Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37180 Trifolium pratense HOM05D002758 ORTHO05D002885 8.0e-68 260.4 139 100.0
Psat5g302120 Pisum sativum HOM05D002758 ORTHO05D002885 3.7e-33 145.2 142 62.0
Glyma.08G211800 Glycine max HOM05D002758 ORTHO05D002885 8.9e-27 124.0 143 56.6
Medtr2g103750 Medicago truncatula HOM05D002758 ORTHO05D002885 1.4e-24 116.7 135 52.6
Glyma.07G031000 Glycine max HOM05D002758 ORTHO05D002885 1.2e-23 113.6 143 53.8
Phvul.010G155100 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 2.5e-21 105.9 142 51.4
Medtr4g010530 Medicago truncatula HOM05D002758 ORTHO05D002885 9.6e-21 104.0 140 50.7
VMungo1080G1568 Vigna mungo HOM05D002758 ORTHO05D002885 3.4e-18 95.5 140 49.3
TPR.G38648 Trifolium pratense HOM05D002758 ORTHO05D002885 4.4e-18 95.1 143 49.0
VMungo0331G0585 Vigna mungo HOM05D002758 ORTHO05D002885 5.8e-18 94.7 140 48.6
Glyma.13G365000 Glycine max HOM05D002758 ORTHO05D002885 8.4e-17 90.9 139 48.2
Psat7g255440 Pisum sativum HOM05D002758 ORTHO05D002885 4.2e-16 88.6 144 45.8
CiPaw.01G246400 Carya illinoinensis HOM05D002758 ORTHO05D002885 1.6e-15 86.7 139 43.9
Lalb_Chr10g0096781 Lupinus albus HOM05D002758 ORTHO05D002885 1.3e-14 83.6 141 46.8
Phvul.005G177400 Phaseolus vulgaris HOM05D002758 ORTHO05D002885 6.6e-14 81.3 140 43.6
Dinv30594 Davidia involucrata HOM05D002758 ORTHO05D002885 8.7e-14 80.9 135 43.7
Lj3g0013801 Lotus japonicus HOM05D002758 ORTHO05D002885 1.1e-13 80.5 136 44.9
Manes.04G113800 Manihot esculenta HOM05D002758 ORTHO05D002885 3.3e-13 79.0 149 40.9
arahy.Tifrunner.gnm1.ann1.3WRP69 Arachis hypogaea HOM05D002758 ORTHO05D002885 9.6e-13 77.4 139 47.5
arahy.Tifrunner.gnm1.ann1.A8WRUN Arachis hypogaea HOM05D002758 ORTHO05D002885 9.6e-13 77.4 139 47.5
Atru.chr1.2990 Acer truncatum HOM05D002758 ORTHO05D002885 3.6e-12 75.5 139 40.3
Lalb_Chr01g0012401 Lupinus albus HOM05D002758 ORTHO05D002885 4.8e-12 75.1 138 40.6
Ciclev10026775m.g Citrus clementina HOM05D002758 ORTHO05D002885 3.1e-11 72.4 132 44.7
arahy.Tifrunner.gnm1.ann1.R8JN66 Arachis hypogaea HOM05D002758 ORTHO05D002885 5.3e-11 71.6 142 40.8
arahy.Tifrunner.gnm1.ann1.66WDLV Arachis hypogaea HOM05D002758 ORTHO05D002885 9.0e-11 70.9 141 39.7
Glyma.15G008300 Glycine max HOM05D002758 ORTHO05D002885 9.0e-11 70.9 139 43.2
GSVIVG01017318001 Vitis vinifera HOM05D002758 ORTHO05D002885 9.0e-11 70.9 132 42.4
Duzib235G1225 Durio zibethinus HOM05D002758 ORTHO05D002885 1.5e-10 70.1 139 40.3
CiPaw.02G156300 Carya illinoinensis HOM05D002758 ORTHO05D002885 2.6e-10 69.3 139 38.1
CSS0041896 Camellia sinensis var. sinensis HOM05D002758 ORTHO05D002885 3.4e-10 68.9 132 38.6
Lalb_Chr25g0279401 Lupinus albus HOM05D002758 ORTHO05D002885 9.9e-10 67.4 139 39.6
TWI18G1221 Tripterygium wilfordii HOM05D002758 ORTHO05D002885 1.3e-09 67.0 139 37.4
Thecc.06G021700 Theobroma cacao HOM05D002758 ORTHO05D002885 1.7e-09 66.6 139 40.3
MD17G1209300 Malus domestica HOM05D002758 ORTHO05D002885 2.9e-09 65.9 140 40.0
Nn8g39466 Nelumbo nucifera HOM05D002758 ORTHO05D002885 3.8e-09 65.5 133 40.6
arahy.Tifrunner.gnm1.ann1.FSE12S Arachis hypogaea HOM05D002758 ORTHO05D002885 6.4e-09 64.7 139 41.7
Lalb_Chr13g0301821 Lupinus albus HOM05D002758 ORTHO05D002885 8.4e-09 64.3 131 40.5
Manes.11G055700 Manihot esculenta HOM05D002758 ORTHO05D002885 8.4e-09 64.3 136 39.7
Prupe.3G084900 Prunus persica HOM05D002758 ORTHO05D002885 8.4e-09 64.3 137 43.1
FAN05G1526 Fragaria x ananassa HOM05D002758 ORTHO05D002885 1.4e-08 63.5 130 39.2
QL05p029455 Quercus lobata HOM05D002758 ORTHO05D002885 1.4e-08 63.5 138 39.1
Lj3g0008770 Lotus japonicus HOM05D002758 ORTHO05D002885 1.9e-08 63.2 160 37.5
CANSAT56G1388 Cannabis sativa HOM05D002758 ORTHO05D002885 3.2e-08 62.4 141 37.6
COL.COLO4_12950 Corchorus olitorius HOM05D002758 ORTHO05D002885 3.2e-08 62.4 148 38.5
Potri.001G192800 Populus trichocarpa HOM05D002758 ORTHO05D002885 3.2e-08 62.4 133 33.1
BcaC08g43429 Brassica carinata HOM05D002758 ORTHO05D002885 4.2e-08 62.0 146 37.7
Thhalv10021746m.g Eutrema salsugineum HOM05D002758 ORTHO05D002885 4.2e-08 62.0 145 37.2
FAN02G3379 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.2e-08 62.0 130 39.2
FAN14G2484 Fragaria x ananassa HOM05D002758 ORTHO05D002885 4.2e-08 62.0 130 39.2
Oeu027807.1 Olea europaea HOM05D002758 ORTHO05D002885 4.2e-08 62.0 137 37.2
arahy.Tifrunner.gnm1.ann1.75SBZZ Arachis hypogaea HOM05D002758 ORTHO05D002885 5.4e-08 61.6 134 35.8
Gohir.A10G074300 Gossypium hirsutum HOM05D002758 ORTHO05D002885 5.4e-08 61.6 134 41.0
TAR383G0328 Trochodendron aralioides HOM05D002758 ORTHO05D002885 5.4e-08 61.6 121 42.1
BolC6t35882H Brassica oleracea HOM05D002758 ORTHO05D002885 9.3e-08 60.8 142 37.3
Lalb_Chr07g0178991 Lupinus albus HOM05D002758 ORTHO05D002885 1.2e-07 60.5 128 39.1
PSO210G1692 Papaver somniferum HOM05D002758 ORTHO05D002885 1.2e-07 60.5 142 36.6
FvH4_6g29910 Fragaria vesca HOM05D002758 ORTHO05D002885 1.6e-07 60.1 130 38.5
RcHm_v2.0_Chr2g0135861 Rosa chinensis HOM05D002758 ORTHO05D002885 1.6e-07 60.1 130 39.2
Aqoxy7G03691 Aquilegia oxysepala HOM05D002758 ORTHO05D002885 2.1e-07 59.7 131 40.5
Gohir.A05G125833 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.1e-07 59.7 143 39.2
Gohir.A05G125900 Gossypium hirsutum HOM05D002758 ORTHO05D002885 2.1e-07 59.7 143 39.2
Gorai.009G130900 Gossypium raimondii HOM05D002758 ORTHO05D002885 2.1e-07 59.7 138 39.9
Nn2g12045 Nelumbo nucifera HOM05D002758 ORTHO05D002885 2.1e-07 59.7 131 38.2
PGR031G0668 Punica granatum HOM05D002758 ORTHO05D002885 2.1e-07 59.7 135 39.3
vmacro18989 Vaccinium macrocarpon HOM05D002758 ORTHO05D002885 2.7e-07 59.3 140 37.9
Carub.0003s1550 Capsella rubella HOM05D002758 ORTHO05D002885 3.5e-07 58.9 146 37.0
Cpa.g.sc10.256 Carica papaya HOM05D002758 ORTHO05D002885 3.5e-07 58.9 138 37.0
AL1G60820 Arabidopsis lyrata HOM05D002758 ORTHO05D002885 4.6e-07 58.5 145 37.2
BcaC08g44003 Brassica carinata HOM05D002758 ORTHO05D002885 4.6e-07 58.5 149 36.2
Gohir.D10G077100 Gossypium hirsutum HOM05D002758 ORTHO05D002885 4.6e-07 58.5 137 38.0
TAR626G0616 Trochodendron aralioides HOM05D002758 ORTHO05D002885 4.6e-07 58.5 129 39.5
Gohir.D05G126800 Gossypium hirsutum HOM05D002758 ORTHO05D002885 6.0e-07 58.2 143 38.5
Gorai.011G083300 Gossypium raimondii HOM05D002758 ORTHO05D002885 6.0e-07 58.2 137 38.0
BcaB04g20905 Brassica carinata HOM05D002758 ORTHO05D002885 7.9e-07 57.8 143 37.8
TPR.G26478 Trifolium pratense HOM05D002758 ORTHO05D002885 7.9e-07 57.8 151 35.8
PSO210G4958 Papaver somniferum HOM05D002758 ORTHO05D002885 1.0e-06 57.4 137 35.8
THA.LOC104815531 Tarenaya hassleriana HOM05D002758 ORTHO05D002885 1.0e-06 57.4 140 39.3
Duzib160G0702 Durio zibethinus HOM05D002758 ORTHO05D002885 1.3e-06 57.0 143 37.8
Hma1.2p1_1962F.1_g309250 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 1.3e-06 57.0 132 37.1
arahy.Tifrunner.gnm1.ann1.4I3R3X Arachis hypogaea HOM05D002758 ORTHO05D002885 2.3e-06 56.2 134 33.6
AL3G28420 Arabidopsis lyrata HOM05D002758 ORTHO05D002885 3.0e-06 55.8 146 35.6
BcaC05g28933 Brassica carinata HOM05D002758 ORTHO05D002885 3.0e-06 55.8 144 37.5
Actinidia15774 Actinidia chinensis HOM05D002758 ORTHO05D002885 3.9e-06 55.5 135 38.5
A05p18910 Brassica napus HOM05D002758 ORTHO05D002885 3.9e-06 55.5 149 35.6
Duzib187G0530 Durio zibethinus HOM05D002758 ORTHO05D002885 3.9e-06 55.5 135 40.0
BcaC08g43430 Brassica carinata HOM05D002758 ORTHO05D002885 5.1e-06 55.1 136 36.0
BcaC09g48555 Brassica carinata HOM05D002758 ORTHO05D002885 5.1e-06 55.1 145 36.6
C01p48670 Brassica napus HOM05D002758 ORTHO05D002885 5.1e-06 55.1 145 36.6
BolC1t04821H Brassica oleracea HOM05D002758 ORTHO05D002885 5.1e-06 55.1 145 36.6
Ca_21675_v3 Cicer arietinum L. HOM05D002758 ORTHO05D002885 5.1e-06 55.1 151 38.4
Hund09249 Selenicereus undatus HOM05D002758 ORTHO05D002885 5.1e-06 55.1 156 34.0
Actinidia01753 Actinidia chinensis HOM05D002758 ORTHO05D002885 6.6e-06 54.7 131 36.6
Hma1.2p1_0018F.1_g012340 Hydrangea macrophylla HOM05D002758 ORTHO05D002885 6.6e-06 54.7 127 41.7
Medtr4g114600 Medicago truncatula HOM05D002758 ORTHO05D002885 6.6e-06 54.7 146 37.0
Psat4g039800 Pisum sativum HOM05D002758 ORTHO05D002885 6.6e-06 54.7 132 37.9
Thecc.09G127400 Theobroma cacao HOM05D002758 ORTHO05D002885 6.6e-06 54.7 140 35.7
AT3G15760 Arabidopsis thaliana HOM05D002758 ORTHO05D002885 8.7e-06 54.3 142 35.2
Duzib150G0461 Durio zibethinus HOM05D002758 ORTHO05D002885 8.7e-06 54.3 130 37.7


User provided reference genes

Program Settings