Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G3705 Trifolium pratense HOM05D007595 ORTHO05D009570 1.4e-128 464.5 722 100.0
Ca_08455_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 3.1e-46 191.0 705 55.0
Psat3g072800 Pisum sativum HOM05D007595 ORTHO05D009570 9.0e-46 189.5 109 82.6
Medtr7g091470 Medicago truncatula HOM05D007595 ORTHO05D009570 2.6e-45 188.0 105 82.9
Lj1g0026949 Lotus japonicus HOM05D007595 ORTHO05D009570 1.2e-42 179.1 109 75.2
CANSAT78G1456 Cannabis sativa HOM05D007595 ORTHO05D009570 6.0e-42 176.8 322 68.9
Ca_08452_v3 Cicer arietinum L. HOM05D007595 ORTHO05D009570 7.9e-42 176.4 109 76.1
Glyma.07G218100 Glycine max HOM05D007595 ORTHO05D009570 5.1e-41 173.7 109 75.2
Lsat_1_v5_gn_4_38381 Lactuca sativa HOM05D007595 ORTHO05D009570 8.7e-41 172.9 317 71.0
Glyma.20G014500 Glycine max HOM05D007595 ORTHO05D009570 8.1e-39 166.4 109 70.6
Phvul.002G094300 Phaseolus vulgaris HOM05D007595 ORTHO05D009570 8.1e-39 166.4 109 70.6
VMungo0251G3282 Vigna mungo HOM05D007595 ORTHO05D009570 4.5e-37 160.6 109 66.1
Hund27417 Selenicereus undatus HOM05D007595 ORTHO05D009570 5.8e-37 160.2 321 68.2
Lalb_Chr16g0384971 Lupinus albus HOM05D007595 ORTHO05D009570 1.7e-36 158.7 109 70.6
QL04p026468 Quercus lobata HOM05D007595 ORTHO05D009570 6.5e-36 156.8 109 66.1
MD02G1222500 Malus domestica HOM05D007595 ORTHO05D009570 8.4e-36 156.4 107 67.3
Atru.chr5.81 Acer truncatum HOM05D007595 ORTHO05D009570 2.5e-35 154.8 107 68.2
Prupe.1G180300 Prunus persica HOM05D007595 ORTHO05D009570 4.2e-35 154.1 107 67.3
Duzib138G0502 Durio zibethinus HOM05D007595 ORTHO05D009570 1.6e-34 152.1 107 69.2
Thecc.01G401700 Theobroma cacao HOM05D007595 ORTHO05D009570 1.6e-34 152.1 107 69.2
AUR62008574 Chenopodium quinoa HOM05D007595 ORTHO05D009570 2.1e-34 151.8 107 64.5
RcHm_v2.0_Chr7g0215291 Rosa chinensis HOM05D007595 ORTHO05D009570 2.1e-34 151.8 107 66.4
AUR62034666 Chenopodium quinoa HOM05D007595 ORTHO05D009570 6.0e-34 150.2 107 65.4
Ah.08g212430 Amaranthus hybridus HOM05D007595 ORTHO05D009570 7.9e-34 149.8 107 65.4
Cfa011030 Carpinus fangiana HOM05D007595 ORTHO05D009570 7.9e-34 149.8 107 68.2
Haze_02895 Corylus avellana HOM05D007595 ORTHO05D009570 7.9e-34 149.8 107 67.3
FvH4_5g25080 Fragaria vesca HOM05D007595 ORTHO05D009570 1.3e-33 149.1 107 65.4
FAN08G2497 Fragaria x ananassa HOM05D007595 ORTHO05D009570 1.8e-33 148.7 107 65.4
Lalb_Chr05g0219501 Lupinus albus HOM05D007595 ORTHO05D009570 6.7e-33 146.7 93 76.3
MSTRG.20666 Avicennia marina HOM05D007595 ORTHO05D009570 8.7e-33 146.4 299 71.9
COL.COLO4_12359 Corchorus olitorius HOM05D007595 ORTHO05D009570 8.7e-33 146.4 107 67.3
Actinidia05786 Actinidia chinensis HOM05D003161 ORTHO05D009570 1.5e-32 145.6 109 64.2
TWI59G0156 Tripterygium wilfordii HOM05D007595 ORTHO05D009570 1.5e-32 145.6 108 62.0
CSS0007679 Camellia sinensis var. sinensis HOM05D007595 ORTHO05D009570 1.9e-32 145.2 108 63.9
Sabra14G0039800 Salix brachista HOM05D007595 ORTHO05D009570 4.3e-32 144.1 107 64.5
Potri.014G052800 Populus trichocarpa HOM05D007595 ORTHO05D009570 5.7e-32 143.7 107 64.5
RcHm_v2.0_Chr4g0407101 Rosa chinensis HOM05D007595 ORTHO05D009570 7.4e-32 143.3 107 64.5
CANSAT54G2206 Cannabis sativa HOM05D007595 ORTHO05D009570 1.3e-31 142.5 109 61.5
Cc02_g25530 Coffea canephora HOM05D007595 ORTHO05D009570 1.3e-31 142.5 109 59.6
THA.LOC104811608 Tarenaya hassleriana HOM05D007595 ORTHO05D009570 1.6e-31 142.1 108 62.0
CiPaw.13G022600 Carya illinoinensis HOM05D007595 ORTHO05D009570 2.8e-31 141.4 109 60.6
Cc11_g12050 Coffea canephora HOM05D007595 ORTHO05D009570 2.8e-31 141.4 288 71.5
Ciclev10018805m.g Citrus clementina HOM05D007595 ORTHO05D009570 1.1e-30 139.4 108 59.3
PGSC0003DMG400001689 Solanum tuberosum HOM05D007595 ORTHO05D009570 1.1e-30 139.4 109 60.6
Aa31LG1G28920 Aethionema arabicum HOM05D007595 ORTHO05D009570 1.4e-30 139.0 304 69.4
Gohir.D12G101900 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.4e-30 139.0 107 61.7
Rhsim05G0178700 Rhododendron simsii HOM05D007595 ORTHO05D009570 1.4e-30 139.0 108 61.1
Gohir.A12G098700 Gossypium hirsutum HOM05D007595 ORTHO05D009570 1.8e-30 138.7 107 61.7
Manes.01G274800 Manihot esculenta HOM05D007595 ORTHO05D009570 1.8e-30 138.7 108 63.0
Oeu004640.1 Olea europaea HOM05D007595 ORTHO05D009570 1.8e-30 138.7 109 59.6
Sed0013429 Sechium edule HOM05D007595 ORTHO05D009570 1.8e-30 138.7 107 60.7
CANSAT25G1659 Cannabis sativa HOM05D007595 ORTHO05D009570 3.1e-30 137.9 108 61.1
Sc22g0000140 Simmondsia chinensis HOM05D007595 ORTHO05D009570 5.3e-30 137.1 109 58.7
Sc22g0001280 Simmondsia chinensis HOM05D007595 ORTHO05D009570 5.3e-30 137.1 109 58.7
Peaxi162Scf00793g00032 Petunia axillaris HOM05D007595 ORTHO05D009570 1.5e-29 135.6 105 61.0
vmacro09088 Vaccinium macrocarpon HOM05D007595 ORTHO05D009570 1.5e-29 135.6 108 61.1
SalBow5G3719 Salvia bowleyana HOM05D007595 ORTHO05D009570 3.4e-29 134.4 109 60.6
MELO3C006272.2 Cucumis melo HOM05D007595 ORTHO05D009570 7.6e-29 133.3 107 58.9
PSO675G4153 Papaver somniferum HOM05D007595 ORTHO05D009570 1.0e-28 132.9 294 69.0
CsaV3_3G010510 Cucumis sativus L. HOM05D007595 ORTHO05D009570 2.9e-28 131.3 107 57.9
ClCG05G002930 Citrullus lanatus HOM05D007595 ORTHO05D009570 3.8e-28 131.0 107 57.0
Rhsim07G0038800 Rhododendron simsii HOM05D007595 ORTHO05D009570 6.5e-28 130.2 337 47.2
SHI13644 Sapria himalayana HOM05D007595 ORTHO05D009570 1.1e-27 129.4 107 56.1
PSO732G0035 Papaver somniferum HOM05D007595 ORTHO05D009570 1.4e-27 129.0 295 66.8
EL10Ac7g17423 Beta vulgaris HOM05D007595 ORTHO05D009570 3.2e-27 127.9 107 56.1
Sopen01g035520 Solanum pennellii HOM05D007595 ORTHO05D009570 3.2e-27 127.9 100 59.0
Migut.B01494 Erythranthe guttata HOM05D007595 ORTHO05D009570 4.2e-27 127.5 109 56.0
SGA_v2.0_scaffold34G13580 Striga asiatica HOM05D007595 ORTHO05D009570 6.1e-26 123.6 109 56.0
RcHm_v2.0_Chr4g0407111 Rosa chinensis HOM05D007595 ORTHO05D009570 1.0e-25 122.9 85 67.1
Dinv44032 Davidia involucrata HOM05D007595 ORTHO05D009570 3.0e-25 121.3 110 54.5
CDE04G2406 Ceratophyllum demersum HOM05D007595 ORTHO05D009570 5.7e-24 117.1 109 50.5
GSVIVG01018339001 Vitis vinifera HOM05D007595 ORTHO05D009570 6.3e-23 113.6 85 61.2
Gorai.008G111100 Gossypium raimondii HOM05D007595 ORTHO05D009570 4.5e-21 107.5 85 58.8
Lj9C550T12 Lonicera japonica HOM05D007595 ORTHO05D009570 2.2e-20 105.1 76 61.8
Aqoxy7G02148 Aquilegia oxysepala HOM05D007595 ORTHO05D009570 5.0e-20 104.0 90 55.6
MBI04_g20744_MAGBIO Magnolia biondii HOM05D000404 ORTHO05D001765 5.0e-20 104.0 105 48.6
PSO732G0412 Papaver somniferum HOM05D007595 ORTHO05D009570 6.5e-20 103.6 94 51.1
CAN.G756.22 Capsicum annuum HOM05D007595 ORTHO05D009570 9.4e-19 99.8 76 63.2
HPP92_014879 Vanilla planifolia HOM05D007595 ORTHO05D009570 1.6e-18 99.0 107 45.8
Nitab4.5_0004273g0020 Nicotiana tabacum HOM05D007595 ORTHO05D009570 2.1e-18 98.6 76 60.5
Solyc01g088670.3 Solanum lycopersicum HOM05D007595 ORTHO05D009570 1.8e-17 95.5 86 51.2
TAR629G2414 Trochodendron aralioides HOM05D007595 ORTHO05D009570 3.0e-17 94.7 73 63.0
Sabra14G0039700 Salix brachista HOM05D007595 ORTHO05D009570 3.9e-17 94.4 89 51.7
DCAR_029507 Daucus carota HOM05D007595 ORTHO05D009570 3.3e-16 91.3 90 50.0
MD07G1093100 Malus domestica HOM05D007595 ORTHO05D009570 5.7e-16 90.5 86 52.3
Nitab4.5_0000563g0010 Nicotiana tabacum HOM05D007595 ORTHO05D009570 5.7e-16 90.5 86 48.8
Rhsim07G0038700 Rhododendron simsii HOM05D001455 ORTHO05D002670 7.4e-16 90.1 88 47.7
FAN18G0104 Fragaria x ananassa HOM05D007595 ORTHO05D009570 9.7e-16 89.7 85 54.1
Cpa.g.sc52.75 Carica papaya HOM05D007595 ORTHO05D009570 2.4e-14 85.1 86 52.3
HanXRQChr14g0457401 Helianthus annuus HOM05D007595 ORTHO05D009570 5.3e-14 84.0 86 44.2
PGR042G2115 Punica granatum HOM05D007595 ORTHO05D009570 6.9e-14 83.6 91 50.5
Nn1g00708 Nelumbo nucifera HOM05D007595 ORTHO05D009570 1.2e-13 82.8 85 44.7
AUR62026015 Chenopodium quinoa HOM05D007595 ORTHO05D009570 3.4e-13 81.3 65 55.4
ECA234G2641 Erigeron canadensis HOM05D007595 ORTHO05D009570 8.5e-12 76.6 87 43.7
Zm00001eb059330 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb121340 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb272070 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb324030 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb336430 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb398710 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb427360 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb442860 Zea mays HOM05D011046 ORTHO05D013342 1.4e-09 69.3 65 47.7
Zm00001eb191870 Zea mays HOM05D011046 ORTHO05D013342 3.0e-09 68.2 67 44.8
Zm00001eb224150 Zea mays HOM05D011046 ORTHO05D013342 8.8e-09 66.6 59 49.2
Eucgr.D01185 Eucalyptus grandis HOM05D007595 ORTHO05D009570 7.4e-08 63.5 54 53.7
Nitab4.5_0001130g0070 Nicotiana tabacum HOM05D000104 ORTHO05D009920 7.4e-08 63.5 91 36.3
Zm00001eb210080 Zea mays HOM05D011046 ORTHO05D013342 7.4e-08 63.5 59 45.8
Zm00001eb367370 Zea mays HOM05D011046 ORTHO05D013342 7.4e-08 63.5 59 45.8
Nitab4.5_0000103g0110 Nicotiana tabacum HOM05D000104 ORTHO05D009920 1.7e-07 62.4 91 36.3
THA.LOC104817005 Tarenaya hassleriana HOM05D000104 ORTHO05D009920 4.8e-07 60.8 91 33.0
Cc02_g04950 Coffea canephora HOM05D000104 ORTHO05D009920 6.3e-07 60.5 94 35.1
MBI18_g39550_MAGBIO Magnolia biondii HOM05D007956 ORTHO05D010152 8.2e-07 60.1 91 31.9
Sopen03g025210 Solanum pennellii HOM05D000104 ORTHO05D009920 8.2e-07 60.1 91 35.2
Aqoxy6G01416 Aquilegia oxysepala HOM05D006858 ORTHO05D008767 1.1e-06 59.7 94 33.0
Solyc03g095200.1 Solanum lycopersicum HOM05D000104 ORTHO05D009920 1.1e-06 59.7 91 35.2
Atru.chr2.3702 Acer truncatum HOM05D007390 ORTHO05D009114 2.4e-06 58.5 89 36.0
MBI05_g05281_MAGBIO Magnolia biondii HOM05D002890 ORTHO05D009847 2.4e-06 58.5 99 29.3
CiPaw.13G029800 Carya illinoinensis HOM05D000104 ORTHO05D009920 3.1e-06 58.2 110 28.2
Sc17g0007390 Simmondsia chinensis HOM05D002890 ORTHO05D009847 4.1e-06 57.8 97 33.0
SGA_v2.0_scaffold4G01915 Striga asiatica HOM05D002890 ORTHO05D009847 4.1e-06 57.8 109 33.0
Eucgr.D00277 Eucalyptus grandis HOM05D000104 ORTHO05D009920 7.0e-06 57.0 97 30.9
Nn5g26955 Nelumbo nucifera HOM05D000104 ORTHO05D009920 7.0e-06 57.0 97 35.1


User provided reference genes

Program Settings