Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36897 Trifolium pratense HOM05D007681 ORTHO05D009734 3.7e-94 348.2 177 100.0
Psat6g044480 Pisum sativum HOM05D007681 ORTHO05D009734 1.2e-71 273.5 178 78.7
Medtr1g031740 Medicago truncatula HOM05D007681 ORTHO05D009734 9.8e-71 270.4 185 77.3
Ca_12590_v3 Cicer arietinum L. HOM05D007681 ORTHO05D009734 7.6e-55 217.6 177 66.7
Lj5g0022624 Lotus japonicus HOM05D007681 ORTHO05D009734 3.8e-38 162.2 172 55.2
Glyma.07G166400 Glycine max HOM05D007681 ORTHO05D009734 1.9e-37 159.8 178 55.6
Lj2g0022739 Lotus japonicus HOM05D007681 ORTHO05D009734 1.1e-34 150.6 172 52.3
Lalb_Chr10g0095991 Lupinus albus HOM05D007681 ORTHO05D009734 8.1e-33 144.4 183 50.8
Phvul.003G022100 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 2.4e-32 142.9 178 50.0
Cfa014982 Carpinus fangiana HOM05D007681 ORTHO05D009734 6.7e-27 124.8 178 46.6
Ciclev10016943m.g Citrus clementina HOM05D007681 ORTHO05D009734 8.7e-27 124.4 177 44.1
CiPaw.06G048600 Carya illinoinensis HOM05D007681 ORTHO05D009734 3.7e-25 119.0 181 47.5
CsaV3_5G014700 Cucumis sativus L. HOM05D007681 ORTHO05D009734 8.1e-25 117.9 186 44.1
Lsat_1_v5_gn_8_44280 Lactuca sativa HOM05D007681 ORTHO05D009734 4.0e-24 115.5 182 41.2
arahy.Tifrunner.gnm1.ann1.2VU2GF Arachis hypogaea HOM05D007681 ORTHO05D009734 9.0e-24 114.4 90 66.7
CARHR144140 Cardamine hirsuta HOM05D007681 ORTHO05D009734 9.0e-24 114.4 165 41.8
Sed0010427 Sechium edule HOM05D007681 ORTHO05D009734 1.2e-23 114.0 142 46.5
Thecc.02G287600 Theobroma cacao HOM05D007681 ORTHO05D009734 4.5e-23 112.1 125 48.0
Actinidia36647 Actinidia chinensis HOM05D007681 ORTHO05D009734 2.2e-22 109.8 164 39.6
Dinv28046 Davidia involucrata HOM05D007681 ORTHO05D009734 6.5e-22 108.2 116 51.7
Gohir.1Z015700 Gossypium hirsutum HOM05D007681 ORTHO05D009734 6.5e-22 108.2 117 52.1
Gohir.A01G150154 Gossypium hirsutum HOM05D007681 ORTHO05D009734 6.5e-22 108.2 117 52.1
Gorai.002G176600 Gossypium raimondii HOM05D007681 ORTHO05D009734 6.5e-22 108.2 117 52.1
arahy.Tifrunner.gnm1.ann1.W0FD01 Arachis hypogaea HOM05D007681 ORTHO05D009734 1.4e-21 107.1 117 52.1
Carub.0005s0053 Capsella rubella HOM05D007681 ORTHO05D009734 1.4e-21 107.1 180 41.7
Sp2g13030 Schrenkiella parvula HOM05D007681 ORTHO05D009734 1.9e-21 106.7 159 41.5
ClCG07G005970 Citrullus lanatus HOM05D007681 ORTHO05D009734 2.5e-21 106.3 178 43.3
Aa31LG2G8310 Aethionema arabicum HOM05D007681 ORTHO05D009734 3.2e-21 105.9 121 48.8
BcaB07g30389 Brassica carinata HOM05D007681 ORTHO05D009734 4.2e-21 105.5 157 43.3
BcaC03g17055 Brassica carinata HOM05D007681 ORTHO05D009734 4.2e-21 105.5 156 45.5
Thhalv10005039m.g Eutrema salsugineum HOM05D007681 ORTHO05D009734 5.5e-21 105.1 157 42.7
Gohir.D01G143200 Gossypium hirsutum HOM05D007681 ORTHO05D009734 5.5e-21 105.1 117 51.3
C02p49750 Brassica napus HOM05D007681 ORTHO05D009734 9.3e-21 104.4 156 44.9
BolC2t11054H Brassica oleracea HOM05D007681 ORTHO05D009734 1.2e-20 104.0 159 42.1
A02p32170 Brassica napus HOM05D007681 ORTHO05D009734 2.1e-20 103.2 156 44.9
BraA02t08231Z Brassica rapa HOM05D007681 ORTHO05D009734 2.1e-20 103.2 155 43.2
Prupe.1G330200 Prunus persica HOM05D007681 ORTHO05D009734 2.1e-20 103.2 140 45.0
Cpa.g.sc2.238 Carica papaya HOM05D007681 ORTHO05D009734 2.7e-20 102.8 163 42.9
Hma1.2p1_0330F.1_g127440 Hydrangea macrophylla HOM05D007681 ORTHO05D009734 2.7e-20 102.8 187 42.8
TWI77G0184 Tripterygium wilfordii HOM05D007681 ORTHO05D009734 3.5e-20 102.4 182 38.5
AT2G01590 Arabidopsis thaliana HOM05D007681 ORTHO05D009734 6.0e-20 101.7 176 39.2
AL5G10680 Arabidopsis lyrata HOM05D007681 ORTHO05D009734 1.0e-19 100.9 167 40.7
CANSAT01G2988 Cannabis sativa HOM05D007681 ORTHO05D009734 1.3e-19 100.5 153 41.8
Manes.15G131200 Manihot esculenta HOM05D007681 ORTHO05D009734 1.8e-19 100.1 161 41.0
FAN17G1502 Fragaria x ananassa HOM05D007681 ORTHO05D009734 3.9e-19 99.0 132 45.5
Atru.chr11.647 Acer truncatum HOM05D007681 ORTHO05D009734 6.7e-19 98.2 158 38.6
Eucgr.B02939 Eucalyptus grandis HOM05D007681 ORTHO05D009734 6.7e-19 98.2 164 37.8
Oeu063591.1 Olea europaea HOM05D007681 ORTHO05D009734 6.7e-19 98.2 175 38.3
TAR629G0584 Trochodendron aralioides HOM05D007681 ORTHO05D009734 8.7e-19 97.8 163 41.7
Phvul.005G062000 Phaseolus vulgaris HOM05D007681 ORTHO05D009734 1.1e-18 97.4 78 62.8
ECA233G2077 Erigeron canadensis HOM05D007681 ORTHO05D009734 1.5e-18 97.1 160 39.4
RcHm_v2.0_Chr4g0443571 Rosa chinensis HOM05D007681 ORTHO05D009734 2.5e-18 96.3 144 43.8
Sabra10G0080500 Salix brachista HOM05D007681 ORTHO05D009734 2.5e-18 96.3 178 39.9
FAN22G1679 Fragaria x ananassa HOM05D007681 ORTHO05D009734 3.3e-18 95.9 132 44.7
MD13G1021700 Malus domestica HOM05D007681 ORTHO05D009734 4.3e-18 95.5 140 42.1
AUR62013520 Chenopodium quinoa HOM05D007681 ORTHO05D009734 5.7e-18 95.1 173 41.0
Nitab4.5_0000018g0170 Nicotiana tabacum HOM05D007681 ORTHO05D009734 5.7e-18 95.1 121 44.6
Migut.L00587 Erythranthe guttata HOM05D007681 ORTHO05D009734 7.4e-18 94.7 176 39.2
Potri.010G110100 Populus trichocarpa HOM05D007681 ORTHO05D009734 9.6e-18 94.4 188 38.8
unitig_26.g8951 Utricularia gibba HOM05D007681 ORTHO05D009734 9.6e-18 94.4 143 42.7
FvH4_4g34062 Fragaria vesca HOM05D007681 ORTHO05D009734 1.3e-17 94.0 152 41.4
Nitab4.5_0001343g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 2.8e-17 92.8 173 39.9
PSO017G3157 Papaver somniferum HOM05D007681 ORTHO05D009734 4.8e-17 92.0 123 44.7
PGSC0003DMG400015899 Solanum tuberosum HOM05D007681 ORTHO05D009734 6.2e-17 91.7 145 41.4
Nitab4.5_0012949g0010 Nicotiana tabacum HOM05D007681 ORTHO05D009734 8.2e-17 91.3 181 38.1
Rhsim09G0093700 Rhododendron simsii HOM05D007681 ORTHO05D009734 1.4e-16 90.5 109 46.8
Sopen05g023100 Solanum pennellii HOM05D007681 ORTHO05D009734 1.4e-16 90.5 139 41.7
MSTRG.7616 Avicennia marina HOM05D007681 ORTHO05D009734 1.8e-16 90.1 173 36.4
HanXRQChr12g0363581 Helianthus annuus HOM05D007681 ORTHO05D009734 1.8e-16 90.1 169 37.9
PGR102G0336 Punica granatum HOM05D007681 ORTHO05D009734 1.8e-16 90.1 154 39.0
Solyc05g026570.3 Solanum lycopersicum HOM05D007681 ORTHO05D009734 1.8e-16 90.1 145 40.7
Nn3g18293 Nelumbo nucifera HOM05D007681 ORTHO05D009734 5.3e-16 88.6 117 46.2
PSO478G3571 Papaver somniferum HOM05D007681 ORTHO05D009734 9.0e-16 87.8 166 38.0
EL10Ac1g01492 Beta vulgaris HOM05D007681 ORTHO05D009734 2.6e-15 86.3 147 40.1
AUR62026755 Chenopodium quinoa HOM05D007681 ORTHO05D009734 2.6e-15 86.3 183 39.3
Peaxi162Scf00376g00013 Petunia axillaris HOM05D007681 ORTHO05D009734 2.9e-14 82.8 70 57.1
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 1.1e-13 80.9 128 39.8
Aqoxy3G00048 Aquilegia oxysepala HOM05D007681 ORTHO05D009734 5.5e-13 78.6 155 38.1
GSVIVG01011705001 Vitis vinifera HOM05D007681 ORTHO05D009734 1.2e-12 77.4 136 39.7
Lj6A742G71 Lonicera japonica HOM05D007681 ORTHO05D009734 1.3e-11 73.9 90 47.8
Ah.01g006360 Amaranthus hybridus HOM05D007681 ORTHO05D009734 2.3e-11 73.2 169 34.3
THA.LOC104805073 Tarenaya hassleriana HOM05D007681 ORTHO05D009734 8.7e-11 71.2 125 39.2
Os09g0306650 Oryza sativa ssp. japonica HOM05D007681 ORTHO05D009734 6.3e-09 65.1 139 31.7
MELO3C026423.2 Cucumis melo HOM05D007681 ORTHO05D009734 9.0e-08 61.2 141 34.0
MBI16_g06252_MAGBIO Magnolia biondii HOM05D007681 ORTHO05D009734 2.6e-07 59.7 68 41.2
Zm00001eb309450 Zea mays HOM05D007681 ORTHO05D009734 2.9e-06 56.2 133 31.6


User provided reference genes

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