Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36687 Trifolium pratense HOM05D000963 ORTHO05D010073 3.8e-66 254.6 122 100.0
arahy.Tifrunner.gnm1.ann1.3JL12K Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
arahy.Tifrunner.gnm1.ann1.9ZA4TL Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
arahy.Tifrunner.gnm1.ann1.AKG7GD Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
arahy.Tifrunner.gnm1.ann1.BP3EV9 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
arahy.Tifrunner.gnm1.ann1.LW54SX Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
arahy.Tifrunner.gnm1.ann1.MCAP06 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
arahy.Tifrunner.gnm1.ann1.V5YKW3 Arachis hypogaea HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
Lsat_1_v5_gn_0_47661 Lactuca sativa HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
Lsat_1_v5_gn_2_97101 Lactuca sativa HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
Lsat_1_v5_gn_6_94240 Lactuca sativa HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
Lsat_1_v5_gn_8_139860 Lactuca sativa HOM05D000963 ORTHO05D010073 1.7e-18 96.3 58 75.9
Actinidia28233 Actinidia chinensis HOM05D000963 ORTHO05D010073 3.0e-18 95.5 50 86.0
arahy.Tifrunner.gnm1.ann1.IG3D37 Arachis hypogaea HOM05D000963 ORTHO05D010073 4.3e-17 91.7 58 72.4
Sopen05g013060 Solanum pennellii HOM05D000004 ORTHO05D000002 1.3e-16 90.1 50 80.0
CSS0020252 Camellia sinensis var. sinensis HOM05D000963 ORTHO05D013225 8.1e-16 87.4 47 87.2
ClCG04G002950 Citrullus lanatus HOM05D000963 ORTHO05D010073 2.0e-14 82.8 44 84.1
FAN01G1778 Fragaria x ananassa HOM05D000963 ORTHO05D010073 7.6e-14 80.9 50 76.0
Sc21g0003830 Simmondsia chinensis HOM05D000963 ORTHO05D013492 9.9e-14 80.5 43 83.7
Nitab4.5_0007400g0110 Nicotiana tabacum HOM05D000963 ORTHO05D010073 2.1e-11 72.8 52 67.3
Sopen10g016580 Solanum pennellii HOM05D000963 ORTHO05D010073 6.0e-11 71.2 43 74.4
DCAR_001521 Daucus carota HOM05D000963 ORTHO05D010073 2.3e-10 69.3 34 85.3
Psat3g011600 Pisum sativum HOM05D000963 ORTHO05D010073 3.7e-08 62.0 34 73.5
TPR.G27285 Trifolium pratense HOM05D000121 ORTHO05D000102 6.2e-08 61.2 30 90.0
Psat3g176880 Pisum sativum HOM05D000121 ORTHO05D000102 1.4e-07 60.1 30 90.0
TPR.G36658 Trifolium pratense HOM05D000121 ORTHO05D000102 1.8e-07 59.7 30 86.7
Psat0s1933g0080 Pisum sativum HOM05D000121 ORTHO05D000102 4.0e-07 58.5 30 83.3
TPR.G36641 Trifolium pratense HOM05D000121 ORTHO05D000102 5.3e-07 58.2 30 86.7
Medtr6g034230 Medicago truncatula HOM05D000121 ORTHO05D000102 9.0e-07 57.4 30 83.3
Medtr6g034310 Medicago truncatula HOM05D000121 ORTHO05D000102 9.0e-07 57.4 30 83.3
PSO170G4765 Papaver somniferum HOM05D000121 ORTHO05D000102 9.0e-07 57.4 29 86.2
Medtr8g042520 Medicago truncatula HOM05D000121 ORTHO05D000102 1.5e-06 56.6 30 83.3
Ca_10695_v3 Cicer arietinum L. HOM05D000121 ORTHO05D000102 2.6e-06 55.8 30 83.3
Lj2g0010856 Lotus japonicus HOM05D000121 ORTHO05D000102 2.6e-06 55.8 30 80.0
Medtr6g034265 Medicago truncatula HOM05D000121 ORTHO05D000102 2.6e-06 55.8 30 80.0
arahy.Tifrunner.gnm1.ann1.L8KA6F Arachis hypogaea HOM05D000963 ORTHO05D010073 3.4e-06 55.5 29 79.3
TPR.G36629 Trifolium pratense HOM05D000121 ORTHO05D000102 4.5e-06 55.1 30 80.0
CANSAT21G1565 Cannabis sativa HOM05D000121 ORTHO05D000102 5.8e-06 54.7 30 80.0
Medtr1g099280 Medicago truncatula HOM05D000121 ORTHO05D000102 5.8e-06 54.7 30 80.0
Psat6g194440 Pisum sativum HOM05D000121 ORTHO05D000102 5.8e-06 54.7 30 83.3
PGSC0003DMG400028893 Solanum tuberosum HOM05D000121 ORTHO05D000102 5.8e-06 54.7 29 82.8
arahy.Tifrunner.gnm1.ann1.GL9Q07 Arachis hypogaea HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
arahy.Tifrunner.gnm1.ann1.ZC6WS5 Arachis hypogaea HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
Glyma.10G227400 Glycine max HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
Glyma.20G165000 Glycine max HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
Lalb_Chr21g0305381 Lupinus albus HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
Medtr0196s0020 Medicago truncatula HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
Medtr6g034220 Medicago truncatula HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 76.7
Phvul.007G078000 Phaseolus vulgaris HOM05D000121 ORTHO05D000102 7.6e-06 54.3 30 80.0
Aa31LG10G13590 Aethionema arabicum HOM05D000121 ORTHO05D000102 1.0e-05 53.9 30 76.7
AUR62029945 Chenopodium quinoa HOM05D000121 ORTHO05D000102 1.0e-05 53.9 30 76.7
AUR62033756 Chenopodium quinoa HOM05D000121 ORTHO05D000102 1.0e-05 53.9 30 76.7


User provided reference genes

Program Settings