Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G37004 Trifolium pratense HOM05D007037 ORTHO05D006691 8.8e-34 146.4 73 100.0
Ca_21080_v3 Cicer arietinum L. HOM05D007037 ORTHO05D006691 9.4e-28 126.3 73 84.9
Psat4g006560 Pisum sativum HOM05D007037 ORTHO05D006691 2.6e-25 118.2 73 83.6
Phvul.003G079400 Phaseolus vulgaris HOM05D007037 ORTHO05D006691 1.6e-22 109.0 65 78.5
Lj4g0019440 Lotus japonicus HOM05D007037 ORTHO05D006691 2.3e-21 105.1 71 74.6
Glyma.17G012900 Glycine max HOM05D007037 ORTHO05D006691 2.9e-21 104.8 65 76.9
Glyma.07G261100 Glycine max HOM05D007037 ORTHO05D006691 3.3e-20 101.3 65 75.4
Medtr4g132230 Medicago truncatula HOM05D007037 ORTHO05D006691 3.3e-20 101.3 74 79.7
Lalb_Chr07g0177181 Lupinus albus HOM05D007037 ORTHO05D006691 1.3e-16 89.4 65 66.2
Lalb_Chr13g0304241 Lupinus albus HOM05D007037 ORTHO05D006691 1.4e-15 85.9 65 64.6
Manes.16G006400 Manihot esculenta HOM05D007037 ORTHO05D006691 2.3e-13 78.6 78 53.8
Manes.01G159201 Manihot esculenta HOM05D007037 ORTHO05D006691 1.1e-12 76.3 78 52.6
Glyma.09G004000 Glycine max HOM05D007037 ORTHO05D006691 2.5e-12 75.1 64 64.1
QL05p073032 Quercus lobata HOM05D007037 ORTHO05D006691 2.5e-12 75.1 82 51.2
CSS0006945 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 4.3e-12 74.3 82 48.8
Oeu025269.1 Olea europaea HOM05D007037 ORTHO05D006691 5.6e-12 73.9 75 50.7
Potri.011G004400 Populus trichocarpa HOM05D007037 ORTHO05D006691 7.3e-12 73.6 76 55.3
Potri.004G013601 Populus trichocarpa HOM05D007037 ORTHO05D006691 1.6e-11 72.4 75 50.7
Prupe.4G019700 Prunus persica HOM05D007037 ORTHO05D006691 1.6e-11 72.4 85 49.4
CiPaw.09G092600 Carya illinoinensis HOM05D007037 ORTHO05D006691 2.1e-11 72.0 79 51.9
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 2.1e-11 72.0 76 52.6
MD10G1322200 Malus domestica HOM05D007037 ORTHO05D006691 1.0e-10 69.7 85 47.1
Ciclev10018055m.g Citrus clementina HOM05D007037 ORTHO05D006691 2.3e-10 68.6 65 53.8
Sabra04G0006400 Salix brachista HOM05D007037 ORTHO05D006691 2.3e-10 68.6 75 49.3
Lj6g0006723 Lotus japonicus HOM05D007037 ORTHO05D006691 3.1e-10 68.2 71 53.5
Nitab4.5_0009030g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 4.0e-10 67.8 80 48.8
Sabra11G0003500 Salix brachista HOM05D007037 ORTHO05D006691 5.2e-10 67.4 71 56.3
Atru.chr10.2236 Acer truncatum HOM05D007037 ORTHO05D006691 6.8e-10 67.0 77 50.6
TPR.G13436 Trifolium pratense HOM05D007037 ORTHO05D006691 6.8e-10 67.0 77 53.2
Medtr2g023440 Medicago truncatula HOM05D007037 ORTHO05D006691 1.5e-09 65.9 77 51.9
Nitab4.5_0000005g0340 Nicotiana tabacum HOM05D007037 ORTHO05D006691 1.5e-09 65.9 80 47.5
THA.LOC104823525 Tarenaya hassleriana HOM05D007037 ORTHO05D006691 1.5e-09 65.9 66 54.5
SalBow8G3366 Salvia bowleyana HOM05D007037 ORTHO05D006691 2.6e-09 65.1 50 62.0
Eucgr.E04050 Eucalyptus grandis HOM05D007037 ORTHO05D006691 3.4e-09 64.7 75 46.7
MD05G1347800 Malus domestica HOM05D007037 ORTHO05D006691 4.4e-09 64.3 76 47.4
Lsat_1_v5_gn_4_60821 Lactuca sativa HOM05D007037 ORTHO05D006691 7.5e-09 63.5 79 41.8
RcHm_v2.0_Chr5g0002881 Rosa chinensis HOM05D007037 ORTHO05D006691 7.5e-09 63.5 76 48.7
EL10Ac8g20067 Beta vulgaris HOM05D007037 ORTHO05D006691 9.8e-09 63.2 69 49.3
Gohir.A05G170900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 1.3e-08 62.8 75 48.0
Thecc.06G221700 Theobroma cacao HOM05D007037 ORTHO05D006691 1.3e-08 62.8 75 42.7
Sopen02g011150 Solanum pennellii HOM05D007037 ORTHO05D006691 2.9e-08 61.6 80 48.8
FAN25G2740 Fragaria x ananassa HOM05D007037 ORTHO05D006691 4.9e-08 60.8 77 42.9
Gohir.D05G173900 Gossypium hirsutum HOM05D007037 ORTHO05D006691 4.9e-08 60.8 77 46.8
Gorai.009G179200 Gossypium raimondii HOM05D007037 ORTHO05D006691 6.4e-08 60.5 77 46.8
Sp1g10350 Schrenkiella parvula HOM05D001191 ORTHO05D000979 8.3e-08 60.1 66 48.5
CiPaw.10G071700 Carya illinoinensis HOM05D007037 ORTHO05D006691 1.1e-07 59.7 76 46.1
BcaC05g25043 Brassica carinata HOM05D001191 ORTHO05D000979 1.4e-07 59.3 66 50.0
Hma1.2p1_0749F.1_g212630 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.4e-07 59.3 74 45.9
Hma1.2p1_0749F.1_g212635 Hydrangea macrophylla HOM05D007037 ORTHO05D006691 1.4e-07 59.3 74 45.9
A06p08290 Brassica napus HOM05D007037 ORTHO05D006691 1.9e-07 58.9 66 48.5
CSS0026389 Camellia sinensis var. sinensis HOM05D007037 ORTHO05D006691 1.9e-07 58.9 77 44.2
Duzib192G0147 Durio zibethinus HOM05D007037 ORTHO05D006691 1.9e-07 58.9 76 43.4
ECA234G0681 Erigeron canadensis HOM05D007037 ORTHO05D006691 1.9e-07 58.9 73 45.2
Thhalv10009555m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 1.9e-07 58.9 66 47.0
CARHR012050 Cardamine hirsuta HOM05D007037 ORTHO05D006691 2.4e-07 58.5 69 44.9
PGSC0003DMG400019869 Solanum tuberosum HOM05D007037 ORTHO05D006691 2.4e-07 58.5 72 47.2
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 3.2e-07 58.2 75 41.3
C05p09860 Brassica napus HOM05D007037 ORTHO05D006691 4.1e-07 57.8 66 48.5
ClCG01G021940 Citrullus lanatus HOM05D007037 ORTHO05D006691 4.1e-07 57.8 77 44.2
Sed0008683 Sechium edule HOM05D007037 ORTHO05D006691 4.1e-07 57.8 77 44.2
Sed0010286 Sechium edule HOM05D007037 ORTHO05D006691 4.1e-07 57.8 77 42.9
AT1G11740 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 5.4e-07 57.4 69 44.9
CsaV3_6G049020 Cucumis sativus L. HOM05D007037 ORTHO05D006691 5.4e-07 57.4 77 44.2
DCAR_008156 Daucus carota HOM05D007037 ORTHO05D006691 5.4e-07 57.4 77 45.5
Carub.0001s1138 Capsella rubella HOM05D007037 ORTHO05D006691 9.2e-07 56.6 69 44.9
COL.COLO4_00342 Corchorus olitorius HOM05D007037 ORTHO05D006691 9.2e-07 56.6 76 40.8
AL1G22910 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 1.2e-06 56.2 69 43.5
Migut.M01325 Erythranthe guttata HOM05D007037 ORTHO05D006691 1.2e-06 56.2 76 40.8
Peaxi162Scf00331g00119 Petunia axillaris HOM05D007037 ORTHO05D006691 1.6e-06 55.8 81 42.0
Cc09_g01610 Coffea canephora HOM05D007037 ORTHO05D006691 2.0e-06 55.5 74 43.2
Aa31LG1G3030 Aethionema arabicum HOM05D007037 ORTHO05D006691 2.7e-06 55.1 66 45.5
Nitab4.5_0005074g0010 Nicotiana tabacum HOM05D007037 ORTHO05D006691 2.7e-06 55.1 75 40.0
Peaxi162Scf01204g00120 Petunia axillaris HOM05D007037 ORTHO05D006691 6.0e-06 53.9 67 44.8
Nitab4.5_0002827g0030 Nicotiana tabacum HOM05D007037 ORTHO05D006691 7.8e-06 53.5 75 38.7


User provided reference genes

Program Settings