Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36945 Trifolium pratense HOM05D007597 ORTHO05D009608 1.4e-95 352.8 168 100.0
Medtr1g032560 Medicago truncatula HOM05D007597 ORTHO05D009608 3.1e-74 282.0 173 80.9
Psat6g046800 Pisum sativum HOM05D007597 ORTHO05D009608 2.1e-70 269.2 169 78.7
Lj2g0017292 Lotus japonicus HOM05D007597 ORTHO05D009608 1.8e-61 239.6 164 75.0
Phvul.003G017900 Phaseolus vulgaris HOM05D007597 ORTHO05D009608 5.0e-56 221.5 177 65.0
Lalb_Chr10g0095671 Lupinus albus HOM05D007597 ORTHO05D009608 6.5e-56 221.1 175 66.9
Glyma.02G085800 Glycine max HOM05D007597 ORTHO05D009608 1.0e-53 213.8 181 64.1
arahy.Tifrunner.gnm1.ann1.80S20J Arachis hypogaea HOM05D007597 ORTHO05D009608 4.3e-52 208.4 172 64.0
arahy.Tifrunner.gnm1.ann1.FU0M5P Arachis hypogaea HOM05D007597 ORTHO05D009608 2.8e-51 205.7 151 68.9
VMungo1215G2214 Vigna mungo HOM05D007597 ORTHO05D009608 1.8e-50 203.0 177 59.3
Haze_10869 Corylus avellana HOM05D007597 ORTHO05D009608 1.4e-45 186.8 162 59.3
Cfa015029 Carpinus fangiana HOM05D007597 ORTHO05D009608 9.7e-44 180.6 132 70.5
Duzib251G0764 Durio zibethinus HOM05D007597 ORTHO05D009608 2.2e-43 179.5 163 57.7
Nn3g20775 Nelumbo nucifera HOM05D007597 ORTHO05D009608 1.0e-40 170.6 158 55.7
Potri.008G135400 Populus trichocarpa HOM05D007597 ORTHO05D009608 1.0e-40 170.6 170 56.5
MD13G1019900 Malus domestica HOM05D007597 ORTHO05D009608 1.3e-40 170.2 123 69.1
CiPaw.06G052900 Carya illinoinensis HOM05D007597 ORTHO05D009608 1.7e-40 169.9 130 65.4
Cc11_g07700 Coffea canephora HOM05D007597 ORTHO05D009608 3.2e-39 165.6 166 53.6
QL93p0203_0030 Quercus lobata HOM05D007597 ORTHO05D009608 3.2e-39 165.6 173 55.5
Ciclev10016899m.g Citrus clementina HOM05D007597 ORTHO05D009608 5.5e-39 164.9 166 52.4
RcHm_v2.0_Chr4g0442791 Rosa chinensis HOM05D007597 ORTHO05D009608 5.5e-39 164.9 172 51.2
Actinidia38436 Actinidia chinensis HOM05D007597 ORTHO05D009608 2.1e-38 162.9 162 56.8
Atru.chr11.909 Acer truncatum HOM05D007597 ORTHO05D009608 2.7e-38 162.5 115 67.0
ClCG07G005520 Citrullus lanatus HOM05D007597 ORTHO05D009608 3.6e-38 162.2 145 59.3
AUR62037405 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.0e-37 160.6 146 57.5
Dinv07717 Davidia involucrata HOM05D007597 ORTHO05D009608 1.0e-37 160.6 115 70.4
Gohir.A04G143100 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.3e-37 159.5 162 51.9
Cpa.g.sc2.188 Carica papaya HOM05D007597 ORTHO05D009608 5.2e-37 158.3 111 68.5
FAN12G3867 Fragaria x ananassa HOM05D007597 ORTHO05D009608 5.2e-37 158.3 119 65.5
Sabra08G0103400 Salix brachista HOM05D007597 ORTHO05D009608 5.2e-37 158.3 126 64.3
FAN17G0527 Fragaria x ananassa HOM05D007597 ORTHO05D009608 8.8e-37 157.5 118 66.1
Aqoxy1G03694 Aquilegia oxysepala HOM05D007597 ORTHO05D009608 1.1e-36 157.1 161 52.2
Gorai.012G182800 Gossypium raimondii HOM05D007597 ORTHO05D009608 1.1e-36 157.1 164 49.4
Rhsim04G0170700 Rhododendron simsii HOM05D007597 ORTHO05D009608 1.1e-36 157.1 109 69.7
GSVIVG01011651001 Vitis vinifera HOM05D007597 ORTHO05D009608 1.1e-36 157.1 162 53.1
Lsat_1_v5_gn_1_105200 Lactuca sativa HOM05D007597 ORTHO05D009608 1.5e-36 156.8 121 64.5
FAN22G0955 Fragaria x ananassa HOM05D007597 ORTHO05D009608 2.0e-36 156.4 119 65.5
PGR142G2235 Punica granatum HOM05D007597 ORTHO05D009608 2.0e-36 156.4 140 62.1
FvH4_4g33480 Fragaria vesca HOM05D007597 ORTHO05D009608 3.3e-36 155.6 119 64.7
HanXRQChr17g0550621 Helianthus annuus HOM05D007597 ORTHO05D009608 4.4e-36 155.2 134 60.4
TWI53G0585 Tripterygium wilfordii HOM05D007597 ORTHO05D009608 4.4e-36 155.2 118 62.7
Eucgr.G02097 Eucalyptus grandis HOM05D007597 ORTHO05D009608 9.7e-36 154.1 160 51.2
vmacro08570 Vaccinium macrocarpon HOM05D007597 ORTHO05D009608 9.7e-36 154.1 126 63.5
AUR62034992 Chenopodium quinoa HOM05D007597 ORTHO05D009608 1.7e-35 153.3 129 61.2
Gohir.D04G186400 Gossypium hirsutum HOM05D007597 ORTHO05D009608 2.8e-35 152.5 116 62.9
EL10Ac1g02363 Beta vulgaris HOM05D007597 ORTHO05D009608 3.7e-35 152.1 128 61.7
Thecc.02G293900 Theobroma cacao HOM05D007597 ORTHO05D009608 3.7e-35 152.1 96 71.9
Peaxi162Scf00937g00322 Petunia axillaris HOM05D007597 ORTHO05D009608 2.4e-34 149.4 155 51.0
Prupe.1G334100 Prunus persica HOM05D007597 ORTHO05D009608 3.1e-34 149.1 96 71.9
ECA246G4875 Erigeron canadensis HOM05D007597 ORTHO05D009608 4.1e-34 148.7 111 68.5
MELO3C016661.2 Cucumis melo HOM05D007597 ORTHO05D009608 2.7e-33 146.0 134 56.7
CSS0036739 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 5.9e-33 144.8 125 61.6
CANSAT01G1232 Cannabis sativa HOM05D007597 ORTHO05D009608 1.1e-31 140.6 133 52.6
AT2G01755 Arabidopsis thaliana HOM05D007597 ORTHO05D009608 1.5e-31 140.2 117 58.1
Sp2g13210 Schrenkiella parvula HOM05D007597 ORTHO05D009608 1.9e-31 139.8 113 61.9
Zm00001eb216220 Zea mays HOM05D007597 ORTHO05D009608 2.5e-31 139.4 126 51.6
BcaC06g34122 Brassica carinata HOM05D007597 ORTHO05D009608 4.2e-31 138.7 116 60.3
BolC7t43776H Brassica oleracea HOM05D007597 ORTHO05D009608 4.2e-31 138.7 116 60.3
DCAR_030495 Daucus carota HOM05D007597 ORTHO05D009608 5.5e-31 138.3 117 55.6
THA.LOC104824124 Tarenaya hassleriana HOM05D007597 ORTHO05D009608 5.5e-31 138.3 118 55.9
Thhalv10004999m.g Eutrema salsugineum HOM05D007597 ORTHO05D009608 7.2e-31 137.9 117 59.8
A06p44080 Brassica napus HOM05D007597 ORTHO05D009608 1.6e-30 136.7 116 60.3
BraA06t27282Z Brassica rapa HOM05D007597 ORTHO05D009608 1.6e-30 136.7 116 60.3
PSO017G5208 Papaver somniferum HOM05D007597 ORTHO05D009608 1.6e-30 136.7 128 55.5
AL5G10880 Arabidopsis lyrata HOM05D007597 ORTHO05D009608 2.1e-30 136.3 110 60.0
C07p32430 Brassica napus HOM05D007597 ORTHO05D009608 2.1e-30 136.3 116 59.5
PSO478G0215 Papaver somniferum HOM05D007597 ORTHO05D009608 2.1e-30 136.3 128 57.8
Aa31LG2G8130 Aethionema arabicum HOM05D007597 ORTHO05D009608 4.7e-30 135.2 118 55.9
BcaC06g31279 Brassica carinata HOM05D007597 ORTHO05D009608 6.1e-30 134.8 117 59.8
ATR0118G012 Amborella trichopoda HOM05D007597 ORTHO05D009608 5.2e-29 131.7 110 60.9
PGSC0003DMG400026859 Solanum tuberosum HOM05D007597 ORTHO05D009608 1.2e-28 130.6 91 68.1
SalBow2G2924 Salvia bowleyana HOM05D007597 ORTHO05D009608 2.0e-28 129.8 159 42.1
Lj6P736T27 Lonicera japonica HOM05D007597 ORTHO05D009608 3.4e-28 129.0 86 67.4
CARHR144330 Cardamine hirsuta HOM05D007597 ORTHO05D009608 1.7e-27 126.7 119 55.5
MSTRG.13629 Avicennia marina HOM05D007597 ORTHO05D009608 2.8e-27 125.9 115 53.9
CSS0009732 Camellia sinensis var. sinensis HOM05D007597 ORTHO05D009608 2.8e-27 125.9 90 67.8
Solyc03g006540.3 Solanum lycopersicum HOM05D007597 ORTHO05D009608 1.4e-26 123.6 91 64.8
Os03g0713200 Oryza sativa ssp. japonica HOM05D007597 ORTHO05D009608 5.4e-26 121.7 96 55.2
Migut.E00488 Erythranthe guttata HOM05D007597 ORTHO05D009608 3.8e-24 115.5 96 58.3
Oeu031613.1 Olea europaea HOM05D007597 ORTHO05D009608 3.8e-24 115.5 90 57.8
Glyma.07G171100 Glycine max HOM05D007597 ORTHO05D009608 2.5e-23 112.8 104 57.7
Sopen03g002540 Solanum pennellii HOM05D007597 ORTHO05D009608 3.2e-23 112.5 79 67.1
Carub.0005s0071 Capsella rubella HOM05D007597 ORTHO05D009608 2.1e-22 109.8 93 57.0
Sed0011475 Sechium edule HOM05D007597 ORTHO05D009608 3.6e-22 109.0 121 51.2
COL.COLO4_16605 Corchorus olitorius HOM05D007597 ORTHO05D009608 1.3e-19 100.5 67 62.7
AagrBONN_evm.TU.Sc2ySwM_228.3100 Anthoceros agrestis HOM05D007597 ORTHO05D009608 1.7e-19 100.1 93 48.4
CBR_g61471 Chara braunii HOM05D007597 ORTHO05D009608 1.2e-17 94.0 87 50.6
Pp3c16_25200 Physcomitrium patens HOM05D007597 ORTHO05D009608 3.8e-16 89.0 136 36.8
QL03p036112 Quercus lobata HOM05D007597 ORTHO05D009608 2.3e-13 79.7 123 44.7
TAR371G0144 Trochodendron aralioides HOM05D007597 ORTHO05D009608 7.5e-12 74.7 90 50.0
Nitab4.5_0006778g0040 Nicotiana tabacum HOM05D007597 ORTHO05D009608 1.7e-11 73.6 62 61.3
SMO115G0274 Selaginella moellendorffii HOM05D007597 ORTHO05D009608 9.2e-10 67.8 89 39.3
FAN07G1480 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.2e-09 67.4 62 58.1
FAN07G2660 Fragaria x ananassa HOM05D007597 ORTHO05D009608 1.2e-09 67.4 62 58.1
Nitab4.5_0000241g0020 Nicotiana tabacum HOM05D007597 ORTHO05D009608 5.9e-09 65.1 45 71.1
Manes.17G084450 Manihot esculenta HOM05D007597 ORTHO05D000073 5.6e-07 58.5 39 71.8


User provided reference genes

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