
vmacro12862 Vaccinium macrocarpon HOM05D003557 ORTHO05D001267 4.9e-19 100.1 321 32.1
PSO063G0467 Papaver somniferum HOM05D003557 ORTHO05D001267 6.0e-17 93.2 367 29.2
Oeu000781.1 Olea europaea HOM05D003557 ORTHO05D001267 3.0e-16 90.9 280 30.7
Sed0009753 Sechium edule HOM05D003557 ORTHO05D001267 6.6e-16 89.7 340 25.0
HPP92_013320 Vanilla planifolia HOM05D003557 ORTHO05D001267 9.6e-15 85.9 235 29.4
GSVIVG01010035001 Vitis vinifera HOM05D003557 ORTHO05D001267 1.6e-14 85.1 320 30.0
Zm00001eb417000 Zea mays HOM05D003557 ORTHO05D001267 6.2e-14 83.2 187 34.2
PSO782G0500 Papaver somniferum HOM05D003557 ORTHO05D001267 1.4e-13 82.0 372 28.2
Os08g0135800 Oryza sativa ssp. japonica HOM05D003557 ORTHO05D001267 6.9e-13 79.7 195 31.3
Migut.N03235 Erythranthe guttata HOM05D003557 ORTHO05D001267 1.5e-12 78.6 276 28.6
DCAR_010881 Daucus carota HOM05D003557 ORTHO05D001267 5.8e-12 76.6 299 27.1
Cc00_g20050 Coffea canephora HOM05D003557 ORTHO05D001267 1.3e-11 75.5 606 23.4
PGSC0003DMG400024801 Solanum tuberosum HOM05D003557 ORTHO05D001267 6.4e-11 73.2 251 30.7
CAN.G744.17 Capsicum annuum HOM05D003557 ORTHO05D001267 1.9e-10 71.6 277 29.2
Solyc04g064800.4 Solanum lycopersicum HOM05D003557 ORTHO05D001267 2.4e-10 71.2 199 31.7
Actinidia29515 Actinidia chinensis HOM05D003557 ORTHO05D001267 5.4e-10 70.1 354 25.7
Sopen04g026760 Solanum pennellii HOM05D003557 ORTHO05D001267 5.4e-10 70.1 204 31.4
Nitab4.5_0000299g0110 Nicotiana tabacum HOM05D003557 ORTHO05D001267 7.1e-10 69.7 208 31.7
Solyc04g064770.1 Solanum lycopersicum HOM05D003557 ORTHO05D001267 7.1e-10 69.7 235 30.6
Sopen04g026740 Solanum pennellii HOM05D003557 ORTHO05D001267 9.3e-10 69.3 235 30.6
Nitab4.5_0005978g0020 Nicotiana tabacum HOM05D003557 ORTHO05D001267 1.2e-09 68.9 209 34.0
MSTRG.1373 Avicennia marina HOM05D003557 ORTHO05D001267 7.9e-09 66.2 169 34.9
Migut.C01037 Erythranthe guttata HOM05D003557 ORTHO05D001267 6.7e-08 63.2 238 31.5


User provided reference genes

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