Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36752 Trifolium pratense HOM05D007380 ORTHO05D009269 2.6e-74 282.0 143 100.0
Psat1g208920 Pisum sativum HOM05D007380 ORTHO05D009269 9.4e-64 246.9 143 88.1
Medtr2g011720 Medicago truncatula HOM05D007380 ORTHO05D009269 2.1e-63 245.7 143 88.8
Lj6g0018389 Lotus japonicus HOM05D007380 ORTHO05D009269 8.2e-52 207.2 144 77.8
Glyma.15G067000 Glycine max HOM05D007380 ORTHO05D009269 4.1e-51 204.9 144 76.4
Glyma.13G246900 Glycine max HOM05D007380 ORTHO05D009269 7.7e-50 200.7 145 76.6
VMungo0331G1388 Vigna mungo HOM05D007380 ORTHO05D009269 7.2e-48 194.1 143 72.7
Phvul.010G144100 Phaseolus vulgaris HOM05D007380 ORTHO05D009269 4.0e-46 188.3 143 72.0
Lalb_Chr15g0090121 Lupinus albus HOM05D007380 ORTHO05D009269 5.2e-46 188.0 144 70.8
QL05p081084 Quercus lobata HOM05D007380 ORTHO05D009269 3.1e-43 178.7 147 66.0
arahy.Tifrunner.gnm1.ann1.5E52J9 Arachis hypogaea HOM05D007380 ORTHO05D009269 7.0e-43 177.6 150 65.3
arahy.Tifrunner.gnm1.ann1.TYQ19L Arachis hypogaea HOM05D007380 ORTHO05D009269 7.0e-43 177.6 150 65.3
CANSAT54G0392 Cannabis sativa HOM05D007380 ORTHO05D009269 1.6e-42 176.4 153 64.7
Potri.011G041800 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.6e-42 176.4 146 65.8
CiPaw.10G117700 Carya illinoinensis HOM05D007380 ORTHO05D009269 2.7e-42 175.6 147 66.0
Gorai.010G149500 Gossypium raimondii HOM05D007380 ORTHO05D009269 4.5e-42 174.9 149 62.4
GSVIVG01003660001 Vitis vinifera HOM05D007380 ORTHO05D009269 7.7e-42 174.1 146 65.8
Atru.chr10.2021 Acer truncatum HOM05D007380 ORTHO05D009269 1.0e-41 173.7 146 65.1
Ciclev10017095m.g Citrus clementina HOM05D007380 ORTHO05D009269 1.3e-41 173.3 145 62.1
CSS0018060 Camellia sinensis var. sinensis HOM05D007380 ORTHO05D009269 1.7e-41 172.9 147 65.3
Haze_06587 Corylus avellana HOM05D007380 ORTHO05D009269 1.7e-41 172.9 147 66.7
Gohir.D06G127800 Gossypium hirsutum HOM05D007380 ORTHO05D009269 2.3e-41 172.6 149 61.7
Rhsim02G0119200 Rhododendron simsii HOM05D007380 ORTHO05D009269 2.9e-41 172.2 146 63.7
TAR626G0266 Trochodendron aralioides HOM05D007380 ORTHO05D009269 2.9e-41 172.2 147 64.6
Gohir.A06G123100 Gossypium hirsutum HOM05D007380 ORTHO05D009269 8.6e-41 170.6 149 61.7
Cfa000344 Carpinus fangiana HOM05D007380 ORTHO05D009269 3.3e-40 168.7 146 63.0
Actinidia24054 Actinidia chinensis HOM05D007380 ORTHO05D009269 4.2e-40 168.3 138 63.8
Duzib235G0816 Durio zibethinus HOM05D007380 ORTHO05D009269 5.5e-40 167.9 145 61.4
PGSC0003DMG400011277 Solanum tuberosum HOM05D007380 ORTHO05D009269 5.5e-40 167.9 136 64.0
Solyc10g005470.3 Solanum lycopersicum HOM05D007380 ORTHO05D009269 7.2e-40 167.5 136 63.2
Hma1.2p1_1182F.1_g264770 Hydrangea macrophylla HOM05D007380 ORTHO05D009269 9.5e-40 167.2 145 62.1
Potri.004G033400 Populus trichocarpa HOM05D007380 ORTHO05D009269 1.2e-39 166.8 146 63.0
Thecc.06G201000 Theobroma cacao HOM05D007380 ORTHO05D009269 2.8e-39 165.6 88 88.6
unitig_26.g9377 Utricularia gibba HOM05D007380 ORTHO05D009269 2.8e-39 165.6 131 64.9
Peaxi162Scf00371g00913 Petunia axillaris HOM05D007380 ORTHO05D009269 4.7e-39 164.9 120 70.0
Sopen10g001450 Solanum pennellii HOM05D007380 ORTHO05D009269 8.0e-39 164.1 97 83.5
MD05G1326300 Malus domestica HOM05D007380 ORTHO05D009269 1.0e-38 163.7 144 63.2
MBI18_g27684_MAGBIO Magnolia biondii HOM05D007380 ORTHO05D009269 1.8e-38 162.9 143 60.8
Manes.16G019900 Manihot esculenta HOM05D007380 ORTHO05D009269 3.0e-38 162.2 152 61.8
Nitab4.5_0002222g0060 Nicotiana tabacum HOM05D007380 ORTHO05D009269 6.8e-38 161.0 103 77.7
TWI38G1816 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 6.8e-38 161.0 147 60.5
Oeu027967.1 Olea europaea HOM05D007380 ORTHO05D009269 8.9e-38 160.6 121 70.2
PSO210G2614 Papaver somniferum HOM05D007380 ORTHO05D009269 2.0e-37 159.5 153 58.8
Prupe.4G035400 Prunus persica HOM05D007380 ORTHO05D009269 2.0e-37 159.5 148 61.5
PGR042G0893 Punica granatum HOM05D007380 ORTHO05D009269 2.0e-37 159.5 124 67.7
Carub.0007s1978 Capsella rubella HOM05D007380 ORTHO05D009269 2.6e-37 159.1 143 61.5
Sabra04G0019200 Salix brachista HOM05D007380 ORTHO05D009269 2.6e-37 159.1 146 59.6
RcHm_v2.0_Chr5g0006121 Rosa chinensis HOM05D007380 ORTHO05D009269 3.4e-37 158.7 146 60.3
ATR0693G221 Amborella trichopoda HOM05D007380 ORTHO05D009269 4.4e-37 158.3 121 65.3
BolC1t01491H Brassica oleracea HOM05D007380 ORTHO05D009269 5.7e-37 157.9 111 73.0
Lsat_1_v5_gn_7_20660 Lactuca sativa HOM05D007380 ORTHO05D009269 5.7e-37 157.9 137 65.7
BcaNung02797 Brassica carinata HOM05D007380 ORTHO05D009269 9.8e-37 157.1 152 55.3
A03p52790 Brassica napus HOM05D007380 ORTHO05D009269 1.3e-36 156.8 103 74.8
BraA03t14356Z Brassica rapa HOM05D007380 ORTHO05D009269 1.3e-36 156.8 103 74.8
CARHR228120 Cardamine hirsuta HOM05D007380 ORTHO05D009269 1.3e-36 156.8 96 78.1
A01p12760 Brassica napus HOM05D007380 ORTHO05D009269 1.7e-36 156.4 93 79.6
BraA01t01220Z Brassica rapa HOM05D007380 ORTHO05D009269 1.7e-36 156.4 93 79.6
Lsat_1_v5_gn_9_39840 Lactuca sativa HOM05D007380 ORTHO05D009269 1.7e-36 156.4 137 62.0
BcaNung00855 Brassica carinata HOM05D007380 ORTHO05D009269 2.2e-36 156.0 111 72.1
C07p51220 Brassica napus HOM05D007380 ORTHO05D009269 2.2e-36 156.0 111 72.1
BolC7t45622H Brassica oleracea HOM05D007380 ORTHO05D009269 2.2e-36 156.0 111 72.1
C01p15370 Brassica napus HOM05D007380 ORTHO05D009269 2.8e-36 155.6 112 71.4
CsaV3_6G049660 Cucumis sativus L. HOM05D007380 ORTHO05D009269 2.8e-36 155.6 145 60.0
Aa31LG6G3460 Aethionema arabicum HOM05D007380 ORTHO05D009269 3.7e-36 155.2 131 61.1
AL7G32620 Arabidopsis lyrata HOM05D007380 ORTHO05D009269 3.7e-36 155.2 93 78.5
BcaC06g30665 Brassica carinata HOM05D007380 ORTHO05D009269 3.7e-36 155.2 146 57.5
BcaC09g51221 Brassica carinata HOM05D007380 ORTHO05D009269 3.7e-36 155.2 93 79.6
Eucgr.G00569 Eucalyptus grandis HOM05D007380 ORTHO05D009269 3.7e-36 155.2 84 86.9
Thhalv10026468m.g Eutrema salsugineum HOM05D007380 ORTHO05D009269 3.7e-36 155.2 93 78.5
TWI63G1146 Tripterygium wilfordii HOM05D007380 ORTHO05D009269 3.7e-36 155.2 143 60.1
MELO3C007327.2 Cucumis melo HOM05D007380 ORTHO05D009269 6.3e-36 154.5 150 58.7
AT4G21445 Arabidopsis thaliana HOM05D007380 ORTHO05D009269 8.3e-36 154.1 93 78.5
Cc00_g03040 Coffea canephora HOM05D007380 ORTHO05D009269 8.3e-36 154.1 85 85.9
Aqoxy1G03898 Aquilegia oxysepala HOM05D004171 ORTHO05D004983 2.4e-35 152.5 121 66.9
Sed0001213 Sechium edule HOM05D007380 ORTHO05D009269 3.1e-35 152.1 147 57.8
Ah.14g088860 Amaranthus hybridus HOM05D007380 ORTHO05D009269 7.0e-35 151.0 86 82.6
FvH4_3g03870 Fragaria vesca HOM05D007380 ORTHO05D009269 7.0e-35 151.0 149 61.1
FAN21G2116 Fragaria x ananassa HOM05D007380 ORTHO05D009269 7.0e-35 151.0 149 60.4
Sp7g19570 Schrenkiella parvula HOM05D007380 ORTHO05D009269 7.0e-35 151.0 143 58.0
AUR62012486 Chenopodium quinoa HOM05D007380 ORTHO05D009269 9.2e-35 150.6 86 81.4
THA.LOC104812675 Tarenaya hassleriana HOM05D007380 ORTHO05D009269 9.2e-35 150.6 97 74.2
ClCG00G003830 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.6e-34 149.8 153 57.5
ClCG01G022490 Citrullus lanatus HOM05D007380 ORTHO05D009269 1.6e-34 149.8 153 57.5
HanXRQChr05g0131131 Helianthus annuus HOM05D007380 ORTHO05D009269 2.0e-34 149.4 84 86.9
AUR62014709 Chenopodium quinoa HOM05D007380 ORTHO05D009269 2.7e-34 149.1 148 54.7
CDE04G1327 Ceratophyllum demersum HOM05D007380 ORTHO05D009269 4.5e-34 148.3 98 77.6
Os04g0635700 Oryza sativa ssp. japonica HOM05D007380 ORTHO05D009269 4.5e-34 148.3 85 85.9
Zm00001eb413340 Zea mays HOM05D007380 ORTHO05D009269 4.5e-34 148.3 82 87.8
ECA236G0685 Erigeron canadensis HOM05D007380 ORTHO05D009269 5.9e-34 147.9 128 62.5
EL10Ac8g20541 Beta vulgaris HOM05D007380 ORTHO05D009269 1.7e-33 146.4 97 72.2
FAN25G1236 Fragaria x ananassa HOM05D007380 ORTHO05D009269 1.8e-30 136.3 103 67.0
DCAR_024159 Daucus carota HOM05D007380 ORTHO05D009269 6.8e-30 134.4 74 83.8
Lj2P279T21 Lonicera japonica HOM05D007380 ORTHO05D009269 1.7e-28 129.8 71 85.9
Nitab4.5_0001007g0090 Nicotiana tabacum HOM05D007380 ORTHO05D009269 4.1e-27 125.2 101 65.3
SEGI_03473 Sequoiadendron giganteum HOM05D007380 ORTHO05D009269 4.1e-27 125.2 88 68.2
Actinidia11813 Actinidia chinensis HOM05D007380 ORTHO05D009269 7.0e-27 124.4 124 56.5
Pp3c5_24580 Physcomitrium patens HOM05D007380 ORTHO05D009269 7.0e-27 124.4 80 68.8
Mapoly0097s0056 Marchantia polymorpha HOM05D007380 ORTHO05D009269 7.8e-26 120.9 101 57.4
AagrBONN_evm.TU.Sc2ySwM_228.835 Anthoceros agrestis HOM05D007380 ORTHO05D009269 7.3e-24 114.4 93 60.2
CBR_g3310 Chara braunii HOM05D007380 ORTHO05D009269 1.1e-22 110.5 84 64.3
SMO117G0257 Selaginella moellendorffii HOM05D007380 ORTHO05D009269 3.4e-21 105.5 79 63.3
FAN11G1927 Fragaria x ananassa HOM05D007380 ORTHO05D009269 9.2e-19 97.4 51 86.3
PSO832G0352 Papaver somniferum HOM05D007380 ORTHO05D009269 1.2e-18 97.1 109 53.2
MD10G1304300 Malus domestica HOM05D007380 ORTHO05D009269 9.5e-16 87.4 68 72.1
FvH4_3g03820 Fragaria vesca HOM05D007380 ORTHO05D009269 2.9e-12 75.9 45 84.4
BcaNung00854 Brassica carinata HOM05D007380 ORTHO05D009269 5.2e-06 55.1 57 54.4


User provided reference genes

Program Settings