Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37110 Trifolium pratense HOM05D004659 ORTHO05D005547 1.5e-93 346.3 186 100.0
Medtr4g131540 Medicago truncatula HOM05D004659 ORTHO05D005547 1.1e-80 303.5 233 70.8
Ca_21106_v3 Cicer arietinum L. HOM05D004659 ORTHO05D005547 2.1e-76 289.3 234 66.2
Psat4g007600 Pisum sativum HOM05D004659 ORTHO05D005547 5.8e-74 281.2 236 65.3
arahy.Tifrunner.gnm1.ann1.23T474 Arachis hypogaea HOM05D004659 ORTHO05D005547 7.9e-63 244.2 234 57.7
Lj4g0017760 Lotus japonicus HOM05D004659 ORTHO05D005547 1.4e-62 243.4 224 58.5
VMungo0464G0639 Vigna mungo HOM05D004659 ORTHO05D005547 1.5e-61 240.0 229 57.2
Phvul.004G002100 Phaseolus vulgaris HOM05D004659 ORTHO05D005547 2.0e-61 239.6 226 57.5
Lalb_Chr07g0179691 Lupinus albus HOM05D004659 ORTHO05D005547 3.1e-59 232.3 232 56.0
Peaxi162Scf00195g00083 Petunia axillaris HOM05D004659 ORTHO05D005547 1.0e-57 227.3 136 79.4
CSS0038055 Camellia sinensis var. sinensis HOM05D004659 ORTHO05D005547 1.4e-56 223.4 130 80.0
CAN.G186.30 Capsicum annuum HOM05D004659 ORTHO05D005547 3.2e-56 222.2 135 77.8
Nitab4.5_0000691g0220 Nicotiana tabacum HOM05D004659 ORTHO05D005547 3.2e-56 222.2 130 81.5
PGSC0003DMG400032570 Solanum tuberosum HOM05D004659 ORTHO05D005547 7.2e-56 221.1 135 77.8
Glyma.17G075900 Glycine max HOM05D004659 ORTHO05D005547 9.4e-56 220.7 228 54.8
SalBow4G3080 Salvia bowleyana HOM05D004659 ORTHO05D005547 9.4e-56 220.7 134 76.9
CiPaw.02G177400 Carya illinoinensis HOM05D004659 ORTHO05D005547 1.2e-55 220.3 134 77.6
AUR62036014 Chenopodium quinoa HOM05D004659 ORTHO05D005547 1.2e-55 220.3 133 78.2
Nitab4.5_0004104g0080 Nicotiana tabacum HOM05D004659 ORTHO05D005547 1.6e-55 219.9 130 80.0
Solyc04g009540.1 Solanum lycopersicum HOM05D004659 ORTHO05D005547 1.6e-55 219.9 135 77.0
Sopen04g004700 Solanum pennellii HOM05D004659 ORTHO05D005547 1.6e-55 219.9 135 77.0
AUR62027894 Chenopodium quinoa HOM05D004659 ORTHO05D005547 2.7e-55 219.2 133 77.4
Rhsim03G0135900 Rhododendron simsii HOM05D004659 ORTHO05D005547 2.7e-55 219.2 134 75.4
Hma1.2p1_2685F.1_g326920 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 3.6e-55 218.8 134 74.6
vmacro04881 Vaccinium macrocarpon HOM05D004659 ORTHO05D005547 7.9e-55 217.6 131 77.9
Atru.chr12.612 Acer truncatum HOM05D004659 ORTHO05D005547 5.1e-54 214.9 131 74.8
CARHR199930 Cardamine hirsuta HOM05D004659 ORTHO05D005547 8.8e-54 214.2 130 76.2
THA.LOC104799364 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 1.5e-53 213.4 131 74.0
Oeu017240.1 Olea europaea HOM05D004659 ORTHO05D005547 2.0e-53 213.0 131 75.6
THA.LOC104827313 Tarenaya hassleriana HOM05D004659 ORTHO05D005547 2.0e-53 213.0 131 74.8
Gohir.D05G298600 Gossypium hirsutum HOM05D004659 ORTHO05D005547 7.4e-53 211.1 135 73.3
Gorai.009G315800 Gossypium raimondii HOM05D004659 ORTHO05D005547 7.4e-53 211.1 135 73.3
Gohir.A05G298900 Gossypium hirsutum HOM05D004659 ORTHO05D005547 1.7e-52 209.9 135 72.6
AL6G24130 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 2.2e-52 209.5 130 73.8
AT5G13510 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 2.2e-52 209.5 130 74.6
PGR031G1734 Punica granatum HOM05D004659 ORTHO05D005547 2.8e-52 209.1 234 51.7
MSTRG.9197 Avicennia marina HOM05D004659 ORTHO05D005547 3.7e-52 208.8 134 73.9
Potri.010G215900 Populus trichocarpa HOM05D004659 ORTHO05D005547 4.8e-52 208.4 134 71.6
SGA_v2.0_scaffold62G21448 Striga asiatica HOM05D004659 ORTHO05D005547 4.8e-52 208.4 134 72.4
Aa31sc127G30 Aethionema arabicum HOM05D004659 ORTHO05D005547 8.2e-52 207.6 130 72.3
Sc09g0006840 Simmondsia chinensis HOM05D004659 ORTHO05D005547 8.2e-52 207.6 132 74.2
Sabra10G0166900 Salix brachista HOM05D004659 ORTHO05D005547 2.4e-51 206.1 134 70.9
Lalb_Chr13g0301081 Lupinus albus HOM05D004659 ORTHO05D005547 4.1e-51 205.3 225 54.2
Lj1P926T21 Lonicera japonica HOM05D004659 ORTHO05D005547 7.0e-51 204.5 130 70.8
ClCG02G013790 Citrullus lanatus HOM05D004659 ORTHO05D005547 1.2e-50 203.8 135 69.6
Ah.10g033100 Amaranthus hybridus HOM05D004659 ORTHO05D005547 3.5e-50 202.2 133 72.2
Potri.008G045800 Populus trichocarpa HOM05D004659 ORTHO05D005547 4.5e-50 201.8 134 68.7
Sabra08G0032100 Salix brachista HOM05D004659 ORTHO05D005547 7.7e-50 201.1 134 67.9
Cpa.g.sc1.279 Carica papaya HOM05D004659 ORTHO05D005547 1.0e-49 200.7 133 70.7
TWI38G0010 Tripterygium wilfordii HOM05D004659 ORTHO05D005547 1.0e-49 200.7 132 71.2
Actinidia03015 Actinidia chinensis HOM05D004659 ORTHO05D005547 1.3e-49 200.3 122 74.6
MELO3C011720.2 Cucumis melo HOM05D004659 ORTHO05D005547 1.3e-49 200.3 134 69.4
Sed0009994 Sechium edule HOM05D004659 ORTHO05D005547 1.3e-49 200.3 131 71.0
Aqoxy4G03156 Aquilegia oxysepala HOM05D004659 ORTHO05D005547 2.2e-49 199.5 134 70.1
CsaV3_5G006380 Cucumis sativus L. HOM05D004659 ORTHO05D005547 2.9e-49 199.1 134 68.7
Cfa013817 Carpinus fangiana HOM05D004659 ORTHO05D005547 3.8e-49 198.7 134 70.1
BcaC04g19111 Brassica carinata HOM05D004659 ORTHO05D005547 5.0e-49 198.4 134 67.2
BolC9t59202H Brassica oleracea HOM05D004659 ORTHO05D005547 5.0e-49 198.4 134 67.2
Manes.07G069200 Manihot esculenta HOM05D004659 ORTHO05D005547 3.2e-48 195.7 134 66.4
Carub.0006s1167 Capsella rubella HOM05D004659 ORTHO05D005547 4.2e-48 195.3 130 70.8
MD10G1183400 Malus domestica HOM05D004659 ORTHO05D005547 4.2e-48 195.3 134 67.9
PSO339G6228 Papaver somniferum HOM05D004659 ORTHO05D005547 4.2e-48 195.3 132 70.5
PSO384G3929 Papaver somniferum HOM05D004659 ORTHO05D005547 4.2e-48 195.3 132 70.5
BolC2t06562H Brassica oleracea HOM05D004659 ORTHO05D005547 7.2e-48 194.5 134 67.9
MD05G1196100 Malus domestica HOM05D004659 ORTHO05D005547 7.2e-48 194.5 134 67.9
unitig_46.g18586 Utricularia gibba HOM05D004659 ORTHO05D005547 7.2e-48 194.5 135 65.9
BraA02t05172Z Brassica rapa HOM05D004659 ORTHO05D005547 1.2e-47 193.7 135 66.7
CANSAT35G1484 Cannabis sativa HOM05D004659 ORTHO05D005547 1.2e-47 193.7 134 67.2
Haze_22491 Corylus avellana HOM05D004659 ORTHO05D005547 1.2e-47 193.7 134 68.7
BcaNung01889 Brassica carinata HOM05D004659 ORTHO05D005547 2.1e-47 193.0 134 67.2
A10p24760 Brassica napus HOM05D004659 ORTHO05D005547 2.1e-47 193.0 134 67.2
C02p06210 Brassica napus HOM05D004659 ORTHO05D005547 2.1e-47 193.0 134 67.2
C09p63590 Brassica napus HOM05D004659 ORTHO05D005547 2.1e-47 193.0 134 67.2
BraA10t44539Z Brassica rapa HOM05D004659 ORTHO05D005547 2.1e-47 193.0 134 67.2
Sp6g30510 Schrenkiella parvula HOM05D004659 ORTHO05D005547 4.7e-47 191.8 130 69.2
Prupe.8G222500 Prunus persica HOM05D004659 ORTHO05D005547 8.0e-47 191.0 134 66.4
Thhalv10014625m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 1.0e-46 190.7 130 70.0
QL08p057255 Quercus lobata HOM05D004659 ORTHO05D005547 1.0e-46 190.7 134 66.4
BcaNung01147 Brassica carinata HOM05D004659 ORTHO05D005547 1.8e-46 189.9 134 66.4
Duzib106G0066 Durio zibethinus HOM05D004659 ORTHO05D005547 2.0e-45 186.4 134 67.2
MBI05_g34749_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 2.0e-45 186.4 135 65.2
Mapoly0115s0051 Marchantia polymorpha HOM05D004659 ORTHO05D005547 2.6e-45 186.0 137 65.7
TAR369G1054 Trochodendron aralioides HOM05D004659 ORTHO05D005547 3.3e-45 185.7 130 68.5
Cc09_g02380 Coffea canephora HOM05D004659 ORTHO05D005547 4.4e-45 185.3 131 66.4
Lsat_1_v5_gn_9_66541 Lactuca sativa HOM05D004659 ORTHO05D005547 5.7e-45 184.9 130 66.2
SMO239G0117 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 2.2e-44 183.0 135 64.4
Nn2g10610 Nelumbo nucifera HOM05D004659 ORTHO05D005547 2.8e-44 182.6 129 66.7
Thecc.10G065300 Theobroma cacao HOM05D004659 ORTHO05D005547 4.8e-44 181.8 133 66.9
Ciclev10032705m.g Citrus clementina HOM05D004659 ORTHO05D005547 1.4e-43 180.3 131 64.9
ECA232G1287 Erigeron canadensis HOM05D004659 ORTHO05D005547 1.4e-43 180.3 135 62.2
Nn8g38769 Nelumbo nucifera HOM05D004659 ORTHO05D005547 1.4e-43 180.3 130 66.2
RcHm_v2.0_Chr6g0287931 Rosa chinensis HOM05D004659 ORTHO05D005547 1.4e-43 180.3 129 67.4
HanXRQChr09g0247171 Helianthus annuus HOM05D004659 ORTHO05D005547 1.8e-43 179.9 130 65.4
CDE09G1094 Ceratophyllum demersum HOM05D004659 ORTHO05D005547 4.1e-43 178.7 129 65.9
CDE02G4355 Ceratophyllum demersum HOM05D002697 ORTHO05D005547 7.0e-43 177.9 129 65.1
DCAR_019149 Daucus carota HOM05D004659 ORTHO05D005547 1.2e-42 177.2 134 63.4
FvH4_2g21340 Fragaria vesca HOM05D004659 ORTHO05D005547 2.0e-42 176.4 130 66.2
FAN24G1009 Fragaria x ananassa HOM05D004659 ORTHO05D005547 2.0e-42 176.4 130 66.2
Os03g0284400 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 4.5e-42 175.3 137 62.8
COL.COLO4_23776 Corchorus olitorius HOM05D004659 ORTHO05D005547 1.7e-41 173.3 134 62.7
Pp3c2_35950 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.7e-41 173.3 131 61.1
Zm00001eb397230 Zea mays HOM05D004659 ORTHO05D005547 3.8e-41 172.2 137 61.3
Zm00001eb013020 Zea mays HOM05D004659 ORTHO05D005547 8.5e-41 171.0 136 61.8
AagrBONN_evm.TU.Sc2ySwM_228.2422 Anthoceros agrestis HOM05D004659 ORTHO05D005547 1.1e-40 170.6 136 59.6
ATR0594G228 Amborella trichopoda HOM05D004659 ORTHO05D005547 1.9e-40 169.9 131 58.8
Pp3c1_1330 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.2e-39 167.2 131 59.5
SMO001G0016 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 1.2e-39 167.2 113 69.0
Glyma.13G155300 Glycine max HOM05D004659 ORTHO05D005547 7.5e-37 157.9 104 75.0
Thhalv10022434m.g Eutrema salsugineum HOM05D004659 ORTHO05D005547 1.4e-35 153.7 115 60.0
AT3G12370 Arabidopsis thaliana HOM05D004659 ORTHO05D005547 1.8e-35 153.3 114 61.4
C01p52890 Brassica napus HOM05D004659 ORTHO05D005547 2.4e-35 152.9 115 60.0
BolC1t05226H Brassica oleracea HOM05D004659 ORTHO05D005547 2.4e-35 152.9 115 60.0
AL3G24020 Arabidopsis lyrata HOM05D004659 ORTHO05D005547 3.1e-35 152.5 114 60.5
Sp3g10560 Schrenkiella parvula HOM05D004659 ORTHO05D005547 9.1e-35 151.0 114 58.8
BcaC09g48234 Brassica carinata HOM05D004659 ORTHO05D005547 2.0e-34 149.8 115 59.1
BcaC05g29267 Brassica carinata HOM05D004659 ORTHO05D005547 2.7e-34 149.4 115 58.3
C05p55460 Brassica napus HOM05D004659 ORTHO05D005547 2.7e-34 149.4 115 58.3
BolC5t34212H Brassica oleracea HOM05D004659 ORTHO05D005547 2.7e-34 149.4 115 58.3
Carub.0003s1173 Capsella rubella HOM05D004659 ORTHO05D005547 2.7e-34 149.4 114 59.6
A05p37030 Brassica napus HOM05D004659 ORTHO05D005547 3.5e-34 149.1 115 58.3
BraA05t22500Z Brassica rapa HOM05D004659 ORTHO05D005547 3.5e-34 149.1 115 58.3
CARHR086910 Cardamine hirsuta HOM05D004659 ORTHO05D005547 3.5e-34 149.1 114 59.6
Aa31sc153G80 Aethionema arabicum HOM05D004659 ORTHO05D005547 4.5e-34 148.7 118 58.5
A02p02000 Brassica napus HOM05D004659 ORTHO05D005547 1.7e-33 146.7 107 64.5
Zm00001eb355270 Zea mays HOM05D004659 ORTHO05D005547 8.0e-31 137.9 108 56.5
SMO306G0014 Selaginella moellendorffii HOM05D004659 ORTHO05D005547 4.4e-29 132.1 87 71.3
Os05g0121500 Oryza sativa ssp. japonica HOM05D004659 ORTHO05D005547 5.7e-29 131.7 111 52.3
Dinv31375 Davidia involucrata HOM05D004659 ORTHO05D005547 3.7e-28 129.0 73 79.5
BcaB01g05353 Brassica carinata HOM05D004659 ORTHO05D005547 2.4e-27 126.3 130 52.3
CBR_g32465 Chara braunii HOM05D004659 ORTHO05D005547 1.2e-26 124.0 135 45.9
HPP92_012064 Vanilla planifolia HOM05D004659 ORTHO05D005547 2.7e-26 122.9 112 50.9
Haze_16952 Corylus avellana HOM05D004659 ORTHO05D005547 7.7e-26 121.3 121 52.9
MD17G1117700 Malus domestica HOM05D004659 ORTHO05D005547 5.0e-25 118.6 86 66.3
Hund23274 Selenicereus undatus HOM05D004659 ORTHO05D005547 5.7e-21 105.1 108 50.0
Sc01g0005590 Simmondsia chinensis HOM05D004659 ORTHO05D005547 9.8e-21 104.4 108 50.9
MBI05_g35481_MAGBIO Magnolia biondii HOM05D004659 ORTHO05D005547 1.7e-20 103.6 103 52.4
Cfa001576 Carpinus fangiana HOM05D004659 ORTHO05D005547 4.9e-20 102.1 84 59.5
Sc01g0009170 Simmondsia chinensis HOM05D004659 ORTHO05D005547 1.6e-18 97.1 129 42.6
Zm00001eb342870 Zea mays HOM05D004659 ORTHO05D005547 1.6e-18 97.1 70 61.4
Sc26g0002120 Simmondsia chinensis HOM05D004659 ORTHO05D005547 5.9e-18 95.1 129 41.9
Pp3c11_2850 Physcomitrium patens HOM05D004659 ORTHO05D005547 1.0e-17 94.4 68 67.6
Ah.09g233850 Amaranthus hybridus HOM05D004659 ORTHO05D005547 1.6e-15 87.0 150 37.3
PRCOL_00005567 Prasinoderma coloniale HOM05D004659 ORTHO05D005547 8.0e-15 84.7 101 38.6
EL10Ac6g15306 Beta vulgaris HOM05D004659 ORTHO05D005547 5.2e-14 82.0 108 41.7
AUR62043493 Chenopodium quinoa HOM05D004659 ORTHO05D005547 3.4e-13 79.3 104 41.3
Cre06.g272850 Chlamydomonas reinhardtii HOM05D004659 ORTHO05D005547 1.2e-10 70.9 136 32.4
AUR62017877 Chenopodium quinoa HOM05D004659 ORTHO05D005547 6.2e-07 58.5 84 38.1
AUR62003563 Chenopodium quinoa HOM05D004659 ORTHO05D005547 8.0e-07 58.2 119 31.9
Hma1.2p1_1893F.1_g306730 Hydrangea macrophylla HOM05D004659 ORTHO05D005547 5.2e-06 55.5 59 44.1


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