Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 0.0e+00 1424.5 807 100.0
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 3.7e-266 921.8 865 67.2
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 2.1e-237 826.2 897 60.1
Psat4g006640 Pisum sativum HOM05D004628 ORTHO05D005166 3.0e-231 805.8 950 58.2
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 1.7e-186 657.1 936 50.2
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 8.2e-181 638.3 850 51.9
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 9.4e-161 571.6 870 48.0
Phvul.003G078900 Phaseolus vulgaris HOM05D004628 ORTHO05D005166 2.2e-157 560.5 868 46.2
VMungo1215G2063 Vigna mungo HOM05D004628 ORTHO05D005166 2.8e-157 560.1 860 47.7
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 5.7e-142 509.2 922 43.6
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 4.8e-141 506.1 914 43.0
arahy.Tifrunner.gnm1.ann1.V3P7C9 Arachis hypogaea HOM05D000513 ORTHO05D005786 2.6e-134 483.8 843 43.2
arahy.Tifrunner.gnm1.ann1.EFUN8Y Arachis hypogaea HOM05D004628 ORTHO05D005166 6.6e-130 469.2 845 42.8
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 2.2e-125 454.1 888 40.0
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 8.3e-109 399.1 873 37.9
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 1.1e-108 398.7 873 37.9
Lalb_Chr15g0087631 Lupinus albus HOM05D004628 ORTHO05D005166 4.0e-103 380.2 969 36.1
Psat6g212600 Pisum sativum HOM05D004628 ORTHO05D005166 2.6e-94 350.9 300 68.3
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 2.2e-85 321.2 926 33.4
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 2.2e-85 321.2 899 35.2
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 6.4e-85 319.7 831 35.4
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 1.2e-83 315.5 877 36.0
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 5.1e-82 310.1 903 34.2
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 1.1e-81 308.9 887 34.5
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 2.5e-81 307.8 966 33.3
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 1.4e-79 302.0 897 33.4
Cpa.g.sc106.25 Carica papaya HOM05D004628 ORTHO05D005166 6.7e-74 283.1 817 34.0
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 1.1e-73 282.3 883 32.8
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.5e-73 282.0 862 31.3
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 3.1e-71 274.2 864 35.2
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 2.0e-70 271.6 872 31.8
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 2.2e-69 268.1 867 32.8
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 4.9e-69 266.9 879 31.5
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 9.3e-68 262.7 907 32.4
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.2e-67 262.3 908 32.2
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.2e-67 262.3 870 31.0
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 2.1e-67 261.5 899 32.3
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 1.3e-66 258.8 869 34.4
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.9e-66 257.3 873 32.1
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 6.7e-66 256.5 893 32.1
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 8.7e-66 256.1 916 30.6
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 3.3e-65 254.2 859 33.1
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 7.4e-65 253.1 907 32.3
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 1.6e-64 251.9 887 32.6
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 3.1e-63 247.7 889 31.9
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 6.9e-63 246.5 908 30.2
Manes.07G052400 Manihot esculenta HOM05D004628 ORTHO05D005166 1.6e-59 235.3 866 31.9
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 4.6e-59 233.8 870 31.6
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 5.7e-57 226.9 862 30.9
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 3.7e-56 224.2 872 29.2
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 1.8e-55 221.9 857 32.1
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 5.9e-54 216.9 888 29.7
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 1.0e-53 216.1 886 31.8
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 6.5e-53 213.4 989 29.3
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 8.5e-53 213.0 846 30.0
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 5.5e-52 210.3 865 31.2
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 9.4e-52 209.5 957 30.2
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 4.7e-51 207.2 841 29.8
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 7.9e-51 206.5 928 29.5
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 1.0e-50 206.1 894 32.0
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 3.0e-50 204.5 879 29.7
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 5.1e-50 203.8 853 29.4
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.0e-49 201.8 883 31.0
Psat5g077040 Pisum sativum HOM05D004628 ORTHO05D005166 2.6e-49 201.4 190 66.8
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 3.3e-49 201.1 871 31.5
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 3.3e-49 201.1 853 29.3
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 3.7e-48 197.6 937 28.5
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 9.1e-47 193.0 921 28.4
Psat2g146240 Pisum sativum HOM05D004628 ORTHO05D005166 9.1e-47 193.0 278 46.0
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.2e-46 192.6 820 29.1
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 4.5e-46 190.7 897 30.0
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 1.3e-45 189.1 826 30.3
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 2.9e-45 188.0 889 31.0
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 2.9e-45 188.0 895 30.7
Ah.01g024550 Amaranthus hybridus HOM05D004628 ORTHO05D005166 5.5e-44 183.7 851 29.5
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 1.6e-43 182.2 925 29.0
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 5.2e-42 177.2 812 29.6
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 1.1e-41 176.0 865 31.0
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 3.7e-40 171.0 831 29.4
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 1.4e-39 169.1 831 28.6
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 5.3e-39 167.2 906 28.4
Prupe.8G151500 Prunus persica HOM05D004628 ORTHO05D005166 7.0e-39 166.8 290 43.4
PSO210G3573 Papaver somniferum HOM05D004628 ORTHO05D005166 2.6e-38 164.9 887 27.4
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 5.9e-38 163.7 812 28.6
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 1.0e-37 162.9 879 29.7
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 2.2e-37 161.8 811 27.9
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 3.8e-37 161.0 805 27.6
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 3.8e-37 161.0 818 27.1
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 4.2e-36 157.5 834 28.4
PSO447G0365 Papaver somniferum HOM05D004628 ORTHO05D005166 1.2e-35 156.0 905 27.6
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 5.2e-34 150.6 891 26.8
arahy.Tifrunner.gnm1.ann1.53VTV0 Arachis hypogaea HOM05D004628 ORTHO05D005166 6.8e-34 150.2 259 42.5
Sp3g29460 Schrenkiella parvula HOM05D004628 ORTHO05D005166 7.5e-33 146.7 905 26.0
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 1.7e-32 145.6 882 28.3
HanXRQChr04g0101671 Helianthus annuus HOM05D004628 ORTHO05D005166 2.8e-32 144.8 829 28.2
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 2.8e-32 144.8 857 26.7
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 3.7e-32 144.4 851 26.9
AT2G16270 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 1.4e-31 142.5 814 28.3
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 3.1e-31 141.4 893 26.4
Ah.01g007160 Amaranthus hybridus HOM05D004628 ORTHO05D005166 1.6e-30 139.0 809 26.7
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 4.5e-30 137.5 835 29.0
arahy.Tifrunner.gnm1.ann1.GD5ZZG Arachis hypogaea HOM05D004628 ORTHO05D005166 5.9e-30 137.1 249 42.6
MBI16_g18399_MAGBIO Magnolia biondii HOM05D004628 ORTHO05D005166 2.2e-29 135.2 380 32.6
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 8.5e-29 133.3 826 28.5
CARHR017100 Cardamine hirsuta HOM05D004628 ORTHO05D005166 8.5e-29 133.3 500 33.2
AT1G16630 Arabidopsis thaliana HOM05D004628 ORTHO05D005166 1.1e-28 132.9 910 26.9
Psat7g034040 Pisum sativum HOM05D000070 ORTHO05D007395 1.5e-28 132.5 125 73.6
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 4.2e-28 131.0 889 24.9
Psat0ss6263g0080 Pisum sativum HOM05D004165 ORTHO05D005166 4.2e-28 131.0 190 51.6
Psat0ss6263g0240 Pisum sativum HOM05D004165 ORTHO05D005166 5.5e-28 130.6 87 71.3
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 7.2e-28 130.2 892 27.0
BraA06t24423Z Brassica rapa HOM05D004628 ORTHO05D005166 6.1e-27 127.1 917 26.6
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 1.0e-26 126.3 831 28.8
Lsat_1_v5_gn_5_111860 Lactuca sativa HOM05D004628 ORTHO05D005166 1.0e-26 126.3 854 28.0
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 1.8e-26 125.6 830 28.8
A06p12620 Brassica napus HOM05D004628 ORTHO05D005166 3.0e-26 124.8 908 24.9
BolC5t30206H Brassica oleracea HOM05D004628 ORTHO05D005166 4.0e-26 124.4 906 26.9
GSVIVG01037037001 Vitis vinifera HOM05D004628 ORTHO05D005166 4.0e-26 124.4 117 60.7
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 5.2e-26 124.0 830 29.0
AL1G28790 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 8.8e-26 123.2 910 25.9
Carub.0001s1637 Capsella rubella HOM05D004628 ORTHO05D005166 2.6e-25 121.7 904 25.4
C05p14910 Brassica napus HOM05D004628 ORTHO05D005166 1.7e-24 119.0 918 25.2
Sp1g14770 Schrenkiella parvula HOM05D004628 ORTHO05D005166 1.4e-23 115.9 893 29.6
Thhalv10006806m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 1.8e-23 115.5 867 26.9
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 6.6e-21 107.1 843 26.6
BcaC05g25526 Brassica carinata HOM05D004628 ORTHO05D005166 2.8e-19 101.7 964 25.8
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 1.4e-18 99.4 185 42.7
Psat3g068120 Pisum sativum HOM05D000847 ORTHO05D002691 4.0e-18 97.8 85 65.9
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 6.8e-18 97.1 351 31.6
EL10Ac4g09112 Beta vulgaris HOM05D004628 ORTHO05D005166 8.9e-18 96.7 933 24.3
VMungo1215G3006 Vigna mungo HOM05D004628 ORTHO05D005166 1.2e-17 96.3 157 44.6
HPP92_001855 Vanilla planifolia HOM05D004628 ORTHO05D005166 1.7e-16 92.4 849 25.0
unitig_744.g24202 Utricularia gibba HOM05D004628 ORTHO05D005166 8.3e-16 90.1 825 25.2
Lsat_1_v5_gn_5_129280 Lactuca sativa HOM05D004628 ORTHO05D005166 1.0e-13 83.2 260 32.7
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 4.3e-12 77.8 116 49.1
CAN.G289.65 Capsicum annuum HOM05D004628 ORTHO05D005166 7.3e-12 77.0 283 30.4
Psat6g108080 Pisum sativum HOM05D004628 ORTHO05D005166 4.7e-11 74.3 72 77.8
Nitab4.5_0000575g0060 Nicotiana tabacum HOM05D004628 ORTHO05D005166 8.9e-10 70.1 127 44.1
ATR0767G029 Amborella trichopoda HOM05D004628 ORTHO05D005166 2.6e-09 68.6 184 32.6
SEGI_16491 Sequoiadendron giganteum HOM05D004628 ORTHO05D005166 2.6e-09 68.6 993 23.6
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 3.4e-09 68.2 76 51.3
FAN09G3722 Fragaria x ananassa HOM05D004628 ORTHO05D005166 3.4e-09 68.2 66 57.6
CAN.G289.55 Capsicum annuum HOM05D004628 ORTHO05D005166 2.9e-08 65.1 200 34.5
arahy.Tifrunner.gnm1.ann1.Z9P2D3 Arachis hypogaea HOM05D004628 ORTHO05D005166 3.7e-08 64.7 89 49.4
FvH4_6g23772 Fragaria vesca HOM05D004628 ORTHO05D005166 7.0e-07 60.5 79 49.4
CAN.G411.101 Capsicum annuum HOM05D002370 ORTHO05D005166 9.2e-07 60.1 783 23.6
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 9.2e-07 60.1 69 56.5
CAN.G289.56 Capsicum annuum HOM05D004628 ORTHO05D005166 1.2e-06 59.7 320 26.6
Sc10g0007610 Simmondsia chinensis HOM05D008208 ORTHO05D010143 1.6e-06 59.3 186 29.0
MD09G1201700 Malus domestica HOM05D008208 ORTHO05D010143 2.0e-06 58.9 235 28.1
TAR626G1368 Trochodendron aralioides HOM05D008208 ORTHO05D010143 6.0e-06 57.4 223 27.8
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 7.8e-06 57.0 65 53.8


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