Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36620 Trifolium pratense HOM05D007154 ORTHO05D008945 6.4e-76 287.3 146 100.0
Ca_23384_v3 Cicer arietinum L. HOM05D007154 ORTHO05D008945 3.1e-54 215.3 142 76.8
Medtr8g020800 Medicago truncatula HOM05D007154 ORTHO05D008945 2.1e-50 202.6 145 73.1
Psat4g220160 Pisum sativum HOM05D007154 ORTHO05D008945 3.5e-50 201.8 147 71.4
Lj3g0022846 Lotus japonicus HOM05D007154 ORTHO05D008945 3.0e-49 198.7 140 70.7
Glyma.07G039300 Glycine max HOM05D007154 ORTHO05D008945 2.5e-48 195.7 144 68.8
VMungo0331G0746 Vigna mungo HOM05D007154 ORTHO05D008945 1.3e-47 193.4 142 66.9
Lalb_Chr01g0013651 Lupinus albus HOM05D007154 ORTHO05D008945 5.3e-46 188.0 145 64.8
Potri.010G254600 Populus trichocarpa HOM05D007154 ORTHO05D008945 7.1e-43 177.6 143 63.6
Dinv01916 Davidia involucrata HOM05D007154 ORTHO05D008945 2.7e-42 175.6 153 60.1
Sabra10G0198000 Salix brachista HOM05D007154 ORTHO05D008945 1.0e-41 173.7 143 62.2
Cfa018670 Carpinus fangiana HOM05D007154 ORTHO05D008945 1.3e-41 173.3 153 60.8
Phvul.010G129500 Phaseolus vulgaris HOM05D007154 ORTHO05D008945 2.3e-41 172.6 143 62.2
arahy.Tifrunner.gnm1.ann1.408I3G Arachis hypogaea HOM05D007154 ORTHO05D008945 3.9e-41 171.8 117 68.4
Manes.04G160900 Manihot esculenta HOM05D007154 ORTHO05D008945 3.9e-41 171.8 146 58.9
Sed0008143 Sechium edule HOM05D007154 ORTHO05D008945 5.7e-40 167.9 152 57.2
arahy.Tifrunner.gnm1.ann1.JHQS48 Arachis hypogaea HOM05D007154 ORTHO05D008945 1.3e-39 166.8 117 66.7
EL10Ac2g04490 Beta vulgaris HOM05D007154 ORTHO05D008945 1.3e-39 166.8 142 57.0
Atru.chr11.40 Acer truncatum HOM05D007154 ORTHO05D008945 1.6e-39 166.4 147 60.5
MELO3C005082.2 Cucumis melo HOM05D007154 ORTHO05D008945 2.8e-39 165.6 155 55.5
Gorai.012G136600 Gossypium raimondii HOM05D007154 ORTHO05D008945 2.8e-39 165.6 144 55.6
TWI53G1167 Tripterygium wilfordii HOM05D007154 ORTHO05D008945 6.3e-39 164.5 145 57.2
CSS0036440 Camellia sinensis var. sinensis HOM05D007154 ORTHO05D008945 8.2e-39 164.1 127 60.6
ClCG01G007940 Citrullus lanatus HOM05D007154 ORTHO05D008945 1.1e-38 163.7 155 54.8
Ciclev10016869m.g Citrus clementina HOM05D007154 ORTHO05D008945 3.1e-38 162.2 148 57.4
CsaV3_5G021910 Cucumis sativus L. HOM05D007154 ORTHO05D008945 3.1e-38 162.2 155 54.2
TAR371G0017 Trochodendron aralioides HOM05D007154 ORTHO05D008945 3.1e-38 162.2 139 57.6
Thecc.02G152200 Theobroma cacao HOM05D007154 ORTHO05D008945 5.3e-38 161.4 147 53.7
DCAR_030346 Daucus carota HOM05D007154 ORTHO05D008945 1.5e-37 159.8 150 56.0
Actinidia04367 Actinidia chinensis HOM05D007154 ORTHO05D008945 2.6e-37 159.1 152 53.3
CANSAT78G1733 Cannabis sativa HOM05D007154 ORTHO05D008945 2.6e-37 159.1 157 54.8
Gohir.D04G150000 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.6e-37 159.1 144 55.6
GSVIVG01034352001 Vitis vinifera HOM05D007154 ORTHO05D008945 3.4e-37 158.7 148 55.4
Aqoxy3G04335 Aquilegia oxysepala HOM05D007154 ORTHO05D008945 5.9e-37 157.9 149 56.4
Eucgr.G02613 Eucalyptus grandis HOM05D007154 ORTHO05D008945 5.9e-37 157.9 151 57.0
FAN17G3039 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.0e-36 157.1 143 55.9
FAN07G0022 Fragaria x ananassa HOM05D007154 ORTHO05D008945 1.3e-36 156.8 117 62.4
Peaxi162Scf00329g00212 Petunia axillaris HOM05D007154 ORTHO05D008945 1.3e-36 156.8 157 53.5
AUR62023198 Chenopodium quinoa HOM05D007154 ORTHO05D008945 1.7e-36 156.4 136 55.9
QL01p000323 Quercus lobata HOM05D007154 ORTHO05D008945 2.2e-36 156.0 149 57.0
Gohir.A04G109800 Gossypium hirsutum HOM05D007154 ORTHO05D008945 2.9e-36 155.6 143 55.9
PGSC0003DMG400025308 Solanum tuberosum HOM05D007154 ORTHO05D008945 2.9e-36 155.6 151 55.6
RcHm_v2.0_Chr4g0447181 Rosa chinensis HOM05D007154 ORTHO05D008945 3.8e-36 155.2 144 54.9
CAN.G419.16 Capsicum annuum HOM05D007154 ORTHO05D008945 5.0e-36 154.8 160 54.4
AUR62023245 Chenopodium quinoa HOM05D007154 ORTHO05D008945 8.5e-36 154.1 136 55.1
Nn3g18537 Nelumbo nucifera HOM05D007154 ORTHO05D008945 1.1e-35 153.7 121 59.5
SalBow4G2238 Salvia bowleyana HOM05D007154 ORTHO05D008945 1.1e-35 153.7 150 54.7
PGR142G2984 Punica granatum HOM05D007154 ORTHO05D008945 1.4e-35 153.3 120 59.2
COL.COLO4_33150 Corchorus olitorius HOM05D007154 ORTHO05D008945 3.2e-35 152.1 145 54.5
MD13G1001100 Malus domestica HOM05D007154 ORTHO05D008945 3.2e-35 152.1 140 55.0
PSO063G0981 Papaver somniferum HOM05D007154 ORTHO05D008945 7.2e-35 151.0 142 51.4
PSO782G0712 Papaver somniferum HOM05D007154 ORTHO05D008945 7.2e-35 151.0 142 51.4
Solyc04g008770.3 Solanum lycopersicum HOM05D007154 ORTHO05D008945 7.2e-35 151.0 153 53.6
Sopen04g003950 Solanum pennellii HOM05D007154 ORTHO05D008945 7.2e-35 151.0 153 53.6
Lsat_1_v5_gn_9_117140 Lactuca sativa HOM05D007154 ORTHO05D008945 1.2e-34 150.2 119 58.8
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 1.2e-34 150.2 113 61.9
Aa31LG11G2830 Aethionema arabicum HOM05D007154 ORTHO05D008945 2.1e-34 149.4 150 52.0
Prupe.1G351600 Prunus persica HOM05D007154 ORTHO05D008945 2.1e-34 149.4 149 55.0
AT5G23395 Arabidopsis thaliana HOM05D007154 ORTHO05D008945 2.7e-34 149.1 153 52.3
AL6G34660 Arabidopsis lyrata HOM05D007154 ORTHO05D008945 3.6e-34 148.7 125 57.6
Ah.10g037940 Amaranthus hybridus HOM05D007154 ORTHO05D008945 7.9e-34 147.5 140 52.1
Oeu019256.1 Olea europaea HOM05D007154 ORTHO05D008945 7.9e-34 147.5 151 54.3
Nitab4.5_0007445g0030 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.8e-33 146.4 121 61.2
vmacro16164 Vaccinium macrocarpon HOM05D007154 ORTHO05D008945 2.3e-33 146.0 131 55.7
Thhalv10005037m.g Eutrema salsugineum HOM05D007154 ORTHO05D008945 3.0e-33 145.6 127 54.3
Sp2g23770 Schrenkiella parvula HOM05D007154 ORTHO05D008945 3.9e-33 145.2 117 58.1
CiPaw.16G000700 Carya illinoinensis HOM05D007154 ORTHO05D008945 5.1e-33 144.8 147 55.1
Nitab4.5_0011708g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 8.8e-33 144.1 121 60.3
Sc10g0006590 Simmondsia chinensis HOM05D007154 ORTHO05D008945 1.1e-32 143.7 147 52.4
THA.LOC104800635 Tarenaya hassleriana HOM05D007154 ORTHO05D008945 1.1e-32 143.7 149 51.0
Glyma.16G008100 Glycine max HOM05D007154 ORTHO05D008945 1.5e-32 143.3 89 74.2
Nitab4.5_0002707g0010 Nicotiana tabacum HOM05D007154 ORTHO05D008945 1.5e-32 143.3 121 59.5
Cc00_g03880 Coffea canephora HOM05D007154 ORTHO05D008945 2.5e-32 142.5 159 52.2
CDE04G0025 Ceratophyllum demersum HOM05D007154 ORTHO05D008945 3.3e-32 142.1 125 54.4
Migut.B01210 Erythranthe guttata HOM05D007154 ORTHO05D008945 3.3e-32 142.1 152 53.3
SGA_v2.0_scaffold166G38315 Striga asiatica HOM05D007154 ORTHO05D008945 4.3e-32 141.7 143 56.6
HanXRQChr13g0420721 Helianthus annuus HOM05D007154 ORTHO05D008945 9.7e-32 140.6 114 58.8
HPP92_003488 Vanilla planifolia HOM05D007154 ORTHO05D008945 9.7e-32 140.6 108 56.5
Carub.0006s2118 Capsella rubella HOM05D007154 ORTHO05D008945 1.3e-31 140.2 134 52.2
Lj3C844G3 Lonicera japonica HOM05D007154 ORTHO05D008945 2.2e-31 139.4 143 53.8
A06p34370 Brassica napus HOM05D007154 ORTHO05D008945 6.3e-31 137.9 164 47.6
BraA06t26367Z Brassica rapa HOM05D007154 ORTHO05D008945 6.3e-31 137.9 164 47.6
Zm00001eb427080 Zea mays HOM05D007154 ORTHO05D008945 2.4e-30 136.0 114 57.9
ATR0124G040 Amborella trichopoda HOM05D007154 ORTHO05D008945 4.1e-30 135.2 147 50.3
C07p44160 Brassica napus HOM05D007154 ORTHO05D008945 5.3e-30 134.8 161 44.7
BolC7t44940H Brassica oleracea HOM05D007154 ORTHO05D008945 5.3e-30 134.8 161 44.7
Os04g0527700 Oryza sativa ssp. japonica HOM05D007154 ORTHO05D008945 5.3e-30 134.8 148 51.4
ECA240G2562 Erigeron canadensis HOM05D007154 ORTHO05D008945 2.0e-29 132.9 131 49.6
FvH4_4g37330 Fragaria vesca HOM05D007154 ORTHO05D008945 2.6e-29 132.5 97 62.9
Hund16199 Selenicereus undatus HOM05D007154 ORTHO05D008945 2.6e-29 132.5 142 50.0
SGA_v2.0_scaffold249G44952 Striga asiatica HOM05D007154 ORTHO05D008945 3.4e-29 132.1 143 55.2
HPP92_026886 Vanilla planifolia HOM05D007154 ORTHO05D008945 5.9e-29 131.3 111 55.0
CARHR190110 Cardamine hirsuta HOM05D007154 ORTHO05D008945 7.7e-29 131.0 104 56.7
Haze_17398 Corylus avellana HOM05D007154 ORTHO05D008945 7.7e-29 131.0 147 51.7
Cpa.g.sc221.16 Carica papaya HOM05D007154 ORTHO05D008945 1.0e-28 130.6 106 60.4
Zm00001eb076710 Zea mays HOM05D007154 ORTHO05D008945 1.1e-27 127.1 96 61.5
TAR371G0737 Trochodendron aralioides HOM05D007154 ORTHO05D008945 1.9e-27 126.3 131 48.1
BcaNung03727 Brassica carinata HOM05D007154 ORTHO05D008945 1.0e-25 120.6 132 47.7
unitig_61.g26453 Utricularia gibba HOM05D007154 ORTHO05D008945 1.4e-25 120.2 119 52.9
SHI21164 Sapria himalayana HOM05D007154 ORTHO05D008945 3.0e-25 119.0 109 55.0
Duzib248G1404 Durio zibethinus HOM05D007154 ORTHO05D008945 6.7e-25 117.9 135 43.7
TAR627G0850 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.3e-23 111.3 100 52.0
TAR622G0969 Trochodendron aralioides HOM05D007154 ORTHO05D008945 6.1e-18 94.7 120 43.3
Oeu037446.1 Olea europaea HOM05D007154 ORTHO05D008945 1.8e-17 93.2 73 63.0
Pp3c11_17450 Physcomitrium patens HOM05D007154 ORTHO05D008945 8.2e-15 84.3 89 42.7
Duzib051G0001 Durio zibethinus HOM05D007154 ORTHO05D008945 3.1e-14 82.4 87 47.1
MCO07G261 Micromonas commoda HOM05D007154 ORTHO05D008945 2.3e-09 66.2 92 35.9
AagrBONN_evm.TU.Sc2ySwM_362.2201 Anthoceros agrestis HOM05D007154 ORTHO05D008945 1.5e-08 63.5 56 50.0
Cfa026739 Carpinus fangiana HOM05D007154 ORTHO05D008945 6.3e-07 58.2 117 27.4
SEGI_35140 Sequoiadendron giganteum HOM05D007154 ORTHO05D008945 3.1e-06 55.8 87 34.5
Mapoly0093s0036 Marchantia polymorpha HOM05D007154 ORTHO05D008945 5.3e-06 55.1 130 26.2


User provided reference genes

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