Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 1.1e-191 673.3 400 100.0
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 1.8e-149 533.1 297 90.6
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 7.5e-127 458.0 297 78.8
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 5.8e-119 431.8 293 74.7
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 4.1e-117 425.6 241 85.1
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 1.2e-116 424.1 245 86.5
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 1.7e-115 420.2 287 72.8
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 3.9e-115 419.1 281 74.4
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 1.1e-114 417.5 290 71.7
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 1.6e-113 413.7 281 71.2
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 2.1e-113 413.3 295 69.8
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 3.6e-113 412.5 292 71.2
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 3.6e-113 412.5 290 72.4
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 4.7e-113 412.1 282 72.0
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 1.1e-112 411.0 281 73.0
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 1.8e-112 410.2 293 69.6
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.8e-112 410.2 279 73.1
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 1.8e-112 410.2 284 71.5
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 1.8e-112 410.2 282 72.7
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 2.0e-111 406.8 290 71.0
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 2.6e-111 406.4 287 70.7
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.6e-111 406.4 292 71.2
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 3.4e-111 406.0 281 70.8
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 4.4e-111 405.6 282 72.3
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 5.8e-111 405.2 281 70.8
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 1.3e-110 404.1 293 68.3
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 1.7e-110 403.7 283 71.7
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 2.9e-110 402.9 284 70.4
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 6.4e-110 401.7 282 70.9
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 8.3e-110 401.4 293 69.3
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 8.3e-110 401.4 294 67.0
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 1.1e-109 401.0 291 68.0
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 1.4e-109 400.6 295 68.8
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 1.4e-109 400.6 282 71.6
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 1.4e-109 400.6 294 69.0
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 3.2e-109 399.4 285 70.2
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 4.1e-109 399.1 291 68.4
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 5.4e-109 398.7 288 70.8
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 7.1e-109 398.3 290 68.6
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 7.1e-109 398.3 267 71.9
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 7.1e-109 398.3 280 70.7
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 9.2e-109 397.9 296 66.2
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 1.2e-108 397.5 296 66.2
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 1.2e-108 397.5 294 67.3
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 1.6e-108 397.1 289 68.5
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.6e-108 397.1 292 68.8
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.1e-108 396.7 280 70.7
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 4.6e-108 395.6 283 70.0
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.6e-108 395.6 294 66.3
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 6.0e-108 395.2 292 68.2
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 6.0e-108 395.2 292 67.8
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 6.0e-108 395.2 292 67.8
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 6.0e-108 395.2 292 67.8
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 6.0e-108 395.2 261 74.3
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 1.3e-107 394.0 292 67.8
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 1.3e-107 394.0 292 67.8
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.7e-107 393.7 284 68.7
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 5.1e-107 392.1 287 67.9
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 5.1e-107 392.1 287 67.9
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 5.1e-107 392.1 284 68.7
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 6.6e-107 391.7 296 66.6
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 1.1e-106 391.0 291 69.4
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 3.3e-106 389.4 302 65.6
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 5.6e-106 388.7 280 68.6
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 5.6e-106 388.7 288 67.7
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 9.5e-106 387.9 281 69.0
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 9.5e-106 387.9 288 67.7
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 2.8e-105 386.3 288 67.4
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 2.8e-105 386.3 281 69.0
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 3.6e-105 386.0 284 67.3
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 6.2e-105 385.2 285 67.4
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 1.1e-104 384.4 290 64.8
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 2.0e-103 380.2 284 67.3
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 2.0e-103 380.2 263 70.7
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 1.7e-102 377.1 282 65.2
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 2.9e-102 376.3 280 68.6
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 6.0e-100 368.6 283 66.1
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 7.3e-98 361.7 287 66.6
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 5.2e-96 355.5 302 59.9
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.0e-95 353.6 269 66.2
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 4.4e-95 352.4 292 61.0
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 1.0e-91 341.3 291 58.4
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 1.5e-90 337.4 288 58.7
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 1.9e-90 337.0 259 62.9
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 3.3e-90 336.3 263 63.9
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 4.3e-90 335.9 268 63.8
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 1.6e-89 334.0 258 61.2
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 5.3e-88 328.9 305 60.7
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.4e-87 326.2 260 60.4
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 9.9e-87 324.7 249 65.5
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.2e-85 319.7 247 66.8
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 7.1e-85 318.5 256 60.5
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 9.3e-85 318.2 265 58.1
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 9.3e-85 318.2 264 61.4
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 2.1e-84 317.0 256 60.2
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.5e-84 316.2 248 65.7
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 4.6e-84 315.8 268 57.5
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 7.9e-84 315.1 256 59.8
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.0e-83 314.7 265 57.4
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.3e-83 314.3 265 56.6
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 3.9e-83 312.8 260 58.5
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 1.9e-82 310.5 256 59.4
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.9e-82 310.5 262 56.5
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 1.3e-81 307.8 265 56.6
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 2.1e-81 307.0 282 57.1
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 6.2e-81 305.4 266 55.6
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 1.8e-80 303.9 266 55.6
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 4.0e-80 302.8 263 55.5
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 6.9e-80 302.0 254 57.1
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 6.9e-80 302.0 254 57.1
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 1.2e-79 301.2 265 55.5
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 2.6e-79 300.1 259 56.4
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 3.4e-79 299.7 256 56.2
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.3e-78 297.7 255 56.1
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 1.7e-78 297.4 188 77.1
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 4.9e-78 295.8 259 55.6
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 2.1e-76 290.4 256 57.8
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.5e-74 284.3 265 52.5
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.5e-74 284.3 265 52.5
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 5.6e-74 282.3 230 59.6
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 9.6e-74 281.6 176 80.1
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 2.8e-73 280.0 263 51.7
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 2.8e-73 280.0 263 51.7
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 4.8e-73 279.3 230 59.6
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 6.2e-73 278.9 232 59.9
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 1.0e-67 261.5 260 51.2
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.8e-67 260.8 251 51.4
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 5.1e-67 259.2 255 52.2
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 1.6e-65 254.2 253 53.8
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 5.3e-64 249.2 195 63.1
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 5.3e-64 249.2 242 52.5
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 6.9e-64 248.8 229 53.3
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 7.6e-63 245.4 256 50.0
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.3e-62 244.6 256 49.6
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 5.5e-61 239.2 193 61.7
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 2.7e-60 236.9 249 49.4
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 2.3e-59 233.8 166 67.5
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 3.8e-54 216.5 276 44.9
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 3.8e-54 216.5 224 51.8
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 1.4e-53 214.5 162 63.0
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.6e-52 211.1 180 56.7
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 1.6e-52 211.1 387 36.7
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 9.7e-50 201.8 255 44.3
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 8.5e-46 188.7 166 54.2
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.4e-45 188.0 125 71.2
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 7.2e-45 185.7 139 69.1
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.0e-43 181.8 146 58.2
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 9.7e-42 175.3 224 46.9
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.9e-38 163.7 202 49.5
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 3.2e-37 160.2 238 39.9
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 6.5e-30 136.0 134 54.5
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 2.7e-28 130.6 215 37.7
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 9.1e-24 115.5 122 51.6
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.2e-23 115.2 111 52.3
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 5.9e-23 112.8 243 30.9
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 7.7e-23 112.5 176 42.0
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 2.9e-22 110.5 211 34.6
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.5e-21 108.2 74 74.3
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 6.8e-19 99.4 65 73.8
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 1.2e-18 98.6 86 55.8
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 1.5e-18 98.2 181 35.9
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 3.4e-18 97.1 90 56.7
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 4.1e-16 90.1 68 67.6
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 4.5e-15 86.7 66 62.1
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 1.5e-13 81.6 69 58.0
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 3.6e-12 77.0 43 81.4
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.0e-11 75.5 57 64.9
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 3.0e-11 73.9 84 50.0
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 8.9e-11 72.4 58 63.8
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 1.7e-09 68.2 269 27.9
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 6.4e-09 66.2 75 46.7
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 3.9e-06 57.0 62 46.8


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