Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 4.1e-75 284.6 143 100.0
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 8.3e-44 180.6 108 85.2
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 4.7e-39 164.9 101 83.2
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.0e-38 163.7 104 79.8
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 1.0e-38 163.7 97 83.5
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 1.4e-38 163.3 110 77.3
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.8e-38 162.9 101 81.2
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 5.2e-38 161.4 99 81.8
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 8.9e-38 160.6 99 80.8
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 2.0e-37 159.5 120 69.2
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 9.8e-37 157.1 101 79.2
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 1.3e-36 156.8 97 81.4
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 6.3e-36 154.5 113 69.0
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.2e-34 150.2 125 61.6
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 1.2e-34 150.2 99 75.8
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.7e-34 149.1 121 62.8
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 3.5e-34 148.7 104 70.2
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 3.5e-34 148.7 104 70.2
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 4.5e-34 148.3 120 64.2
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 5.9e-34 147.9 120 64.2
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 5.9e-34 147.9 125 60.8
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 7.8e-34 147.5 120 63.3
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 1.0e-33 147.1 125 60.8
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 2.9e-33 145.6 101 73.3
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 3.8e-33 145.2 121 64.5
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 5.0e-33 144.8 99 70.7
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 8.6e-33 144.1 117 62.4
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 8.6e-33 144.1 117 62.4
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.5e-32 143.3 123 56.9
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.9e-32 142.9 120 60.8
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 3.3e-32 142.1 103 67.0
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 5.6e-32 141.4 97 69.1
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 9.5e-32 140.6 97 68.0
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 9.5e-32 140.6 120 60.8
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 9.5e-32 140.6 104 65.4
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 1.2e-31 140.2 116 61.2
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 1.2e-31 140.2 103 66.0
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 1.6e-31 139.8 94 73.4
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 1.6e-31 139.8 97 68.0
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 1.6e-31 139.8 125 59.2
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 1.6e-31 139.8 104 67.3
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 2.8e-31 139.0 118 58.5
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 2.8e-31 139.0 119 61.3
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 2.8e-31 139.0 119 61.3
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 2.8e-31 139.0 118 59.3
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 2.8e-31 139.0 99 69.7
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 2.8e-31 139.0 104 66.3
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.8e-31 139.0 103 68.0
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 2.8e-31 139.0 103 68.0
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 3.6e-31 138.7 104 68.3
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 3.6e-31 138.7 144 56.2
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 4.7e-31 138.3 108 66.7
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 4.7e-31 138.3 117 59.8
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 8.0e-31 137.5 106 65.1
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 8.0e-31 137.5 116 62.1
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 1.0e-30 137.1 101 66.3
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.0e-30 137.1 94 71.3
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 1.4e-30 136.7 116 62.1
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 1.4e-30 136.7 103 66.0
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 1.8e-30 136.3 99 65.7
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 2.3e-30 136.0 94 67.0
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 2.3e-30 136.0 105 64.8
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 3.0e-30 135.6 103 63.1
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 3.0e-30 135.6 104 63.5
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 5.2e-30 134.8 106 62.3
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 5.2e-30 134.8 119 58.8
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 6.8e-30 134.4 104 63.5
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 6.8e-30 134.4 94 68.1
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 8.9e-30 134.0 94 66.0
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 1.2e-29 133.7 94 69.1
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 2.6e-29 132.5 146 52.1
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 2.6e-29 132.5 104 65.4
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 5.8e-29 131.3 99 68.7
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 5.8e-29 131.3 99 68.7
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 5.8e-29 131.3 101 65.3
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 5.8e-29 131.3 97 63.9
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 9.8e-29 130.6 99 66.7
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 1.3e-28 130.2 119 58.0
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 1.3e-28 130.2 94 63.8
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.7e-28 129.8 105 60.0
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 1.7e-28 129.8 106 60.4
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.7e-28 129.8 113 61.1
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.7e-28 129.8 113 61.1
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 1.7e-28 129.8 104 62.5
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 1.7e-28 129.8 141 51.1
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 2.2e-28 129.4 117 58.1
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 2.2e-28 129.4 99 67.7
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 2.2e-28 129.4 99 63.6
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 2.9e-28 129.0 113 59.3
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.4e-27 126.7 93 66.7
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 1.8e-27 126.3 121 52.1
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 2.4e-27 125.9 99 63.6
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 4.1e-27 125.2 106 61.3
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 4.1e-27 125.2 101 63.4
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 5.4e-27 124.8 105 60.0
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 5.4e-27 124.8 123 52.8
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 9.2e-27 124.0 97 60.8
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.0e-26 122.9 103 58.3
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.3e-25 120.2 113 58.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 2.3e-25 119.4 104 61.5
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.3e-25 119.4 99 55.6
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 5.0e-25 118.2 123 51.2
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 8.3e-20 100.9 95 55.8
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 8.3e-20 100.9 84 57.1
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 3.2e-19 99.0 74 60.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 7.8e-18 94.4 105 41.9
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.3e-17 93.6 120 41.7
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 1.3e-17 93.6 105 42.9
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 3.9e-17 92.0 58 82.8
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 2.1e-15 86.3 100 42.0
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 4.7e-15 85.1 96 42.7
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 5.8e-13 78.2 59 64.4
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 4.6e-10 68.6 67 50.7
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 3.3e-08 62.4 58 56.9


User provided reference genes

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