Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3711 Trifolium pratense HOM05D001538 ORTHO05D000007 6.9e-107 390.6 188 100.0
TPR.G38577 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-15 86.3 91 45.1
TPR.G24447 Trifolium pratense HOM05D000003 ORTHO05D000006 3.1e-14 82.8 97 43.3
TPR.G36504 Trifolium pratense HOM05D000250 ORTHO05D000007 4.0e-14 82.4 78 46.2
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 2.0e-13 80.1 72 51.4
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-13 79.3 78 44.9
TPR.G32955 Trifolium pratense HOM05D001538 ORTHO05D000007 1.3e-12 77.4 66 50.0
Medtr1g032900 Medicago truncatula HOM05D016686 ORTHO05D000007 2.2e-12 76.6 73 42.5
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 2.2e-12 76.6 68 50.0
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 2.2e-12 76.6 57 57.9
TPR.G18365 Trifolium pratense HOM05D001538 ORTHO05D000007 2.9e-12 76.3 56 55.4
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 9.3e-11 71.2 77 45.5
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-10 70.1 56 55.4
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 2.1e-10 70.1 46 60.9
Medtr6g061130 Medicago truncatula HOM05D001538 ORTHO05D000007 7.9e-10 68.2 59 50.8
TPR.G32743 Trifolium pratense HOM05D001538 ORTHO05D000007 1.8e-09 67.0 76 46.1
Ca_26831_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 3.9e-09 65.9 42 69.0
Medtr8g040870 Medicago truncatula HOM05D001538 ORTHO05D000007 8.7e-09 64.7 69 46.4
TPR.G29890 Trifolium pratense HOM05D001538 ORTHO05D000007 2.5e-08 63.2 49 61.2
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-08 62.8 53 50.9
Aqoxy5G02676 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 4.3e-08 62.4 80 45.0
Medtr4g031410 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-08 62.4 90 35.6
Medtr4g031755 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-08 62.4 90 35.6
TPR.G36524 Trifolium pratense HOM05D001538 ORTHO05D000007 5.6e-08 62.0 56 50.0
Lj6A56G21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-07 60.8 61 42.6
Medtr4g031470 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-07 60.8 90 34.4
Medtr4g031785 Medicago truncatula HOM05D001538 ORTHO05D000007 1.3e-07 60.8 90 34.4
Phvul.001G160900 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 1.3e-07 60.8 65 44.6
Ca_02480_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.1e-07 60.1 42 61.9
Ca_07252_v3 Cicer arietinum L. HOM05D000420 ORTHO05D000110 2.1e-07 60.1 42 61.9
Ca_14247_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 2.1e-07 60.1 42 61.9
Lj3P309T4 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-07 60.1 81 35.8
Peaxi162Scf00401g00072 Petunia axillaris HOM05D001220 ORTHO05D000110 2.1e-07 60.1 106 35.8
TPR.G36613 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-07 59.7 89 40.4
Lj8P741T38 Lonicera japonica HOM05D002145 ORTHO05D000007 4.8e-07 58.9 109 24.8
SHI50181 Sapria himalayana HOM05D000003 ORTHO05D000007 4.8e-07 58.9 174 29.3
TPR.G2656 Trifolium pratense HOM05D001538 ORTHO05D000007 4.8e-07 58.9 48 52.1
Ca_02619_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 6.2e-07 58.5 42 59.5
Ca_02618_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 8.1e-07 58.2 42 61.9
Ca_24290_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 8.1e-07 58.2 42 59.5
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 8.1e-07 58.2 109 24.8
Ca_05572_v3 Cicer arietinum L. HOM05D000015 ORTHO05D000270 1.1e-06 57.8 39 61.5
Ca_26498_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 1.1e-06 57.8 42 59.5
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.4e-06 57.4 52 44.2
Medtr8g041780 Medicago truncatula HOM05D001538 ORTHO05D000007 1.8e-06 57.0 56 44.6
Ca_05911_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000224 2.4e-06 56.6 53 50.9
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 2.4e-06 56.6 90 30.0
Medtr2g038110 Medicago truncatula HOM05D001538 ORTHO05D000007 2.4e-06 56.6 82 35.4
TPR.G38827 Trifolium pratense HOM05D001538 ORTHO05D000007 2.4e-06 56.6 48 54.2
Ca_13764_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 3.1e-06 56.2 46 54.3
Ca_19138_v3 Cicer arietinum L. HOM05D008273 ORTHO05D000110 3.1e-06 56.2 42 59.5
PSO675G8250 Papaver somniferum HOM05D001538 ORTHO05D000007 3.1e-06 56.2 73 35.6
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 4.0e-06 55.8 138 24.6
Lju427A2T11 Lonicera japonica HOM05D001538 ORTHO05D000007 4.0e-06 55.8 62 41.9
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-06 55.8 75 41.3
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 4.0e-06 55.8 74 37.8
Lj8C741G12 Lonicera japonica HOM05D001538 ORTHO05D000007 5.3e-06 55.5 52 44.2
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 5.3e-06 55.5 70 35.7
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 5.3e-06 55.5 67 44.8
TPR.G39566 Trifolium pratense HOM05D001538 ORTHO05D000007 5.3e-06 55.5 55 49.1
Aqoxy2G01856 Aquilegia oxysepala HOM05D000003 ORTHO05D000007 6.9e-06 55.1 65 46.2
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 6.9e-06 55.1 86 32.6
Psat3g169080 Pisum sativum HOM05D001538 ORTHO05D000007 6.9e-06 55.1 64 40.6
PSO170G2308 Papaver somniferum HOM05D001538 ORTHO05D000007 9.0e-06 54.7 58 37.9
TPR.G977 Trifolium pratense HOM05D001538 ORTHO05D016346 9.0e-06 54.7 66 34.8


User provided reference genes

Program Settings