Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37260 Trifolium pratense HOM05D004983 ORTHO05D005847 9.4e-150 533.5 268 100.0
Medtr0168s0080 Medicago truncatula HOM05D004983 ORTHO05D005847 3.9e-119 431.8 265 85.7
TPR.G19166 Trifolium pratense HOM05D004983 ORTHO05D005847 5.2e-116 421.4 221 95.5
Glyma.06G188000 Glycine max HOM05D004983 ORTHO05D005847 1.4e-108 396.7 269 76.2
Lalb_Chr08g0236081 Lupinus albus HOM05D004983 ORTHO05D005847 6.8e-108 394.4 277 72.9
Glyma.04G177000 Glycine max HOM05D004983 ORTHO05D005847 1.2e-104 383.6 269 74.3
VMungo1309G2496 Vigna mungo HOM05D004983 ORTHO05D005847 2.1e-104 382.9 242 80.2
Phvul.009G183500 Phaseolus vulgaris HOM05D004983 ORTHO05D005847 1.4e-100 370.2 265 74.0
arahy.Tifrunner.gnm1.ann1.GD66SW Arachis hypogaea HOM05D004983 ORTHO05D005847 5.8e-99 364.8 235 78.7
CANSAT80G1912 Cannabis sativa HOM05D004983 ORTHO05D005847 2.4e-97 359.4 245 73.1
arahy.Tifrunner.gnm1.ann1.TQ2Z41 Arachis hypogaea HOM05D004983 ORTHO05D005847 4.6e-96 355.1 235 77.4
Gohir.D10G187500 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.3e-95 353.6 237 74.7
MD06G1184000 Malus domestica HOM05D004983 ORTHO05D005847 1.7e-95 353.2 254 71.7
CsaV3_1G001940 Cucumis sativus L. HOM05D004983 ORTHO05D005847 3.9e-95 352.1 240 73.3
Ciclev10021875m.g Citrus clementina HOM05D004983 ORTHO05D005847 5.6e-94 348.2 240 73.8
QL10p014085 Quercus lobata HOM05D004983 ORTHO05D005847 9.6e-94 347.4 244 73.4
FvH4_5g15990 Fragaria vesca HOM05D004983 ORTHO05D005847 1.6e-93 346.7 234 75.2
Potri.012G072800 Populus trichocarpa HOM05D004983 ORTHO05D005847 1.6e-93 346.7 233 75.1
Prupe.5G182700 Prunus persica HOM05D004983 ORTHO05D005847 1.6e-93 346.7 246 73.2
Haze_07411 Corylus avellana HOM05D004983 ORTHO05D005847 8.1e-93 344.4 267 67.0
FAN18G0171 Fragaria x ananassa HOM05D004983 ORTHO05D005847 6.9e-92 341.3 230 74.8
GSVIVG01008095001 Vitis vinifera HOM05D004983 ORTHO05D005847 2.0e-91 339.7 239 71.5
FAN04G0333 Fragaria x ananassa HOM05D004983 ORTHO05D005847 4.4e-91 338.6 231 73.6
Thecc.K0001100 Theobroma cacao HOM05D004983 ORTHO05D005847 9.9e-91 337.4 241 71.4
RcHm_v2.0_Chr7g0180081 Rosa chinensis HOM05D004983 ORTHO05D005847 1.3e-90 337.0 247 71.3
FAN13G0935 Fragaria x ananassa HOM05D004983 ORTHO05D005847 2.9e-90 335.9 266 66.2
Sabra12G0052000 Salix brachista HOM05D004983 ORTHO05D005847 8.4e-90 334.3 250 70.0
Manes.06G098600 Manihot esculenta HOM05D004983 ORTHO05D005847 1.1e-89 334.0 286 64.0
Eucgr.B00384 Eucalyptus grandis HOM05D004983 ORTHO05D005847 3.2e-89 332.4 246 68.3
Atru.chr9.2363 Acer truncatum HOM05D004983 ORTHO05D005847 2.1e-88 329.7 245 69.0
Lj1g0016910 Lotus japonicus HOM05D004983 ORTHO05D005847 2.1e-88 329.7 200 82.0
TAR374G1152 Trochodendron aralioides HOM05D000005 ORTHO05D000012 3.5e-88 328.9 253 68.8
CiPaw.12G021900 Carya illinoinensis HOM05D004983 ORTHO05D005847 4.6e-88 328.6 241 71.4
COL.COLO4_20718 Corchorus olitorius HOM05D004983 ORTHO05D005847 1.0e-87 327.4 248 67.7
Thhalv10014312m.g Eutrema salsugineum HOM05D004983 ORTHO05D005847 1.0e-87 327.4 231 69.3
Nitab4.5_0008162g0040 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.3e-87 327.0 225 73.3
Duzib205G0093 Durio zibethinus HOM05D004983 ORTHO05D005847 3.3e-86 322.4 232 69.8
AUR62021780 Chenopodium quinoa HOM05D004983 ORTHO05D005847 5.6e-86 321.6 236 68.2
Carub.0006s1121 Capsella rubella HOM05D004983 ORTHO05D005847 9.6e-86 320.9 237 67.5
HanXRQChr02g0045351 Helianthus annuus HOM05D004983 ORTHO05D005847 9.6e-86 320.9 219 73.1
vmacro19336 Vaccinium macrocarpon HOM05D004983 ORTHO05D005847 9.6e-86 320.9 274 61.3
CAN.G999.9 Capsicum annuum HOM05D004983 ORTHO05D005847 1.3e-85 320.5 231 70.6
AT5G13050 Arabidopsis thaliana HOM05D004983 ORTHO05D005847 2.1e-85 319.7 241 66.8
Rhsim08G0163200 Rhododendron simsii HOM05D004983 ORTHO05D005847 2.1e-85 319.7 284 60.6
C09p64060 Brassica napus HOM05D004983 ORTHO05D005847 2.8e-85 319.3 242 66.9
AUR62008315 Chenopodium quinoa HOM05D004983 ORTHO05D005847 2.8e-85 319.3 230 70.0
Lsat_1_v5_gn_1_11380 Lactuca sativa HOM05D004983 ORTHO05D005847 2.8e-85 319.3 244 66.8
Dinv13111 Davidia involucrata HOM05D004983 ORTHO05D005847 3.6e-85 318.9 265 65.3
Aa31LG3G14620 Aethionema arabicum HOM05D004983 ORTHO05D005847 4.8e-85 318.5 243 64.6
Hma1.2p1_0572F.1_g181120 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 6.2e-85 318.2 225 72.0
Oeu022186.1 Olea europaea HOM05D004983 ORTHO05D005847 6.2e-85 318.2 231 70.6
EL10Ac5g10876 Beta vulgaris HOM05D004983 ORTHO05D005847 8.1e-85 317.8 239 68.2
AL6G23630 Arabidopsis lyrata HOM05D004983 ORTHO05D005847 1.1e-84 317.4 229 67.7
Nitab4.5_0000026g0320 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.1e-84 317.4 225 71.1
Actinidia04943 Actinidia chinensis HOM05D004983 ORTHO05D005847 1.4e-84 317.0 236 69.5
BolC9t59243H Brassica oleracea HOM05D004983 ORTHO05D005847 1.4e-84 317.0 242 66.1
Solyc03g113590.3 Solanum lycopersicum HOM05D004983 ORTHO05D005847 3.1e-84 315.8 227 69.6
Hund04599 Selenicereus undatus HOM05D004983 ORTHO05D005847 4.0e-84 315.5 245 65.7
Sopen03g032630 Solanum pennellii HOM05D004983 ORTHO05D005847 4.0e-84 315.5 227 69.2
A10p25150 Brassica napus HOM05D004983 ORTHO05D005847 5.3e-84 315.1 242 65.7
PGR044G0258 Punica granatum HOM05D004983 ORTHO05D005847 5.3e-84 315.1 230 68.3
BraA10t44577Z Brassica rapa HOM05D004983 ORTHO05D005847 6.9e-84 314.7 242 65.7
CARHR200420 Cardamine hirsuta HOM05D004983 ORTHO05D005847 9.0e-84 314.3 230 67.8
Sp6g30930 Schrenkiella parvula HOM05D004983 ORTHO05D005847 9.0e-84 314.3 243 64.2
Aqoxy3G00847 Aquilegia oxysepala HOM05D004983 ORTHO05D005847 1.5e-83 313.5 242 68.6
BolC2t06531H Brassica oleracea HOM05D004983 ORTHO05D005847 2.0e-83 313.2 229 65.9
Cc04_g16050 Coffea canephora HOM05D004983 ORTHO05D005847 2.6e-83 312.8 226 69.0
PGSC0003DMG400024570 Solanum tuberosum HOM05D004983 ORTHO05D005847 7.6e-83 311.2 220 70.5
QL03p067716 Quercus lobata HOM05D004983 ORTHO05D005847 9.9e-83 310.8 243 63.8
Dinv19894 Davidia involucrata HOM05D004983 ORTHO05D005847 1.7e-82 310.1 259 64.1
BraA02t05144Z Brassica rapa HOM05D001227 ORTHO05D001082 2.2e-82 309.7 245 62.4
PSO591G0429 Papaver somniferum HOM05D004983 ORTHO05D005847 2.2e-82 309.7 232 66.8
BcaNung01856 Brassica carinata HOM05D001227 ORTHO05D001082 2.9e-82 309.3 224 67.0
C02p05860 Brassica napus HOM05D001227 ORTHO05D001082 2.9e-82 309.3 224 67.0
A02p01650 Brassica napus HOM05D001227 ORTHO05D001082 3.8e-82 308.9 240 64.2
QL03p067725 Quercus lobata HOM05D004983 ORTHO05D005847 3.8e-82 308.9 244 63.9
Sc12g0005910 Simmondsia chinensis HOM05D004983 ORTHO05D005847 4.2e-81 305.4 236 64.8
Ah.02g112940 Amaranthus hybridus HOM05D004983 ORTHO05D005847 9.3e-81 304.3 236 65.7
CSS0013980 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 1.6e-80 303.5 244 61.9
Haze_12108 Corylus avellana HOM05D004983 ORTHO05D005847 2.1e-80 303.1 242 62.0
DCAR_016523 Daucus carota HOM05D004983 ORTHO05D005847 2.7e-80 302.8 229 65.9
SGA_v2.0_scaffold25G10860 Striga asiatica HOM05D004983 ORTHO05D005847 7.9e-80 301.2 220 70.0
ECA247G1770 Erigeron canadensis HOM05D004983 ORTHO05D005847 1.0e-79 300.8 278 57.9
Ah.02g112900 Amaranthus hybridus HOM05D004983 ORTHO05D005847 1.5e-78 297.0 241 63.1
CDE07G0592 Ceratophyllum demersum HOM05D004983 ORTHO05D005847 5.6e-78 295.0 250 60.8
Migut.I00071 Erythranthe guttata HOM05D004983 ORTHO05D005847 5.6e-78 295.0 213 70.0
Gohir.A12G051800 Gossypium hirsutum HOM05D004983 ORTHO05D005847 9.6e-78 294.3 244 61.1
Gorai.008G053300 Gossypium raimondii HOM05D004983 ORTHO05D005847 9.6e-78 294.3 226 64.2
Ciclev10032272m.g Citrus clementina HOM05D004983 ORTHO05D005847 1.6e-77 293.5 245 61.6
MELO3C017137.2 Cucumis melo HOM05D004983 ORTHO05D005847 1.6e-77 293.5 244 65.6
Gohir.D12G050100 Gossypium hirsutum HOM05D004983 ORTHO05D005847 1.6e-77 293.5 226 63.7
Thecc.02G237100 Theobroma cacao HOM05D004983 ORTHO05D005847 4.8e-77 292.0 226 63.7
Nn4g22978 Nelumbo nucifera HOM05D004983 ORTHO05D005847 1.1e-76 290.8 230 65.2
Ah.11g048970 Amaranthus hybridus HOM05D004983 ORTHO05D005847 1.4e-76 290.4 247 61.9
Gorai.011G210300 Gossypium raimondii HOM05D004983 ORTHO05D005847 2.4e-76 289.7 237 65.0
Prupe.1G263300 Prunus persica HOM05D004983 ORTHO05D005847 2.4e-76 289.7 234 62.0
TWI75G1117 Tripterygium wilfordii HOM05D004983 ORTHO05D005847 3.1e-76 289.3 220 65.5
Os07g0578600 Oryza sativa ssp. japonica HOM05D004983 ORTHO05D005847 6.9e-76 288.1 220 65.0
ATR0665G657 Amborella trichopoda HOM05D004983 ORTHO05D005847 9.0e-76 287.7 229 65.1
CiPaw.05G143400 Carya illinoinensis HOM05D004983 ORTHO05D005847 1.5e-75 287.0 233 61.8
Peaxi162Scf00017g02122 Petunia axillaris HOM05D004983 ORTHO05D005847 2.9e-74 282.7 220 65.5
Zm00001eb107660 Zea mays HOM05D004983 ORTHO05D005847 2.9e-74 282.7 222 65.3
Peaxi162Scf00496g00013 Petunia axillaris HOM05D004983 ORTHO05D005847 4.9e-74 282.0 213 69.0
FvH4_4g35410 Fragaria vesca HOM05D004983 ORTHO05D005847 1.1e-73 280.8 235 59.1
HPP92_026476 Vanilla planifolia HOM05D004983 ORTHO05D005847 1.4e-73 280.4 234 62.0
HPP92_014218 Vanilla planifolia HOM05D004983 ORTHO05D005847 4.2e-73 278.9 234 62.0
arahy.Tifrunner.gnm1.ann1.G2IRY3 Arachis hypogaea HOM05D004983 ORTHO05D005847 1.6e-72 276.9 240 60.0
FAN07G1154 Fragaria x ananassa HOM05D004983 ORTHO05D005847 3.0e-71 272.7 261 53.6
arahy.Tifrunner.gnm1.ann1.N4VW2L Arachis hypogaea HOM05D004983 ORTHO05D005847 1.1e-70 270.8 251 57.4
RcHm_v2.0_Chr4g0445021 Rosa chinensis HOM05D004983 ORTHO05D005847 1.1e-70 270.8 232 58.6
Psat5g181720 Pisum sativum HOM05D004983 ORTHO05D005847 3.3e-70 269.2 146 91.1
BcaNung01178 Brassica carinata HOM05D004983 ORTHO05D005847 4.8e-69 265.4 268 54.1
unitig_27.g25109 Utricularia gibba HOM05D000870 ORTHO05D005847 6.2e-69 265.0 201 66.2
Atru.chr11.1914 Acer truncatum HOM05D004983 ORTHO05D005847 1.4e-68 263.8 217 60.8
AUR62021779 Chenopodium quinoa HOM05D004983 ORTHO05D005847 1.8e-68 263.5 223 62.8
Sed0011699 Sechium edule HOM05D004983 ORTHO05D005847 2.5e-65 253.1 169 73.4
AagrBONN_evm.TU.Sc2ySwM_362.273 Anthoceros agrestis HOM05D004983 ORTHO05D005847 3.0e-63 246.1 215 59.1
FAN12G3769 Fragaria x ananassa HOM05D004983 ORTHO05D005847 6.7e-63 245.0 274 49.3
FAN22G0524 Fragaria x ananassa HOM05D004983 ORTHO05D005847 1.5e-62 243.8 235 53.2
Duzib251G0645 Durio zibethinus HOM05D004983 ORTHO05D005847 7.4e-62 241.5 181 64.1
Cpa.g.sc203.7 Carica papaya HOM05D004983 ORTHO05D005847 1.6e-61 240.4 233 54.5
SMO271G0141 Selaginella moellendorffii HOM05D004983 ORTHO05D005847 1.6e-61 240.4 224 56.7
Gohir.A10G180700 Gossypium hirsutum HOM05D004983 ORTHO05D005847 2.4e-60 236.5 145 80.0
Mapoly0019s0150 Marchantia polymorpha HOM05D004983 ORTHO05D005847 3.1e-60 236.1 227 52.4
MD16G1082800 Malus domestica HOM05D004983 ORTHO05D005847 4.5e-59 232.3 252 52.0
Nn4g24106 Nelumbo nucifera HOM05D004983 ORTHO05D005847 1.7e-58 230.3 244 54.1
CSS0025366 Camellia sinensis var. sinensis HOM05D004983 ORTHO05D005847 2.2e-58 229.9 157 72.6
Lj9A456T34 Lonicera japonica HOM05D004983 ORTHO05D005847 7.9e-56 221.5 141 77.3
Nitab4.5_0002376g0010 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.3e-54 216.1 269 46.8
SalBow5G1630 Salvia bowleyana HOM05D004983 ORTHO05D005847 3.3e-54 216.1 231 53.7
Dinv31146 Davidia involucrata HOM05D004983 ORTHO05D005847 4.1e-52 209.1 146 69.9
Nitab4.5_0000642g0190 Nicotiana tabacum HOM05D004983 ORTHO05D005847 3.8e-50 202.6 228 51.8
Atru.chr11.1910 Acer truncatum HOM05D004983 ORTHO05D005847 1.9e-49 200.3 146 66.4
CBR_g34194 Chara braunii HOM05D004983 ORTHO05D005847 1.1e-44 184.5 224 43.8
Nitab4.5_0000710g0080 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.7e-42 177.2 155 58.1
Nitab4.5_0009486g0020 Nicotiana tabacum HOM05D004983 ORTHO05D005847 1.4e-41 174.1 150 60.0
Pp3c12_22470 Physcomitrium patens HOM05D004983 ORTHO05D005847 1.2e-40 171.0 159 53.5
Pp3c3_32060 Physcomitrium patens HOM05D004983 ORTHO05D005847 1.6e-40 170.6 159 52.2
SEGI_36548 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 6.1e-40 168.7 136 62.5
Psat0s864g0040 Pisum sativum HOM05D004983 ORTHO05D005847 2.6e-35 153.3 89 86.5
Cre09.g403293 Chlamydomonas reinhardtii HOM05D004983 ORTHO05D005847 2.5e-33 146.7 207 41.5
Hma1.2p1_4120F.1_g338320 Hydrangea macrophylla HOM05D004983 ORTHO05D005847 7.2e-33 145.2 96 72.9
GSVIVG01020126001 Vitis vinifera HOM05D004983 ORTHO05D005847 8.0e-32 141.7 124 58.9
MCO01G728 Micromonas commoda HOM05D004983 ORTHO05D005847 6.3e-29 132.1 238 37.0
SEGI_02343 Sequoiadendron giganteum HOM05D004983 ORTHO05D005847 1.1e-28 131.3 96 67.7
ClCG06G016570 Citrullus lanatus HOM05D004983 ORTHO05D005847 1.3e-26 124.4 82 73.2
FAN17G3002 Fragaria x ananassa HOM05D004983 ORTHO05D005847 7.2e-25 118.6 117 52.1
PRCOL_00002663 Prasinoderma coloniale HOM05D004983 ORTHO05D005847 2.0e-22 110.5 235 33.2
Atru.chr11.1911 Acer truncatum HOM05D004983 ORTHO05D005847 1.7e-18 97.4 88 55.7
Nitab4.5_0000710g0100 Nicotiana tabacum HOM05D004983 ORTHO05D005847 5.4e-12 75.9 59 59.3
Ca_28882_v3 Cicer arietinum L. HOM05D004983 ORTHO05D005847 9.8e-06 55.1 204 25.0


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