Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3721 Trifolium pratense HOM05D009465 ORTHO05D012186 2.8e-242 841.6 467 100.0
Psat1g121040 Pisum sativum HOM05D009465 ORTHO05D012186 9.9e-171 604.0 417 79.4
Ca_25367_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 1.8e-156 556.6 420 72.4
Glyma.09G162300 Glycine max HOM05D009465 ORTHO05D012186 3.9e-143 512.3 432 66.4
Lj2g0000979 Lotus japonicus HOM05D009465 ORTHO05D012186 1.5e-142 510.4 424 68.9
Glyma.16G211600 Glycine max HOM05D009465 ORTHO05D012186 3.3e-142 509.2 432 66.2
VMungo0464G0894 Vigna mungo HOM05D000005 ORTHO05D012186 1.4e-140 503.8 432 65.0
arahy.Tifrunner.gnm1.ann1.HHM7P8 Arachis hypogaea HOM05D009465 ORTHO05D012186 4.5e-139 498.8 437 63.8
arahy.Tifrunner.gnm1.ann1.KQ9JXS Arachis hypogaea HOM05D009465 ORTHO05D012186 4.5e-139 498.8 491 58.9
Phvul.004G137500 Phaseolus vulgaris HOM05D009465 ORTHO05D012186 2.9e-138 496.1 429 66.0
Lalb_Chr22g0354041 Lupinus albus HOM05D009465 ORTHO05D012186 2.7e-136 489.6 418 66.0
Lalb_Chr14g0370161 Lupinus albus HOM05D009465 ORTHO05D012186 3.4e-131 472.6 410 64.4
Glyma.06G310000 Glycine max HOM05D000005 ORTHO05D000012 1.0e-66 258.5 333 46.5
Phvul.005G016500 Phaseolus vulgaris HOM05D000005 ORTHO05D012186 9.9e-62 241.9 315 47.6
Lj3g0008516 Lotus japonicus HOM05D000005 ORTHO05D000012 1.2e-56 224.9 326 43.6
arahy.Tifrunner.gnm1.ann1.5MQ2SU Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-55 221.9 240 52.1
Medtr3g012470 Medicago truncatula HOM05D000005 ORTHO05D000012 2.6e-54 217.2 242 52.1
arahy.Tifrunner.gnm1.ann1.S5VFF6 Arachis hypogaea HOM05D000005 ORTHO05D000012 2.2e-53 214.2 455 36.0
Psat3g161560 Pisum sativum HOM05D009465 ORTHO05D012186 3.3e-49 200.3 240 48.8
Ca_14232_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 8.1e-48 195.7 250 46.8
TPR.G9971 Trifolium pratense HOM05D009465 ORTHO05D012186 5.3e-47 193.0 243 49.0
arahy.Tifrunner.gnm1.ann1.71Y0FT Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-41 175.3 327 38.2
arahy.Tifrunner.gnm1.ann1.MNHF94 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-41 175.3 327 38.2
Lalb_Chr22g0354031 Lupinus albus HOM05D000005 ORTHO05D000012 1.6e-40 171.4 253 41.5
arahy.Tifrunner.gnm1.ann1.GK6QJJ Arachis hypogaea HOM05D001484 ORTHO05D001564 6.2e-40 169.5 321 37.1
arahy.Tifrunner.gnm1.ann1.RYL35A Arachis hypogaea HOM05D000005 ORTHO05D000012 1.4e-39 168.3 258 40.7
arahy.Tifrunner.gnm1.ann1.F56ZG1 Arachis hypogaea HOM05D000005 ORTHO05D000012 1.8e-39 167.9 275 40.0
Lj2g0012327 Lotus japonicus HOM05D000005 ORTHO05D000012 3.1e-39 167.2 248 39.9
Lj2g0014678 Lotus japonicus HOM05D000005 ORTHO05D000012 3.4e-38 163.7 244 42.2
TPR.G28367 Trifolium pratense HOM05D009465 ORTHO05D012186 1.3e-37 161.8 263 37.6
arahy.Tifrunner.gnm1.ann1.2C57RQ Arachis hypogaea HOM05D000005 ORTHO05D000012 2.2e-37 161.0 262 42.7
Ca_25368_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 2.4e-36 157.5 277 40.1
Ca_25369_v3 Cicer arietinum L. HOM05D009465 ORTHO05D012186 4.2e-36 156.8 318 35.2
Psat1g120400 Pisum sativum HOM05D000005 ORTHO05D012186 7.9e-35 152.5 242 38.4
arahy.Tifrunner.gnm1.ann1.WVJ4GZ Arachis hypogaea HOM05D000005 ORTHO05D000012 1.0e-34 152.1 254 37.8
arahy.Tifrunner.gnm1.ann1.NC3JHS Arachis hypogaea HOM05D000001 ORTHO05D000003 2.3e-34 151.0 185 47.0
arahy.Tifrunner.gnm1.ann1.0HIU69 Arachis hypogaea HOM05D009465 ORTHO05D012186 6.7e-34 149.4 185 46.5
arahy.Tifrunner.gnm1.ann1.ID9NSH Arachis hypogaea HOM05D000005 ORTHO05D000012 7.4e-33 146.0 248 39.1
arahy.Tifrunner.gnm1.ann1.HVB0T8 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.7e-32 143.7 223 42.6
arahy.Tifrunner.gnm1.ann1.KU4K90 Arachis hypogaea HOM05D000005 ORTHO05D000012 6.2e-32 142.9 254 36.6
TPR.G3228 Trifolium pratense HOM05D009465 ORTHO05D012186 6.2e-32 142.9 173 47.4
arahy.Tifrunner.gnm1.ann1.C97LW1 Arachis hypogaea HOM05D000001 ORTHO05D000003 3.1e-31 140.6 196 43.4
arahy.Tifrunner.gnm1.ann1.XFY5VA Arachis hypogaea HOM05D000001 ORTHO05D000003 9.0e-31 139.0 166 47.6
arahy.Tifrunner.gnm1.ann1.H8JIAA Arachis hypogaea HOM05D000005 ORTHO05D000012 3.8e-29 133.7 251 40.2
arahy.Tifrunner.gnm1.ann1.BXGY4D Arachis hypogaea HOM05D009465 ORTHO05D017464 1.4e-28 131.7 238 35.7
arahy.Tifrunner.gnm1.ann1.N3L79K Arachis hypogaea HOM05D009465 ORTHO05D017464 1.3e-26 125.2 240 34.2
arahy.Tifrunner.gnm1.ann1.1EPI1N Arachis hypogaea HOM05D000005 ORTHO05D000012 6.3e-24 116.3 295 33.9
arahy.Tifrunner.gnm1.ann1.ET89BN Arachis hypogaea HOM05D000005 ORTHO05D000012 1.1e-23 115.5 292 33.9
Psat0s1832g0040 Pisum sativum HOM05D009465 ORTHO05D017464 1.1e-23 115.5 241 32.8
Psat1g120040 Pisum sativum HOM05D009465 ORTHO05D017464 1.1e-23 115.5 241 32.8
Medtr6g078420 Medicago truncatula HOM05D000005 ORTHO05D000012 1.2e-22 112.1 198 35.4
arahy.Tifrunner.gnm1.ann1.68FRR6 Arachis hypogaea HOM05D000005 ORTHO05D000012 3.4e-22 110.5 236 36.9
TPR.G19269 Trifolium pratense HOM05D009465 ORTHO05D017464 4.5e-22 110.2 260 31.9
arahy.Tifrunner.gnm1.ann1.8EI7FZ Arachis hypogaea HOM05D000007 ORTHO05D000039 8.4e-21 105.9 185 38.9
arahy.Tifrunner.gnm1.ann1.EW42QP Arachis hypogaea HOM05D000005 ORTHO05D000012 1.4e-10 72.0 140 40.0
VMungo0464G1659 Vigna mungo HOM05D009465 ORTHO05D012186 7.4e-09 66.2 85 44.7
VMungo0464G1615 Vigna mungo HOM05D009465 ORTHO05D017464 1.7e-08 65.1 158 34.8
arahy.Tifrunner.gnm1.ann1.YKF62D Arachis hypogaea HOM05D009465 ORTHO05D012186 2.8e-08 64.3 125 39.2
Ca_25370_v3 Cicer arietinum L. HOM05D009465 ORTHO05D017464 3.7e-08 63.9 132 35.6
Nn4g24733 Nelumbo nucifera HOM05D000030 ORTHO05D000009 3.1e-07 60.8 66 47.0
COL.COLO4_16743 Corchorus olitorius HOM05D000030 ORTHO05D034864 5.3e-07 60.1 82 42.7
COL.COLO4_37070 Corchorus olitorius HOM05D000030 ORTHO05D000009 1.5e-06 58.5 78 38.5
Gohir.A02G007050 Gossypium hirsutum HOM05D000030 ORTHO05D000009 4.5e-06 57.0 78 39.7
Gohir.D02G006650 Gossypium hirsutum HOM05D000030 ORTHO05D000009 4.5e-06 57.0 78 39.7
Gorai.005G007800 Gossypium raimondii HOM05D000030 ORTHO05D000009 4.5e-06 57.0 78 39.7
Nn5g27667 Nelumbo nucifera HOM05D000030 ORTHO05D000009 4.5e-06 57.0 65 44.6
Duzib151G0841 Durio zibethinus HOM05D000030 ORTHO05D000009 7.7e-06 56.2 82 40.2


User provided reference genes

Program Settings