Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36832 Trifolium pratense HOM05D006252 ORTHO05D007909 7.2e-99 364.0 195 100.0
Psat7g223760 Pisum sativum HOM05D006252 ORTHO05D007909 2.5e-83 312.4 195 84.6
Ca_19323_v3 Cicer arietinum L. HOM05D006252 ORTHO05D007909 1.1e-78 297.0 198 81.8
Medtr4g057210 Medicago truncatula HOM05D006252 ORTHO05D007909 1.6e-77 293.1 195 81.5
Glyma.12G081500 Glycine max HOM05D006252 ORTHO05D007909 3.6e-74 282.0 195 77.9
Glyma.11G192500 Glycine max HOM05D006252 ORTHO05D007909 4.0e-73 278.5 196 77.0
Phvul.011G086500 Phaseolus vulgaris HOM05D006252 ORTHO05D007909 4.0e-73 278.5 192 76.0
VMungo1127G0830 Vigna mungo HOM05D006252 ORTHO05D007909 6.8e-73 277.7 192 75.5
Lj3g0021853 Lotus japonicus HOM05D006252 ORTHO05D007909 2.4e-70 269.2 194 74.2
Lalb_Chr19g0136901 Lupinus albus HOM05D006252 ORTHO05D007909 5.4e-70 268.1 196 75.5
PGR102G1698 Punica granatum HOM05D006252 ORTHO05D007909 9.2e-70 267.3 193 73.1
Gorai.009G090100 Gossypium raimondii HOM05D006252 ORTHO05D007909 1.7e-68 263.1 195 70.3
Manes.11G152500 Manihot esculenta HOM05D006252 ORTHO05D007909 2.3e-68 262.7 193 72.5
Lalb_Chr03g0027721 Lupinus albus HOM05D006252 ORTHO05D007909 3.8e-68 261.9 194 73.2
arahy.Tifrunner.gnm1.ann1.Q498P0 Arachis hypogaea HOM05D006252 ORTHO05D007909 5.0e-68 261.5 196 72.4
Gohir.D05G088000 Gossypium hirsutum HOM05D006252 ORTHO05D007909 5.0e-68 261.5 195 69.7
FAN16G0084 Fragaria x ananassa HOM05D006252 ORTHO05D007909 6.6e-68 261.2 193 71.5
FvH4_3g30600 Fragaria vesca HOM05D006252 ORTHO05D007909 8.6e-68 260.8 193 71.5
FAN11G0619 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.6e-68 260.8 193 71.5
FAN25G2218 Fragaria x ananassa HOM05D006252 ORTHO05D007909 8.6e-68 260.8 195 70.3
FAN21G1285 Fragaria x ananassa HOM05D006252 ORTHO05D007909 1.1e-67 260.4 195 70.3
CiPaw.13G122300 Carya illinoinensis HOM05D006252 ORTHO05D007909 1.5e-67 260.0 195 69.7
Gohir.A05G086700 Gossypium hirsutum HOM05D006252 ORTHO05D007909 1.5e-67 260.0 195 69.2
Potri.004G217000 Populus trichocarpa HOM05D006252 ORTHO05D007909 1.5e-67 260.0 194 70.6
Thecc.09G298300 Theobroma cacao HOM05D006252 ORTHO05D007909 2.5e-67 259.2 192 69.3
Cpa.g.sc47.1 Carica papaya HOM05D006252 ORTHO05D007909 4.3e-67 258.5 197 69.5
Sabra04G0147700 Salix brachista HOM05D006252 ORTHO05D007909 1.6e-66 256.5 195 68.7
Cc01_g10250 Coffea canephora HOM05D006252 ORTHO05D007909 2.1e-66 256.1 171 76.0
COL.COLO4_19198 Corchorus olitorius HOM05D006252 ORTHO05D007909 2.1e-66 256.1 192 68.8
Sabra09G0002100 Salix brachista HOM05D006252 ORTHO05D007909 2.1e-66 256.1 194 68.6
Atru.chr3.3505 Acer truncatum HOM05D006252 ORTHO05D007909 2.8e-66 255.8 188 71.8
CSS0004051 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.8e-66 255.8 194 72.2
CSS0044427 Camellia sinensis var. sinensis HOM05D006252 ORTHO05D007909 2.8e-66 255.8 194 72.2
Ciclev10029219m.g Citrus clementina HOM05D006252 ORTHO05D007909 2.8e-66 255.8 196 69.9
Cc08_g04460 Coffea canephora HOM05D006252 ORTHO05D007909 2.8e-66 255.8 171 75.4
RcHm_v2.0_Chr5g0056671 Rosa chinensis HOM05D006252 ORTHO05D007909 2.8e-66 255.8 195 69.2
arahy.Tifrunner.gnm1.ann1.4A8W5C Arachis hypogaea HOM05D006252 ORTHO05D007909 4.7e-66 255.0 196 70.9
THA.LOC104810882 Tarenaya hassleriana HOM05D006252 ORTHO05D007909 4.7e-66 255.0 195 69.2
MD03G1128600 Malus domestica HOM05D006252 ORTHO05D007909 6.1e-66 254.6 194 70.6
QL01p014977 Quercus lobata HOM05D006252 ORTHO05D007909 1.8e-65 253.1 194 70.1
Lj2A1006G34 Lonicera japonica HOM05D006252 ORTHO05D007909 3.0e-65 252.3 196 70.4
MD11G1148800 Malus domestica HOM05D006252 ORTHO05D007909 3.0e-65 252.3 194 70.1
Prupe.6G113200 Prunus persica HOM05D006252 ORTHO05D007909 5.2e-65 251.5 193 68.9
ECA233G2302 Erigeron canadensis HOM05D006252 ORTHO05D007909 6.8e-65 251.1 177 74.0
AL5G23350 Arabidopsis lyrata HOM05D006252 ORTHO05D007909 1.2e-64 250.4 198 67.7
Lsat_1_v5_gn_6_43381 Lactuca sativa HOM05D006252 ORTHO05D007909 1.2e-64 250.4 190 70.0
Sed0008981 Sechium edule HOM05D006252 ORTHO05D007909 1.2e-64 250.4 189 69.8
Thhalv10002672m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.0e-64 249.6 198 67.2
HanXRQChr02g0055341 Helianthus annuus HOM05D006252 ORTHO05D007909 4.4e-64 248.4 179 72.6
Solyc11g066410.2 Solanum lycopersicum HOM05D006252 ORTHO05D007909 5.7e-64 248.1 187 70.6
PGSC0003DMG400000456 Solanum tuberosum HOM05D006252 ORTHO05D007909 5.7e-64 248.1 187 70.6
HPP92_003365 Vanilla planifolia HOM05D006252 ORTHO05D007909 5.7e-64 248.1 165 75.8
Actinidia07187 Actinidia chinensis HOM05D006252 ORTHO05D007909 7.5e-64 247.7 193 67.4
Aa31LG4G14200 Aethionema arabicum HOM05D006252 ORTHO05D007909 9.8e-64 247.3 198 65.7
ClCG03G002460 Citrullus lanatus HOM05D006252 ORTHO05D007909 9.8e-64 247.3 175 71.4
Sp5g16320 Schrenkiella parvula HOM05D006252 ORTHO05D007909 9.8e-64 247.3 198 67.2
AUR62014977 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.3e-63 246.9 197 71.6
Sopen11g026160 Solanum pennellii HOM05D006252 ORTHO05D007909 1.3e-63 246.9 187 70.6
Migut.D02295 Erythranthe guttata HOM05D006252 ORTHO05D007909 1.7e-63 246.5 198 69.2
TAR633G0073 Trochodendron aralioides HOM05D006252 ORTHO05D007909 2.9e-63 245.7 193 68.4
BcaB05g23061 Brassica carinata HOM05D006252 ORTHO05D007909 3.7e-63 245.4 197 67.5
BcaC09g49661 Brassica carinata HOM05D006252 ORTHO05D007909 3.7e-63 245.4 197 67.5
C01p34110 Brassica napus HOM05D006252 ORTHO05D007909 3.7e-63 245.4 197 67.5
BolC1t03381H Brassica oleracea HOM05D006252 ORTHO05D007909 3.7e-63 245.4 197 67.5
CsaV3_1G013140 Cucumis sativus L. HOM05D006252 ORTHO05D007909 3.7e-63 245.4 194 67.0
Aqoxy1G01090 Aquilegia oxysepala HOM05D006252 ORTHO05D007909 4.9e-63 245.0 195 67.2
CDE08G0788 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 4.9e-63 245.0 159 78.0
MELO3C004995.2 Cucumis melo HOM05D006252 ORTHO05D007909 6.4e-63 244.6 194 67.5
unitig_746.g26615 Utricularia gibba HOM05D006252 ORTHO05D007909 6.4e-63 244.6 163 76.1
GSVIVG01031460001 Vitis vinifera HOM05D006252 ORTHO05D007909 6.4e-63 244.6 161 76.4
CARHR151120 Cardamine hirsuta HOM05D006252 ORTHO05D007909 8.3e-63 244.2 198 66.2
CDE02G0854 Ceratophyllum demersum HOM05D006252 ORTHO05D007909 8.3e-63 244.2 159 77.4
AUR62029150 Chenopodium quinoa HOM05D006252 ORTHO05D007909 1.4e-62 243.4 197 70.6
Nitab4.5_0005665g0020 Nicotiana tabacum HOM05D006252 ORTHO05D007909 1.4e-62 243.4 194 68.0
Peaxi162Scf00983g00015 Petunia axillaris HOM05D006252 ORTHO05D007909 1.4e-62 243.4 191 69.1
A01p26720 Brassica napus HOM05D006252 ORTHO05D007909 1.8e-62 243.0 197 67.0
BraA01t02602Z Brassica rapa HOM05D006252 ORTHO05D007909 1.8e-62 243.0 197 67.0
AT3G44890 Arabidopsis thaliana HOM05D006252 ORTHO05D007909 2.4e-62 242.7 198 65.2
Cfa010288 Carpinus fangiana HOM05D006252 ORTHO05D007909 2.4e-62 242.7 194 66.0
EL10Ac9g22626 Beta vulgaris HOM05D006252 ORTHO05D007909 3.2e-62 242.3 159 79.9
Nn6g35212 Nelumbo nucifera HOM05D006252 ORTHO05D007909 4.1e-62 241.9 196 67.9
MSTRG.18705 Avicennia marina HOM05D006252 ORTHO05D007909 5.4e-62 241.5 197 67.5
TWI79G1340 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 5.4e-62 241.5 195 65.6
Carub.0005s1063 Capsella rubella HOM05D006252 ORTHO05D007909 2.0e-61 239.6 198 64.1
ATR0043G002 Amborella trichopoda HOM05D006252 ORTHO05D007909 2.7e-61 239.2 160 76.9
MBI02_g05768_MAGBIO Magnolia biondii HOM05D006252 ORTHO05D007909 3.5e-61 238.8 148 82.4
PSO063G5667 Papaver somniferum HOM05D006252 ORTHO05D007909 3.5e-61 238.8 195 66.7
Nitab4.5_0000173g0140 Nicotiana tabacum HOM05D006252 ORTHO05D007909 4.6e-61 238.4 186 68.8
Hma1.2p1_0051F.1_g029510 Hydrangea macrophylla HOM05D006252 ORTHO05D007909 1.7e-60 236.5 194 64.4
PSO339G3106 Papaver somniferum HOM05D006252 ORTHO05D007909 1.7e-60 236.5 195 65.6
vmacro14388 Vaccinium macrocarpon HOM05D006252 ORTHO05D007909 1.7e-60 236.5 192 64.6
SalBow6G6884 Salvia bowleyana HOM05D006252 ORTHO05D007909 8.6e-60 234.2 213 62.9
SGA_v2.0_scaffold277G46698 Striga asiatica HOM05D006252 ORTHO05D007909 2.5e-59 232.6 199 64.3
Rhsim01G0210400 Rhododendron simsii HOM05D006252 ORTHO05D007909 3.3e-59 232.3 164 70.1
TWI75G0936 Tripterygium wilfordii HOM05D006252 ORTHO05D007909 5.6e-59 231.5 195 64.6
Hund01525 Selenicereus undatus HOM05D006252 ORTHO05D007909 1.8e-57 226.5 167 70.1
Zm00001eb258190 Zea mays HOM05D006252 ORTHO05D007909 4.0e-57 225.3 160 70.0
Dinv16227 Davidia involucrata HOM05D006252 ORTHO05D007909 3.0e-52 209.1 146 73.3
AagrBONN_evm.TU.Sc2ySwM_362.2261 Anthoceros agrestis HOM05D006252 ORTHO05D007909 2.2e-47 193.0 184 50.5
Mapoly0005s0034 Marchantia polymorpha HOM05D006252 ORTHO05D007909 1.9e-46 189.9 165 55.8
CBR_g36656 Chara braunii HOM05D006252 ORTHO05D007909 3.1e-41 172.6 157 52.9
Pp3c1_5300 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.6e-40 169.5 159 52.2
Pp3c1_5320 Physcomitrium patens HOM05D006252 ORTHO05D007909 2.6e-40 169.5 159 52.2
SMO118G0111 Selaginella moellendorffii HOM05D006252 ORTHO05D007909 2.2e-39 166.4 155 53.5
Pp3c2_34110 Physcomitrium patens HOM05D006252 ORTHO05D007909 3.8e-39 165.6 173 49.1
Haze_24363 Corylus avellana HOM05D006252 ORTHO05D007909 4.9e-39 165.2 105 81.9
Pp3c2_34120 Physcomitrium patens HOM05D006252 ORTHO05D007909 1.9e-38 163.3 194 46.4
Sc21g0000330 Simmondsia chinensis HOM05D006252 ORTHO05D007909 1.2e-37 160.6 142 66.2
arahy.Tifrunner.gnm1.ann1.151HRH Arachis hypogaea HOM05D006252 ORTHO05D007909 6.6e-36 154.8 103 81.6
Oeu007732.1 Olea europaea HOM05D006252 ORTHO05D007909 1.1e-35 154.1 94 84.0
Thhalv10023194m.g Eutrema salsugineum HOM05D006252 ORTHO05D007909 2.1e-34 149.8 102 74.5
arahy.Tifrunner.gnm1.ann1.RBN82M Arachis hypogaea HOM05D006252 ORTHO05D007909 6.9e-33 144.8 103 77.7
Actinidia24149 Actinidia chinensis HOM05D006252 ORTHO05D007909 5.1e-28 128.6 108 64.8
arahy.Tifrunner.gnm1.ann1.EI3IVH Arachis hypogaea HOM05D006252 ORTHO05D007909 4.3e-27 125.6 90 76.7
SEGI_37172 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 6.9e-25 118.2 86 67.4
Cre12.g556050 Chlamydomonas reinhardtii HOM05D006252 ORTHO05D007909 5.8e-24 115.2 156 39.1
arahy.Tifrunner.gnm1.ann1.8D185T Arachis hypogaea HOM05D006252 ORTHO05D005826 3.2e-22 109.4 71 81.7
MCO03G269 Micromonas commoda HOM05D006252 ORTHO05D007909 1.6e-21 107.1 153 38.6
arahy.Tifrunner.gnm1.ann1.KIT0HG Arachis hypogaea HOM05D006252 ORTHO05D007909 6.4e-15 85.1 88 56.8
SEGI_26717 Sequoiadendron giganteum HOM05D006252 ORTHO05D007909 1.4e-14 84.0 107 46.7
Haze_24362 Corylus avellana HOM05D006252 ORTHO05D007909 3.2e-14 82.8 90 46.7
PRCOL_00001763 Prasinoderma coloniale HOM05D006252 ORTHO05D007909 3.2e-14 82.8 163 28.2
Ca_29226_v3 Cicer arietinum L. HOM05D006252 ORTHO05D008725 6.0e-13 78.6 159 35.8
Oeu007731.1 Olea europaea HOM05D006252 ORTHO05D007909 6.0e-13 78.6 94 48.9
arahy.Tifrunner.gnm1.ann1.TR51Z4 Arachis hypogaea HOM05D006252 ORTHO05D007909 4.8e-10 68.9 41 78.0
Zm00001eb258210 Zea mays HOM05D000274 ORTHO05D006772 1.1e-09 67.8 142 34.5
MELO3C029084.2 Cucumis melo HOM05D006252 ORTHO05D007909 2.0e-08 63.5 120 35.0
SMO334G0054 Selaginella moellendorffii HOM05D005275 ORTHO05D006435 1.9e-06 57.0 157 29.3


User provided reference genes

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