Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36571 Trifolium pratense HOM05D001338 ORTHO05D001239 1.9e-50 202.2 102 100.0
TPR.G17453 Trifolium pratense HOM05D001338 ORTHO05D001239 2.1e-41 172.2 101 83.2
CANSAT35G0728 Cannabis sativa HOM05D001338 ORTHO05D001239 4.0e-40 167.9 101 79.2
CANSAT11G1935 Cannabis sativa HOM05D001338 ORTHO05D001239 5.2e-40 167.5 101 78.2
AUR62037832 Chenopodium quinoa HOM05D001338 ORTHO05D001239 5.2e-40 167.5 101 77.2
Zm00001eb426040 Zea mays HOM05D001338 ORTHO05D001239 2.9e-35 151.8 100 72.0
HanXRQChr10g0286761 Helianthus annuus HOM05D001338 ORTHO05D001239 3.2e-34 148.3 99 66.7
AUR62026124 Chenopodium quinoa HOM05D001338 ORTHO05D001239 3.0e-32 141.7 97 69.1
TPR.G34669 Trifolium pratense HOM05D001338 ORTHO05D001239 5.2e-32 141.0 99 62.6
CANSAT21G2437 Cannabis sativa HOM05D001338 ORTHO05D001239 2.6e-31 138.7 100 62.0
PSO017G0847 Papaver somniferum HOM05D001338 ORTHO05D001239 5.7e-31 137.5 100 62.0
THA.LOC104804542 Tarenaya hassleriana HOM05D001338 ORTHO05D001239 7.5e-31 137.1 87 73.6
TWI74G0957 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 9.8e-31 136.7 100 61.0
CANSAT21G0118 Cannabis sativa HOM05D001338 ORTHO05D001239 1.3e-30 136.3 100 60.0
PSO210G1522 Papaver somniferum HOM05D001338 ORTHO05D001239 4.8e-30 134.4 100 61.0
PSO724G1235 Papaver somniferum HOM05D001338 ORTHO05D001239 4.8e-30 134.4 100 61.0
RcHm_v2.0_Chr7g0198811 Rosa chinensis HOM05D001338 ORTHO05D001239 8.3e-30 133.7 101 58.4
MD01G1087700 Malus domestica HOM05D001113 ORTHO05D000968 1.1e-29 133.3 99 62.6
CSS0011720 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.4e-29 132.9 100 61.0
CSS0039736 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.4e-29 132.9 100 61.0
FvH4_4g01531 Fragaria vesca HOM05D001338 ORTHO05D001239 1.4e-29 132.9 100 59.0
PSO541G2431 Papaver somniferum HOM05D001338 ORTHO05D001239 7.0e-29 130.6 100 60.0
Gohir.D06G166250 Gossypium hirsutum HOM05D001338 ORTHO05D001239 9.1e-29 130.2 100 64.0
TPR.G35432 Trifolium pratense HOM05D001338 ORTHO05D001239 9.1e-29 130.2 69 91.3
HanXRQChr11g0321041 Helianthus annuus HOM05D001338 ORTHO05D001239 4.5e-28 127.9 101 52.5
TWI81G1066 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 4.5e-28 127.9 100 59.0
FvH4_1g08761 Fragaria vesca HOM05D001338 ORTHO05D001239 3.8e-27 124.8 100 55.0
FvH4_5g30891 Fragaria vesca HOM05D001338 ORTHO05D001239 3.8e-27 124.8 100 55.0
CANSAT56G4418 Cannabis sativa HOM05D001338 ORTHO05D001239 5.0e-27 124.4 100 58.0
CANSAT64G2348 Cannabis sativa HOM05D001338 ORTHO05D001239 5.0e-27 124.4 100 58.0
Atru.chr1.2432 Acer truncatum HOM05D001338 ORTHO05D001239 1.1e-26 123.2 100 59.0
RcHm_v2.0_Chr1g0320361 Rosa chinensis HOM05D001338 ORTHO05D001239 1.1e-26 123.2 100 59.0
Atru.chr2.1436 Acer truncatum HOM05D001338 ORTHO05D001239 1.5e-26 122.9 100 57.0
CANSAT80G1592 Cannabis sativa HOM05D001338 ORTHO05D001239 2.5e-26 122.1 100 57.0
PSO384G4132 Papaver somniferum HOM05D001338 ORTHO05D001239 2.5e-26 122.1 99 56.6
CANSAT11G2147 Cannabis sativa HOM05D001338 ORTHO05D001239 4.2e-26 121.3 100 57.0
Thhalv10001096m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 4.2e-26 121.3 100 55.0
PSO724G1135 Papaver somniferum HOM05D001338 ORTHO05D001239 4.2e-26 121.3 100 57.0
Thhalv10016048m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 5.5e-26 120.9 100 55.0
Glyma.14G107400 Glycine max HOM05D001338 ORTHO05D001239 5.5e-26 120.9 87 62.1
PSO675G8898 Papaver somniferum HOM05D001338 ORTHO05D001239 5.5e-26 120.9 99 55.6
Oeu064240.1 Olea europaea HOM05D001338 ORTHO05D001239 7.2e-26 120.6 92 57.6
PSO063G5018 Papaver somniferum HOM05D001338 ORTHO05D001239 7.2e-26 120.6 100 56.0
PSO210G0436 Papaver somniferum HOM05D001338 ORTHO05D001239 7.2e-26 120.6 100 56.0
PSO541G0488 Papaver somniferum HOM05D001338 ORTHO05D001239 7.2e-26 120.6 100 56.0
TWI73G0975 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 7.2e-26 120.6 97 59.8
PSO210G4276 Papaver somniferum HOM05D001338 ORTHO05D001239 9.5e-26 120.2 100 55.0
PSO801G0680 Papaver somniferum HOM05D001338 ORTHO05D001239 1.6e-25 119.4 99 54.5
PSO339G3643 Papaver somniferum HOM05D001338 ORTHO05D001239 2.1e-25 119.0 100 56.0
CANSAT54G1041 Cannabis sativa HOM05D001338 ORTHO05D001239 4.7e-25 117.9 100 56.0
BolC1t04570H Brassica oleracea HOM05D000012 ORTHO05D001652 6.1e-25 117.5 100 55.0
Zm00001eb077850 Zea mays HOM05D001338 ORTHO05D001239 6.1e-25 117.5 100 58.0
CANSAT80G1793 Cannabis sativa HOM05D001338 ORTHO05D001239 8.0e-25 117.1 100 56.0
CARHR252010 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.0e-24 116.7 100 55.0
PSO801G0833 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-24 116.3 100 54.0
Thhalv10009736m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.8e-24 115.9 100 49.0
Thhalv10017956m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 1.8e-24 115.9 100 54.0
PSO063G1472 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-24 115.9 100 54.0
PSO541G1638 Papaver somniferum HOM05D001338 ORTHO05D001239 2.3e-24 115.5 98 54.1
Thhalv10009558m.g Eutrema salsugineum HOM05D001338 ORTHO05D001239 3.0e-24 115.2 100 48.0
PSO063G3812 Papaver somniferum HOM05D001338 ORTHO05D001239 8.9e-24 113.6 101 50.5
Oeu016868.1 Olea europaea HOM05D001338 ORTHO05D001239 2.0e-23 112.5 101 48.5
Oeu054866.1 Olea europaea HOM05D001338 ORTHO05D001239 4.4e-23 111.3 101 49.5
AT2G06500 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 5.7e-23 110.9 100 52.0
Oeu008700.1 Olea europaea HOM05D001338 ORTHO05D001239 5.7e-23 110.9 101 50.5
TWI18G0851 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 9.8e-23 110.2 100 54.0
CARHR048790 Cardamine hirsuta HOM05D001338 ORTHO05D001239 1.7e-22 109.4 99 53.5
Oeu012177.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-22 109.4 101 50.5
Oeu030195.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-22 109.0 101 49.5
Oeu039597.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-22 109.0 101 50.5
Oeu052557.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-22 109.0 101 49.5
Oeu056375.1 Olea europaea HOM05D001338 ORTHO05D001239 2.8e-22 108.6 101 47.5
AT1G35150 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 3.7e-22 108.2 99 51.5
Oeu028129.1 Olea europaea HOM05D001338 ORTHO05D001239 3.7e-22 108.2 101 49.5
PSO210G5802 Papaver somniferum HOM05D001338 ORTHO05D001239 3.7e-22 108.2 101 50.5
Oeu037760.1 Olea europaea HOM05D001338 ORTHO05D001239 4.9e-22 107.8 92 53.3
PSO104G0173 Papaver somniferum HOM05D001338 ORTHO05D001239 6.3e-22 107.5 99 48.5
Oeu042321.2 Olea europaea HOM05D001338 ORTHO05D001239 8.3e-22 107.1 101 48.5
PSO541G2490 Papaver somniferum HOM05D001338 ORTHO05D001239 8.3e-22 107.1 99 48.5
PSO478G0891 Papaver somniferum HOM05D001338 ORTHO05D001239 1.1e-21 106.7 99 48.5
PSO063G7197 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-21 106.3 99 48.5
PSO170G2214 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-21 106.3 99 49.5
PSO478G1760 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-21 106.3 99 49.5
PSO478G4662 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-21 106.3 99 49.5
PSO781G0133 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-21 106.3 99 49.5
PSO421G0097 Papaver somniferum HOM05D001338 ORTHO05D001239 1.8e-21 105.9 93 52.7
Oeu011673.1 Olea europaea HOM05D001338 ORTHO05D001239 4.1e-21 104.8 101 48.5
PSO170G1703 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-21 104.8 99 48.5
PSO764G0071 Papaver somniferum HOM05D001338 ORTHO05D001239 4.1e-21 104.8 99 48.5
Gohir.A06G101504 Gossypium hirsutum HOM05D001338 ORTHO05D001239 2.0e-20 102.4 87 57.5
PSO386G0185 Papaver somniferum HOM05D001338 ORTHO05D001239 2.7e-20 102.1 100 50.0
Oeu063768.1 Olea europaea HOM05D001338 ORTHO05D001239 3.5e-20 101.7 101 47.5
Zm00001eb237490 Zea mays HOM05D001338 ORTHO05D001239 4.5e-20 101.3 65 67.7
Glyma.18G183000 Glycine max HOM05D001338 ORTHO05D001239 7.8e-20 100.5 75 57.3
PSO063G6584 Papaver somniferum HOM05D001338 ORTHO05D001239 7.8e-20 100.5 99 46.5
SpUn0007_0210 Schrenkiella parvula HOM05D001338 ORTHO05D001239 1.3e-19 99.8 99 52.5
BolC1t04569H Brassica oleracea HOM05D001338 ORTHO05D001239 1.7e-19 99.4 86 54.7
FvH4_1g26762 Fragaria vesca HOM05D001338 ORTHO05D001239 1.7e-19 99.4 85 54.1
PSO832G4176 Papaver somniferum HOM05D001338 ORTHO05D001239 1.7e-19 99.4 99 46.5
PSO384G4498 Papaver somniferum HOM05D001338 ORTHO05D001239 2.9e-19 98.6 100 42.0
Oeu006251.1 Olea europaea HOM05D001338 ORTHO05D001239 5.0e-19 97.8 72 56.9
TWI74G1236 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.0e-19 97.8 62 67.7
PSO144G0149 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-19 97.1 84 52.4
Atru.chr12.2101 Acer truncatum HOM05D001338 ORTHO05D001239 5.6e-18 94.4 85 51.8
CSS0027088 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.6e-17 92.8 65 64.6
CiPaw.02G115100 Carya illinoinensis HOM05D001338 ORTHO05D001239 1.6e-17 92.8 68 61.8
Oeu035174.1 Olea europaea HOM05D001338 ORTHO05D001239 2.1e-17 92.4 101 46.5
Oeu063541.1 Olea europaea HOM05D001338 ORTHO05D001239 4.7e-17 91.3 64 59.4
PSO781G0024 Papaver somniferum HOM05D001338 ORTHO05D001239 4.7e-17 91.3 81 49.4
CSS0006650 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.1e-17 90.9 65 63.1
PSO063G4296 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-16 90.1 99 39.4
PSO782G2771 Papaver somniferum HOM05D001338 ORTHO05D001239 1.0e-16 90.1 101 43.6
CARHR257160 Cardamine hirsuta HOM05D001338 ORTHO05D001239 2.3e-16 89.0 94 46.8
PSO384G2104 Papaver somniferum HOM05D001338 ORTHO05D001239 3.0e-16 88.6 63 61.9
Oeu012605.1 Olea europaea HOM05D001338 ORTHO05D001239 6.8e-16 87.4 62 56.5
Oeu029248.1 Olea europaea HOM05D001338 ORTHO05D001239 8.9e-16 87.0 63 63.5
Oeu060590.1 Olea europaea HOM05D001338 ORTHO05D001239 8.9e-16 87.0 86 48.8
PSO138G0008 Papaver somniferum HOM05D001338 ORTHO05D001239 1.2e-15 86.7 82 43.9
FvH4_1g10851 Fragaria vesca HOM05D001338 ORTHO05D001239 1.5e-15 86.3 104 44.2
AT5G35475 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.0e-15 85.9 83 51.8
CSS0005716 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.2e-14 82.4 57 68.4
Atru.chr5.2972 Acer truncatum HOM05D000003 ORTHO05D002259 2.9e-14 82.0 63 60.3
Aqoxy7G02175 Aquilegia oxysepala HOM05D001338 ORTHO05D001239 2.9e-14 82.0 78 51.3
TWI31G0800 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.4e-13 79.7 55 61.8
TWI31G1167 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 1.4e-13 79.7 55 61.8
Oeu054316.1 Olea europaea HOM05D001338 ORTHO05D001239 7.0e-13 77.4 101 40.6
PSO761G0174 Papaver somniferum HOM05D001338 ORTHO05D001239 7.0e-13 77.4 70 47.1
CARHR217440 Cardamine hirsuta HOM05D001338 ORTHO05D001239 4.6e-12 74.7 63 50.8
CSS0004687 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.0e-12 74.3 57 54.4
Oeu034372.1 Olea europaea HOM05D001338 ORTHO05D001239 7.8e-12 73.9 101 39.6
TPR.G25675 Trifolium pratense HOM05D000006 ORTHO05D000001 1.3e-11 73.2 55 61.8
Oeu055078.1 Olea europaea HOM05D001338 ORTHO05D001239 1.7e-11 72.8 54 59.3
Oeu018676.2 Olea europaea HOM05D001338 ORTHO05D001239 3.0e-11 72.0 54 57.4
PSO478G0790 Papaver somniferum HOM05D001338 ORTHO05D001239 6.6e-11 70.9 93 39.8
PSO541G4464 Papaver somniferum HOM05D001338 ORTHO05D001239 8.6e-11 70.5 60 56.7
Sp6g08540 Schrenkiella parvula HOM05D001338 ORTHO05D001239 8.6e-11 70.5 59 49.2
CSS0023742 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 2.5e-10 68.9 51 56.9
CARHR184750 Cardamine hirsuta HOM05D001338 ORTHO05D001239 3.3e-10 68.6 62 51.6
Oeu064199.1 Olea europaea HOM05D001338 ORTHO05D001239 3.3e-10 68.6 60 51.7
CiPaw.04G075300 Carya illinoinensis HOM05D001338 ORTHO05D001239 4.3e-10 68.2 50 60.0
CiPaw.11G014600 Carya illinoinensis HOM05D001338 ORTHO05D001239 4.3e-10 68.2 68 51.5
TWI74G0662 Tripterygium wilfordii HOM05D001338 ORTHO05D001239 5.6e-10 67.8 75 44.0
CSS0034678 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 7.3e-10 67.4 49 59.2
CSS0006616 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.6e-09 66.2 51 54.9
Oeu012998.1 Olea europaea HOM05D001338 ORTHO05D001239 2.8e-09 65.5 74 43.2
CSS0026998 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 6.2e-09 64.3 51 52.9
FvH4_6g47641 Fragaria vesca HOM05D001338 ORTHO05D001239 6.2e-09 64.3 56 48.2
CSS0012104 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 8.0e-09 63.9 47 57.4
PSO135G0743 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-08 63.2 51 56.9
PSO170G3462 Papaver somniferum HOM05D001338 ORTHO05D001239 1.4e-08 63.2 51 56.9
CANSAT54G1040 Cannabis sativa HOM05D001338 ORTHO05D001239 2.3e-08 62.4 93 39.8
CSS0029771 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.1e-08 62.0 47 55.3
AT4G10200 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 5.2e-08 61.2 52 57.7
CANSAT64G1081 Cannabis sativa HOM05D001338 ORTHO05D001239 5.2e-08 61.2 93 39.8
PSO675G6439 Papaver somniferum HOM05D001338 ORTHO05D001239 5.2e-08 61.2 51 54.9
Oeu020831.2 Olea europaea HOM05D001338 ORTHO05D001239 6.8e-08 60.8 54 48.1
Gohir.D05G274450 Gossypium hirsutum HOM05D001338 ORTHO05D001239 1.2e-07 60.1 51 51.0
Gorai.009G287700 Gossypium raimondii HOM05D001338 ORTHO05D001239 2.0e-07 59.3 51 51.0
Oeu032006.1 Olea europaea HOM05D001338 ORTHO05D001239 4.4e-07 58.2 43 58.1
Oeu009496.1 Olea europaea HOM05D001338 ORTHO05D001239 9.8e-07 57.0 43 58.1
CSS0016533 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.3e-06 56.6 49 49.0
CSS0025100 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 1.3e-06 56.6 50 46.0
PSO063G5722 Papaver somniferum HOM05D001338 ORTHO05D001239 1.3e-06 56.6 49 49.0
AT3G29638 Arabidopsis thaliana HOM05D001338 ORTHO05D001239 2.2e-06 55.8 51 45.1
Oeu019018.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-06 55.8 51 47.1
Oeu051319.1 Olea europaea HOM05D001338 ORTHO05D001239 2.2e-06 55.8 51 45.1
CSS0007608 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 3.7e-06 55.1 44 50.0
Sp6g14340 Schrenkiella parvula HOM05D001338 ORTHO05D001239 3.7e-06 55.1 63 41.3
SpUn0060_0030 Schrenkiella parvula HOM05D001338 ORTHO05D001239 3.7e-06 55.1 63 41.3
CSS0047876 Camellia sinensis var. sinensis HOM05D001338 ORTHO05D001239 4.9e-06 54.7 43 58.1
Oeu027891.1 Olea europaea HOM05D001338 ORTHO05D001239 6.4e-06 54.3 51 45.1
PSO675G4854 Papaver somniferum HOM05D001338 ORTHO05D001239 6.4e-06 54.3 98 36.7


User provided reference genes

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