Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36685 Trifolium pratense HOM05D006489 ORTHO05D007556 3.5e-297 1024.2 532 100.0
Medtr6g033325 Medicago truncatula HOM05D006489 ORTHO05D007556 1.1e-197 693.7 567 69.5
Psat1g097920 Pisum sativum HOM05D006489 ORTHO05D007556 1.9e-173 613.2 638 58.3
TPR.G1166 Trifolium pratense HOM05D006489 ORTHO05D007556 1.8e-144 516.9 575 57.0
Ca_06317_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 2.9e-142 509.6 575 57.4
Medtr5g092580 Medicago truncatula HOM05D006489 ORTHO05D007556 1.1e-133 481.1 606 53.1
Ca_25386_v3 Cicer arietinum L. HOM05D006489 ORTHO05D007556 7.6e-127 458.4 571 54.6
Psat2g011040 Pisum sativum HOM05D006489 ORTHO05D007556 3.9e-115 419.5 583 49.9
LjContig00272g0011286 Lotus japonicus HOM05D006489 ORTHO05D007556 6.5e-110 402.1 577 47.7
VMungo0647G1504 Vigna mungo HOM05D006489 ORTHO05D007556 3.1e-104 383.3 576 46.9
Glyma.02G290600 Glycine max HOM05D006489 ORTHO05D007556 2.6e-98 363.6 572 45.8
Phvul.008G267300 Phaseolus vulgaris HOM05D006489 ORTHO05D007556 2.6e-98 363.6 578 44.3
Lalb_Chr17g0348451 Lupinus albus HOM05D006489 ORTHO05D007556 1.7e-94 350.9 627 43.4
arahy.Tifrunner.gnm1.ann1.I0Q6ZZ Arachis hypogaea HOM05D006489 ORTHO05D007556 9.8e-82 308.5 623 37.4
Lalb_Chr10g0106941 Lupinus albus HOM05D006489 ORTHO05D007556 1.0e-78 298.5 607 37.7
arahy.Tifrunner.gnm1.ann1.X6VDEX Arachis hypogaea HOM05D006489 ORTHO05D007556 2.8e-76 290.4 633 37.4
Haze_09673 Corylus avellana HOM05D006489 ORTHO05D007556 4.0e-75 286.6 596 39.6
QL08p010454 Quercus lobata HOM05D006489 ORTHO05D007556 9.2e-72 275.4 572 39.7
Ciclev10008166m.g Citrus clementina HOM05D006489 ORTHO05D007556 2.3e-67 260.8 584 35.1
Glyma.14G024100 Glycine max HOM05D006489 ORTHO05D007556 3.1e-67 260.4 404 44.3
Cfa020351 Carpinus fangiana HOM05D006489 ORTHO05D007556 2.0e-66 257.7 629 36.6
CiPaw.12G129400 Carya illinoinensis HOM05D006489 ORTHO05D007556 3.4e-66 256.9 588 37.4
Cpa.g.sc97.9 Carica papaya HOM05D006489 ORTHO05D007556 4.6e-63 246.5 573 36.0
Duzib213G0414 Durio zibethinus HOM05D006489 ORTHO05D007556 3.3e-61 240.4 574 35.5
Sabra11G0125100 Salix brachista HOM05D006489 ORTHO05D007556 3.1e-59 233.8 579 34.2
TAR627G0165 Trochodendron aralioides HOM05D006489 ORTHO05D007556 8.9e-59 232.3 581 33.7
Prupe.4G212300 Prunus persica HOM05D006489 ORTHO05D007556 9.8e-58 228.8 590 35.1
Actinidia35341 Actinidia chinensis HOM05D006489 ORTHO05D007556 2.2e-57 227.6 565 33.8
vmacro09717 Vaccinium macrocarpon HOM05D006489 ORTHO05D007556 1.1e-56 225.3 558 33.3
Dinv22265 Davidia involucrata HOM05D006489 ORTHO05D007556 4.1e-56 223.4 556 34.7
COL.COLO4_19762 Corchorus olitorius HOM05D006489 ORTHO05D007556 2.1e-55 221.1 500 35.4
Gorai.004G027700 Gossypium raimondii HOM05D006489 ORTHO05D007556 1.9e-53 214.5 559 32.0
Potri.011G139200 Populus trichocarpa HOM05D006489 ORTHO05D007556 5.6e-53 213.0 587 32.4
Gohir.D08G030200 Gossypium hirsutum HOM05D006489 ORTHO05D007556 1.2e-52 211.8 559 32.0
Peaxi162Scf00964g00023 Petunia axillaris HOM05D006489 ORTHO05D007556 5.2e-51 206.5 553 34.9
TWI15G0832 Tripterygium wilfordii HOM05D006489 ORTHO05D007556 5.2e-51 206.5 577 32.1
Hma1.2p1_1162F.1_g262610 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 1.5e-50 204.9 572 35.0
Aa31LG8G7280 Aethionema arabicum HOM05D006489 ORTHO05D007556 2.9e-49 200.7 561 31.4
Manes.03G129000 Manihot esculenta HOM05D006489 ORTHO05D007556 4.9e-49 199.9 600 33.2
MELO3C013233.2 Cucumis melo HOM05D006489 ORTHO05D007556 3.2e-48 197.2 582 32.1
Aqoxy1G03602 Aquilegia oxysepala HOM05D006489 ORTHO05D007556 1.2e-47 195.3 571 31.3
CARHR096250 Cardamine hirsuta HOM05D006489 ORTHO05D007556 1.6e-47 194.9 560 33.9
Oeu062694.1 Olea europaea HOM05D006489 ORTHO05D007556 1.6e-47 194.9 494 34.8
Gohir.A08G019600 Gossypium hirsutum HOM05D006489 ORTHO05D007556 2.1e-47 194.5 557 31.8
BcaB06g27045 Brassica carinata HOM05D006489 ORTHO05D007556 3.5e-47 193.7 540 31.3
Cc09_g09720 Coffea canephora HOM05D006489 ORTHO05D007556 3.5e-47 193.7 563 33.4
AT3G20490 Arabidopsis thaliana HOM05D006489 ORTHO05D007556 7.8e-47 192.6 559 31.8
A04p10340 Brassica napus HOM05D006489 ORTHO05D007556 1.0e-46 192.2 582 30.9
AL3G34270 Arabidopsis lyrata HOM05D006489 ORTHO05D007556 1.3e-46 191.8 548 32.5
BcaC02g09533 Brassica carinata HOM05D006489 ORTHO05D007556 1.7e-46 191.4 575 30.6
C04p43850 Brassica napus HOM05D006489 ORTHO05D007556 1.7e-46 191.4 575 30.8
BolC4t25966H Brassica oleracea HOM05D006489 ORTHO05D007556 1.7e-46 191.4 575 30.6
Lsat_1_v5_gn_9_94040 Lactuca sativa HOM05D006489 ORTHO05D007556 3.0e-46 190.7 560 32.0
MBI02_g07154_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 5.1e-46 189.9 549 32.2
Atru.chr2.3342 Acer truncatum HOM05D006489 ORTHO05D007556 1.1e-45 188.7 404 35.4
BraA04t16706Z Brassica rapa HOM05D006489 ORTHO05D007556 1.1e-45 188.7 539 30.8
CANSAT11G2482 Cannabis sativa HOM05D006489 ORTHO05D007556 1.5e-45 188.3 622 30.7
Carub.0003s2045 Capsella rubella HOM05D006489 ORTHO05D007556 1.5e-45 188.3 542 31.9
DCAR_022559 Daucus carota HOM05D006489 ORTHO05D007556 1.5e-45 188.3 566 33.6
ECA240G0124 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.9e-45 188.0 570 33.2
CSS0036232 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.5e-45 187.6 497 35.4
Sed0018772 Sechium edule HOM05D006489 ORTHO05D007556 2.5e-45 187.6 602 31.9
HanXRQChr03g0076541 Helianthus annuus HOM05D006489 ORTHO05D007556 1.6e-44 184.9 560 33.4
CSS0017234 Camellia sinensis var. sinensis HOM05D006489 ORTHO05D007556 2.1e-44 184.5 497 35.2
RhsimUnG0250900 Rhododendron simsii HOM05D006489 ORTHO05D007556 2.1e-44 184.5 455 34.3
THA.LOC104817868 Tarenaya hassleriana HOM05D006489 ORTHO05D007556 2.1e-44 184.5 538 31.8
FAN25G3282 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.8e-44 184.1 487 34.1
HanXRQChr08g0220561 Helianthus annuus HOM05D006489 ORTHO05D007556 8.1e-44 182.6 565 32.6
ClCG05G014300 Citrullus lanatus HOM05D006489 ORTHO05D007556 1.1e-43 182.2 578 30.6
MD03G1201600 Malus domestica HOM05D006489 ORTHO05D007556 3.1e-43 180.6 585 32.8
RcHm_v2.0_Chr5g0039401 Rosa chinensis HOM05D006489 ORTHO05D007556 8.9e-43 179.1 515 33.4
CDE02G1695 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 3.4e-42 177.2 549 31.3
PGSC0003DMG400022321 Solanum tuberosum HOM05D006489 ORTHO05D007556 2.2e-41 174.5 574 33.3
MBI18_g45561_MAGBIO Magnolia biondii HOM05D006489 ORTHO05D007556 2.9e-41 174.1 576 30.2
Migut.M01768 Erythranthe guttata HOM05D006489 ORTHO05D007556 2.4e-40 171.0 515 34.0
Solyc07g064570.3 Solanum lycopersicum HOM05D006489 ORTHO05D007556 2.4e-40 171.0 569 34.1
Atru.BG.151.p Acer truncatum HOM05D006489 ORTHO05D007556 7.1e-40 169.5 439 32.3
FvH4_3g22630 Fragaria vesca HOM05D006489 ORTHO05D007556 7.1e-40 169.5 509 33.2
CAN.G337.129 Capsicum annuum HOM05D006489 ORTHO05D007556 9.3e-40 169.1 494 33.2
EL10Ac4g07823 Beta vulgaris HOM05D006489 ORTHO05D007556 1.6e-39 168.3 579 29.5
FAN21G0022 Fragaria x ananassa HOM05D006489 ORTHO05D007556 2.1e-39 167.9 511 32.7
Sopen07g032750 Solanum pennellii HOM05D006489 ORTHO05D007556 6.0e-39 166.4 573 33.9
AUR62015766 Chenopodium quinoa HOM05D006489 ORTHO05D007556 3.0e-38 164.1 590 29.5
SGA_v2.0_scaffold80G25948 Striga asiatica HOM05D006489 ORTHO05D007556 8.7e-38 162.5 490 33.1
CDE05G3553 Ceratophyllum demersum HOM05D006489 ORTHO05D007556 1.5e-37 161.8 547 29.4
Sc03g0008610 Simmondsia chinensis HOM05D006489 ORTHO05D007556 1.5e-37 161.8 441 31.3
ATR0752G219 Amborella trichopoda HOM05D006489 ORTHO05D007556 4.3e-37 160.2 549 29.1
Nitab4.5_0001913g0140 Nicotiana tabacum HOM05D006489 ORTHO05D007556 4.3e-37 160.2 516 32.9
Hma1.2p1_1162F.1_g262600 Hydrangea macrophylla HOM05D006489 ORTHO05D007556 5.6e-37 159.8 511 32.3
PGR083G1541 Punica granatum HOM05D006489 ORTHO05D007556 5.6e-37 159.8 540 31.1
Lj1A872T56 Lonicera japonica HOM05D006489 ORTHO05D007556 7.3e-37 159.5 408 32.8
Nitab4.5_0011175g0010 Nicotiana tabacum HOM05D006489 ORTHO05D007556 3.6e-36 157.1 523 31.7
Eucgr.F00766 Eucalyptus grandis HOM05D006489 ORTHO05D007556 1.8e-35 154.8 430 31.4
Thecc.07G037900 Theobroma cacao HOM05D006489 ORTHO05D007556 1.2e-34 152.1 418 32.5
GSVIVG01037644001 Vitis vinifera HOM05D006489 ORTHO05D007556 1.2e-34 152.1 558 30.5
Hund23251 Selenicereus undatus HOM05D006489 ORTHO05D007556 2.0e-34 151.4 507 30.4
CsaV3_7G021220 Cucumis sativus L. HOM05D006489 ORTHO05D007556 2.9e-33 147.5 546 28.9
Nn1g03547 Nelumbo nucifera HOM05D006489 ORTHO05D007556 1.1e-32 145.6 520 29.4
HPP92_013323 Vanilla planifolia HOM05D006489 ORTHO05D007556 7.1e-32 142.9 575 28.0
Sp7g05570 Schrenkiella parvula HOM05D006489 ORTHO05D007556 1.0e-30 139.0 641 27.6
Sed0021471 Sechium edule HOM05D006489 ORTHO05D007556 1.3e-30 138.7 483 28.8
PSO675G7358 Papaver somniferum HOM05D006489 ORTHO05D007556 1.5e-29 135.2 349 31.8
Thhalv10028177m.g Eutrema salsugineum HOM05D006489 ORTHO05D007556 2.1e-28 131.3 530 27.5
AUR62020449 Chenopodium quinoa HOM05D006489 ORTHO05D007556 2.2e-25 121.3 562 27.4
FAN16G1490 Fragaria x ananassa HOM05D006489 ORTHO05D007556 4.9e-25 120.2 242 38.8
HanXRQChr11g0337701 Helianthus annuus HOM05D006489 ORTHO05D007556 7.1e-24 116.3 204 41.2
Psat0s2568g0040 Pisum sativum HOM05D006489 ORTHO05D007556 1.6e-23 115.2 77 75.3
Lsat_1_v5_gn_7_108561 Lactuca sativa HOM05D006489 ORTHO05D007556 7.9e-23 112.8 188 44.1
ECA236G1547 Erigeron canadensis HOM05D006489 ORTHO05D007556 1.6e-20 105.1 225 36.9
Zm00001eb431300 Zea mays HOM05D006489 ORTHO05D007556 2.1e-20 104.8 563 25.4
SEGI_05401 Sequoiadendron giganteum HOM05D006489 ORTHO05D007556 4.8e-20 103.6 581 27.7
Os04g0625100 Oryza sativa ssp. japonica HOM05D006489 ORTHO05D007556 6.2e-20 103.2 525 26.1
unitig_62.g23281 Utricularia gibba HOM05D008272 ORTHO05D010429 3.1e-19 100.9 518 28.2
PSO541G0970 Papaver somniferum HOM05D006489 ORTHO05D007556 5.8e-18 96.7 320 28.4
Actinidia10733 Actinidia chinensis HOM05D006489 ORTHO05D007556 4.8e-12 77.0 222 31.5
Lj8A169G92 Lonicera japonica HOM05D006489 ORTHO05D007556 6.9e-11 73.2 68 54.4


User provided reference genes

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