Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36961 Trifolium pratense HOM05D007719 ORTHO05D009782 6.1e-233 810.4 407 100.0
Medtr1g030640 Medicago truncatula HOM05D007719 ORTHO05D009782 2.9e-211 738.4 403 92.6
Psat0s3407g0080 Pisum sativum HOM05D007719 ORTHO05D009782 1.8e-208 729.2 402 91.8
Ca_25710_v3 Cicer arietinum L. HOM05D007719 ORTHO05D009782 1.6e-201 706.1 398 89.9
Lalb_Chr17g0338681 Lupinus albus HOM05D007719 ORTHO05D009782 8.6e-195 683.7 399 85.2
Glyma.09G119300 Glycine max HOM05D007719 ORTHO05D009782 4.5e-188 661.4 404 81.7
VMungo1215G2618 Vigna mungo HOM05D007719 ORTHO05D009782 4.5e-188 661.4 381 84.5
Lj2g0007830 Lotus japonicus HOM05D007719 ORTHO05D009782 2.9e-187 658.7 366 87.2
Phvul.003G022800 Phaseolus vulgaris HOM05D007719 ORTHO05D009782 2.9e-187 658.7 402 81.1
arahy.Tifrunner.gnm1.ann1.Y8VIVB Arachis hypogaea HOM05D007719 ORTHO05D009782 1.2e-180 636.7 402 79.9
QL01p001957 Quercus lobata HOM05D007719 ORTHO05D009782 1.2e-175 620.2 381 80.1
TWI75G0056 Tripterygium wilfordii HOM05D007719 ORTHO05D009782 4.9e-174 614.8 383 77.8
Dinv05161 Davidia involucrata HOM05D007719 ORTHO05D009782 1.4e-173 613.2 379 78.9
TAR629G1042 Trochodendron aralioides HOM05D007719 ORTHO05D009782 2.4e-173 612.5 379 79.2
FAN12G3181 Fragaria x ananassa HOM05D007719 ORTHO05D009782 5.4e-173 611.3 405 74.6
FvH4_4g32280 Fragaria vesca HOM05D007719 ORTHO05D009782 1.2e-172 610.1 403 74.9
Atru.chr11.428 Acer truncatum HOM05D007719 ORTHO05D009782 3.5e-172 608.6 399 75.4
CiPaw.05G248600 Carya illinoinensis HOM05D007719 ORTHO05D009782 1.0e-171 607.1 380 78.9
Potri.010G114100 Populus trichocarpa HOM05D007719 ORTHO05D009782 5.0e-171 604.7 392 77.0
Rhsim09G0099000 Rhododendron simsii HOM05D007719 ORTHO05D009782 6.6e-171 604.4 401 75.3
MD16G1029600 Malus domestica HOM05D007719 ORTHO05D009782 8.6e-171 604.0 405 74.3
FAN07G1524 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.3e-170 602.1 433 70.0
FAN22G2057 Fragaria x ananassa HOM05D007719 ORTHO05D009782 3.3e-170 602.1 403 73.9
vmacro10633 Vaccinium macrocarpon HOM05D007719 ORTHO05D009782 3.3e-170 602.1 403 74.9
CSS0046068 Camellia sinensis var. sinensis HOM05D007719 ORTHO05D009782 4.3e-170 601.7 377 78.0
Gohir.A12G150300 Gossypium hirsutum HOM05D007719 ORTHO05D009782 8.1e-169 597.4 401 74.3
Gorai.008G166400 Gossypium raimondii HOM05D007719 ORTHO05D009782 8.1e-169 597.4 401 74.1
ClCG01G006100 Citrullus lanatus HOM05D007719 ORTHO05D009782 1.4e-168 596.7 406 74.1
COL.COLO4_20469 Corchorus olitorius HOM05D007719 ORTHO05D009782 1.8e-168 596.3 400 73.5
PGR119G0428 Punica granatum HOM05D007719 ORTHO05D009782 1.8e-168 596.3 379 77.8
RcHm_v2.0_Chr4g0441071 Rosa chinensis HOM05D007719 ORTHO05D009782 3.4e-167 592.0 405 71.9
arahy.Tifrunner.gnm1.ann1.L198GP Arachis hypogaea HOM05D007719 ORTHO05D009782 4.4e-167 591.7 402 75.9
Eucgr.G02196 Eucalyptus grandis HOM05D007719 ORTHO05D009782 4.9e-166 588.2 409 73.3
Sed0008286 Sechium edule HOM05D007719 ORTHO05D009782 6.4e-166 587.8 405 74.8
EL10Ac3g06304 Beta vulgaris HOM05D007719 ORTHO05D009782 8.3e-166 587.4 403 73.4
CsaV3_5G028560 Cucumis sativus L. HOM05D007719 ORTHO05D009782 8.3e-166 587.4 404 73.0
Actinidia36679 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.1e-165 587.0 407 72.5
Sabra10G0084100 Salix brachista HOM05D007719 ORTHO05D009782 1.4e-165 586.6 431 68.4
Hund24987 Selenicereus undatus HOM05D007719 ORTHO05D009782 1.9e-165 586.3 373 77.7
Manes.15G114900 Manihot esculenta HOM05D007719 ORTHO05D009782 5.4e-165 584.7 356 79.8
ECA234G0976 Erigeron canadensis HOM05D007719 ORTHO05D009782 7.1e-165 584.3 404 72.8
FAN17G2178 Fragaria x ananassa HOM05D007719 ORTHO05D009782 9.2e-165 583.9 359 77.7
Sc11g0004120 Simmondsia chinensis HOM05D007719 ORTHO05D009782 1.3e-163 580.1 398 73.4
CAN.G1334.8 Capsicum annuum HOM05D007719 ORTHO05D009782 1.9e-162 576.2 404 71.5
Lsat_1_v5_gn_4_14941 Lactuca sativa HOM05D007719 ORTHO05D009782 1.2e-161 573.5 372 75.3
Sopen05g004110 Solanum pennellii HOM05D007719 ORTHO05D009782 8.1e-161 570.9 405 70.6
AUR62002606 Chenopodium quinoa HOM05D007719 ORTHO05D009782 1.4e-160 570.1 403 72.0
AUR62030024 Chenopodium quinoa HOM05D007719 ORTHO05D009782 2.4e-160 569.3 408 71.3
HanXRQChr17g0566951 Helianthus annuus HOM05D007719 ORTHO05D009782 4.0e-160 568.5 373 74.5
Solyc05g008270.3 Solanum lycopersicum HOM05D007719 ORTHO05D009782 4.4e-159 565.1 384 72.4
DCAR_030215 Daucus carota HOM05D007719 ORTHO05D009782 7.6e-159 564.3 356 76.7
Cc11_g08840 Coffea canephora HOM05D007719 ORTHO05D009782 2.4e-157 559.3 393 71.2
Ah.07g204110 Amaranthus hybridus HOM05D007719 ORTHO05D009782 3.2e-157 558.9 415 69.6
ATR0686G226 Amborella trichopoda HOM05D007719 ORTHO05D009782 7.1e-157 557.8 363 74.4
Os01g0127400 Oryza sativa ssp. japonica HOM05D007719 ORTHO05D009782 7.1e-157 557.8 384 72.7
PGSC0003DMG400030550 Solanum tuberosum HOM05D007719 ORTHO05D009782 2.1e-156 556.2 416 67.8
MSTRG.23215 Avicennia marina HOM05D007719 ORTHO05D009782 3.5e-156 555.4 406 69.5
Nitab4.5_0004776g0060 Nicotiana tabacum HOM05D007719 ORTHO05D009782 1.7e-155 553.1 350 76.9
Prupe.1G323300 Prunus persica HOM05D007719 ORTHO05D009782 3.6e-153 545.4 360 76.1
Oeu034423.3 Olea europaea HOM05D007719 ORTHO05D009782 1.2e-151 540.4 391 69.6
SalBow5G1767 Salvia bowleyana HOM05D007719 ORTHO05D009782 4.4e-151 538.5 376 72.6
SEGI_18275 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 2.2e-150 536.2 388 69.6
HPP92_021852 Vanilla planifolia HOM05D007719 ORTHO05D009782 3.8e-150 535.4 390 66.9
SGA_v2.0_scaffold25G10737 Striga asiatica HOM05D007719 ORTHO05D009782 2.1e-148 529.6 404 68.6
Migut.O00274 Erythranthe guttata HOM05D007719 ORTHO05D009782 3.5e-148 528.9 400 68.8
unitig_61.g26194 Utricularia gibba HOM05D007719 ORTHO05D009782 2.8e-145 519.2 362 71.3
Pp3c1_3200 Physcomitrium patens HOM05D007719 ORTHO05D009782 1.5e-143 513.5 354 70.3
Peaxi162Scf00205g00122 Petunia axillaris HOM05D007719 ORTHO05D009782 4.5e-143 511.9 402 66.2
Mapoly0070s0076 Marchantia polymorpha HOM05D007719 ORTHO05D009782 1.4e-141 506.9 356 68.0
MELO3C005317.2 Cucumis melo HOM05D007719 ORTHO05D009782 1.8e-139 500.0 401 65.1
SMO236G0033 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.9e-134 481.9 350 67.1
SMO236G0110 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 4.9e-134 481.9 350 67.1
Actinidia15254 Actinidia chinensis HOM05D007719 ORTHO05D009782 1.3e-129 467.2 408 62.0
GSVIVG01011772001 Vitis vinifera HOM05D007719 ORTHO05D009782 1.3e-129 467.2 300 78.3
CDE04G3405 Ceratophyllum demersum HOM05D007719 ORTHO05D009782 1.8e-128 463.4 369 66.7
Zm00001eb125300 Zea mays HOM05D007719 ORTHO05D009782 2.7e-124 449.5 394 59.9
Cpa.g.sc65.124 Carica papaya HOM05D007719 ORTHO05D009782 1.3e-113 414.1 258 77.9
Thecc.02G280000 Theobroma cacao HOM05D007719 ORTHO05D009782 2.2e-113 413.3 270 74.4
Gohir.D12G153900 Gossypium hirsutum HOM05D007719 ORTHO05D009782 2.0e-111 406.8 272 73.9
SMO187G0003 Selaginella moellendorffii HOM05D007719 ORTHO05D009782 1.8e-107 393.7 350 57.7
Haze_11019 Corylus avellana HOM05D007719 ORTHO05D009782 8.8e-107 391.3 315 67.0
AagrBONN_evm.TU.Sc2ySwM_228.3777 Anthoceros agrestis HOM05D007719 ORTHO05D009782 3.5e-95 352.8 275 64.4
Cfa008596 Carpinus fangiana HOM05D007719 ORTHO05D009782 7.7e-95 351.7 250 72.0
SEGI_23314 Sequoiadendron giganteum HOM05D007719 ORTHO05D009782 5.9e-87 325.5 231 70.6
Nn4g24120 Nelumbo nucifera HOM05D007719 ORTHO05D009782 2.6e-82 310.1 174 83.3
CBR_g12440 Chara braunii HOM05D007719 ORTHO05D009782 1.8e-80 303.9 351 47.3
Duzib268G0649 Durio zibethinus HOM05D007719 ORTHO05D009782 1.8e-67 260.8 227 59.9
GSVIVG01011775001 Vitis vinifera HOM05D007719 ORTHO05D009782 3.9e-62 243.0 145 82.1
Cfa008597 Carpinus fangiana HOM05D007719 ORTHO05D009782 1.5e-45 188.0 136 69.9
Haze_11018 Corylus avellana HOM05D007719 ORTHO05D009782 2.5e-45 187.2 133 70.7
TPR.G29132 Trifolium pratense HOM05D007719 ORTHO05D009782 1.6e-12 78.2 77 58.4


User provided reference genes

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