Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 0.0e+00 1581.6 837 100.0
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 0.0e+00 1215.3 844 78.9
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 0.0e+00 1096.6 839 73.9
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 1.4e-305 1052.7 849 68.9
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 3.9e-303 1044.6 848 69.1
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 2.1e-288 995.7 846 66.2
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 1.9e-273 946.0 839 64.7
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 2.7e-272 942.2 750 69.3
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 3.0e-271 938.7 845 64.3
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 5.6e-257 891.3 796 62.2
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 9.5e-257 890.6 805 61.6
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.8e-255 886.3 795 62.4
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 4.4e-254 881.7 820 58.8
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 7.5e-254 880.9 630 77.1
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 2.9e-253 879.0 832 59.5
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 2.7e-251 872.5 807 59.9
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 3.6e-248 862.1 790 60.5
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 8.0e-248 860.9 785 60.5
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.4e-247 860.1 781 59.3
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.8e-247 859.8 806 58.9
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 8.9e-247 857.4 795 60.4
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 5.8e-246 854.7 771 60.8
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 2.9e-245 852.4 762 62.2
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 8.3e-245 850.9 805 58.8
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.1e-244 848.6 832 57.5
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 3.5e-243 845.5 835 57.4
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 7.8e-243 844.3 804 59.2
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 2.3e-242 842.8 833 57.4
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 5.0e-242 841.6 874 54.3
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 5.0e-242 841.6 807 56.9
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.9e-241 839.7 856 57.2
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 3.3e-241 839.0 809 58.0
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 4.7e-240 835.1 863 55.9
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 5.8e-238 828.2 777 59.3
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 9.9e-238 827.4 747 60.5
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 1.2e-235 820.5 847 57.0
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 2.1e-235 819.7 794 58.2
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 1.1e-233 813.9 774 59.8
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 2.1e-232 809.7 776 57.6
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 3.1e-231 805.8 774 58.5
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 2.6e-230 802.7 828 54.1
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 7.6e-230 801.2 773 57.3
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 7.6e-230 801.2 833 55.8
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 4.1e-228 795.4 719 59.7
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.6e-227 793.5 835 55.7
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.6e-227 792.0 791 55.5
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 3.3e-225 785.8 804 55.1
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 4.0e-223 778.9 765 55.6
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 4.4e-222 775.4 765 55.6
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 3.8e-221 772.3 803 54.0
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 3.2e-220 769.2 798 54.9
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 7.1e-220 768.1 773 55.6
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 2.1e-219 766.5 783 54.7
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.3e-217 759.2 783 54.4
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.6e-216 756.9 751 57.7
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 2.1e-216 756.5 828 53.3
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 2.4e-215 753.1 768 53.5
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 1.5e-214 750.4 823 51.8
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 3.4e-214 749.2 771 54.3
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.5e-214 748.8 761 54.5
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.7e-213 746.9 773 53.8
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.2e-213 746.5 773 53.8
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.9e-213 746.1 818 52.7
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.9e-213 746.1 797 53.3
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.9e-213 746.1 843 50.1
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.9e-213 745.3 793 53.6
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 6.4e-213 745.0 760 53.9
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 8.4e-213 744.6 594 69.0
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.1e-212 744.2 837 51.6
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 1.3e-210 737.3 863 50.1
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 2.3e-210 736.5 780 53.7
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 3.3e-209 732.6 867 50.6
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 3.7e-208 729.2 865 50.2
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 4.8e-208 728.8 769 51.8
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 8.1e-208 728.0 770 53.5
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 9.0e-207 724.5 823 52.2
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 9.9e-206 721.1 821 50.4
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 2.2e-205 719.9 836 53.0
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.6e-203 713.8 814 50.9
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 7.6e-198 694.9 830 48.3
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 5.5e-196 688.7 801 52.1
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 5.5e-196 688.7 812 50.2
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.4e-190 669.5 709 52.6
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 6.1e-187 658.7 626 59.4
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 3.7e-184 649.4 766 49.1
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 1.1e-180 637.9 784 46.4
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 6.1e-179 632.1 538 66.4
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 5.1e-178 629.0 803 46.1
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 9.1e-175 618.2 750 48.7
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 6.1e-155 552.4 551 57.2
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.4e-154 551.2 767 45.9
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.0e-154 549.7 589 52.0
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.7e-152 544.3 803 42.2
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 2.3e-149 533.9 477 60.0
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 2.0e-142 510.8 635 47.9
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 8.6e-141 505.4 706 44.9
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.4e-135 488.0 506 53.6
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.3e-132 476.5 587 48.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 8.1e-123 445.7 470 51.1
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 9.9e-121 438.7 470 50.9
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 3.6e-115 420.2 787 36.3
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 1.3e-109 401.7 869 35.3
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 3.3e-84 317.4 798 33.0
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.2e-83 313.2 283 61.8
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 2.8e-75 287.7 397 42.8
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 2.3e-69 268.1 621 31.1
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.4e-65 254.2 234 59.0
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 3.2e-63 247.7 200 65.5
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 1.5e-60 238.8 245 56.3
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 9.4e-55 219.5 198 57.6
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 4.5e-49 200.7 251 48.2
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 9.4e-47 193.0 267 43.8
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 2.1e-46 191.8 859 24.4
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 3.7e-35 154.5 147 57.8
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 1.3e-27 129.4 143 55.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 3.3e-23 114.8 109 60.6
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 1.4e-21 109.4 146 46.6
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.3e-21 108.6 147 42.9
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 6.4e-11 73.9 68 50.0
Psat5g059800 Pisum sativum HOM05D000380 ORTHO05D320631 6.6e-08 63.9 48 64.6
Psat5g059840 Pisum sativum HOM05D000434 ORTHO05D007220 4.7e-06 57.8 30 86.7
SMO364G0541 Selaginella moellendorffii HOM05D000716 ORTHO05D004822 6.2e-06 57.4 216 24.1


User provided reference genes

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