Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36524 Trifolium pratense HOM05D001538 ORTHO05D000007 6.3e-216 753.8 379 100.0
TPR.G32743 Trifolium pratense HOM05D001538 ORTHO05D000007 1.2e-33 148.3 187 49.2
TPR.G19027 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-23 115.2 125 51.2
TPR.G24447 Trifolium pratense HOM05D000003 ORTHO05D000006 3.3e-15 87.0 60 63.3
TPR.G38577 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-14 84.0 68 61.8
TPR.G18365 Trifolium pratense HOM05D001538 ORTHO05D000007 3.6e-14 83.6 64 62.5
TPR.G36504 Trifolium pratense HOM05D000250 ORTHO05D000007 3.6e-14 83.6 246 31.7
TPR.G16012 Trifolium pratense HOM05D001538 ORTHO05D000007 1.1e-13 82.0 112 45.5
Medtr6g045237 Medicago truncatula HOM05D001538 ORTHO05D000007 4.0e-13 80.1 197 29.9
TPR.G23606 Trifolium pratense HOM05D001538 ORTHO05D000007 4.0e-13 80.1 58 60.3
TPR.G38827 Trifolium pratense HOM05D001538 ORTHO05D000007 6.9e-13 79.3 67 53.7
TPR.G21617 Trifolium pratense HOM05D001538 ORTHO05D000007 2.6e-12 77.4 114 41.2
TPR.G26139 Trifolium pratense HOM05D005518 ORTHO05D001269 2.6e-12 77.4 118 44.1
TPR.G15063 Trifolium pratense HOM05D001538 ORTHO05D000007 3.4e-12 77.0 110 44.5
Medtr6g061130 Medicago truncatula HOM05D001538 ORTHO05D000007 5.8e-12 76.3 64 54.7
Medtr8g041780 Medicago truncatula HOM05D001538 ORTHO05D000007 1.7e-11 74.7 95 44.2
TPR.G32955 Trifolium pratense HOM05D001538 ORTHO05D000007 2.9e-11 73.9 60 60.0
Psat5g139920 Pisum sativum HOM05D005518 ORTHO05D001269 1.9e-10 71.2 115 41.7
FAN18G1514 Fragaria x ananassa HOM05D000557 ORTHO05D001269 5.4e-10 69.7 87 46.0
Medtr4g031410 Medicago truncatula HOM05D001538 ORTHO05D000007 9.3e-10 68.9 66 54.5
Medtr4g031755 Medicago truncatula HOM05D001538 ORTHO05D000007 9.3e-10 68.9 66 54.5
Medtr1g032900 Medicago truncatula HOM05D016686 ORTHO05D000007 2.1e-09 67.8 64 45.3
Medtr4g031470 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-09 67.8 66 54.5
Medtr4g031785 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-09 67.8 66 54.5
Medtr7g111460 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-09 67.8 107 38.3
Medtr3g075070 Medicago truncatula HOM05D005518 ORTHO05D001269 2.7e-09 67.4 127 39.4
Psat3g091600 Pisum sativum HOM05D000003 ORTHO05D000004 3.5e-09 67.0 61 45.9
Lalb_Chr10g0106351 Lupinus albus HOM05D001538 ORTHO05D000007 6.0e-09 66.2 80 42.5
Lj6A56G21 Lonicera japonica HOM05D001538 ORTHO05D000007 1.8e-08 64.7 95 42.1
Medtr1g040935 Medicago truncatula HOM05D001538 ORTHO05D000007 2.3e-08 64.3 112 34.8
Lj9C691T2 Lonicera japonica HOM05D001538 ORTHO05D000007 3.0e-08 63.9 168 28.6
Medtr7g056053 Medicago truncatula HOM05D001538 ORTHO05D000007 3.0e-08 63.9 60 46.7
Lj8C741G12 Lonicera japonica HOM05D001538 ORTHO05D000007 3.9e-08 63.5 174 29.9
TPR.G977 Trifolium pratense HOM05D001538 ORTHO05D016346 3.9e-08 63.5 60 46.7
TPR.G3711 Trifolium pratense HOM05D001538 ORTHO05D000007 5.1e-08 63.2 56 50.0
TPR.G25770 Trifolium pratense HOM05D001538 ORTHO05D000007 6.7e-08 62.8 56 51.8
Lj7P653T23 Lonicera japonica HOM05D001538 ORTHO05D000007 8.7e-08 62.4 56 48.2
Lj9C305T8 Lonicera japonica HOM05D001538 ORTHO05D000007 8.7e-08 62.4 56 42.9
Lalb_Chr13g0290751 Lupinus albus HOM05D000003 ORTHO05D000004 8.7e-08 62.4 129 31.0
Medtr4g060870 Medicago truncatula HOM05D001538 ORTHO05D000007 8.7e-08 62.4 127 33.1
Lj4A924T29 Lonicera japonica HOM05D001538 ORTHO05D000007 1.1e-07 62.0 237 24.9
TPR.G16991 Trifolium pratense HOM05D001538 ORTHO05D000007 1.5e-07 61.6 60 45.0
TPR.G27280 Trifolium pratense HOM05D001538 ORTHO05D000007 1.9e-07 61.2 76 39.5
Psat3g169080 Pisum sativum HOM05D001538 ORTHO05D000007 2.5e-07 60.8 59 44.1
TPR.G39433 Trifolium pratense HOM05D001538 ORTHO05D000007 2.5e-07 60.8 54 50.0
Lj8A740G21 Lonicera japonica HOM05D001538 ORTHO05D000007 3.3e-07 60.5 111 32.4
Lju225C4G7 Lonicera japonica HOM05D001538 ORTHO05D011045 3.3e-07 60.5 99 33.3
TPR.G13832 Trifolium pratense HOM05D001538 ORTHO05D000007 3.3e-07 60.5 60 48.3
Glyma.06G172500 Glycine max HOM05D005518 ORTHO05D001269 4.3e-07 60.1 108 40.7
Medtr3g079805 Medicago truncatula HOM05D001538 ORTHO05D000007 4.3e-07 60.1 53 50.9
Phvul.002G080500 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 4.3e-07 60.1 58 44.8
SHI17710 Sapria himalayana HOM05D000003 ORTHO05D000007 4.3e-07 60.1 78 42.3
Lj9C692G13 Lonicera japonica HOM05D001538 ORTHO05D000007 5.6e-07 59.7 67 41.8
Medtr6g043680 Medicago truncatula HOM05D001538 ORTHO05D000007 7.4e-07 59.3 64 45.3
TPR.G27792 Trifolium pratense HOM05D001538 ORTHO05D000007 7.4e-07 59.3 140 27.1
Lj2C4G6 Lonicera japonica HOM05D001538 ORTHO05D000007 9.6e-07 58.9 98 34.7
Medtr5g034920 Medicago truncatula HOM05D001538 ORTHO05D000007 9.6e-07 58.9 60 45.0
Medtr6g471850 Medicago truncatula HOM05D001538 ORTHO05D000007 9.6e-07 58.9 114 33.3
Lj8C740T16 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-06 58.5 60 45.0
Lj8P741T37 Lonicera japonica HOM05D001538 ORTHO05D000007 1.3e-06 58.5 56 46.4
Lj8P741T38 Lonicera japonica HOM05D002145 ORTHO05D000007 1.3e-06 58.5 159 30.8
Ca_14244_v3 Cicer arietinum L. HOM05D001538 ORTHO05D000007 1.6e-06 58.2 118 35.6
Medtr8g040870 Medicago truncatula HOM05D001538 ORTHO05D000007 1.6e-06 58.2 61 42.6
Lj8C741T17 Lonicera japonica HOM05D001538 ORTHO05D000007 2.1e-06 57.8 129 28.7
Medtr1g041005 Medicago truncatula HOM05D001538 ORTHO05D000007 2.1e-06 57.8 46 56.5
vmacro16655 Vaccinium macrocarpon HOM05D005518 ORTHO05D001269 2.1e-06 57.8 81 44.4
Lj2A1219T39 Lonicera japonica HOM05D001538 ORTHO05D000007 2.8e-06 57.4 225 24.0
Lj8C744T6 Lonicera japonica HOM05D001538 ORTHO05D000007 2.8e-06 57.4 60 45.0
Lju4617A0T18 Lonicera japonica HOM05D001538 ORTHO05D000007 2.8e-06 57.4 148 28.4
Psat3g065480 Pisum sativum HOM05D001538 ORTHO05D000007 2.8e-06 57.4 81 37.0
RcHm_v2.0_Chr1g0380401 Rosa chinensis HOM05D005518 ORTHO05D001269 2.8e-06 57.4 131 33.6
TPR.G20035 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-06 57.4 54 48.1
TPR.G33855 Trifolium pratense HOM05D001538 ORTHO05D000007 2.8e-06 57.4 273 27.5
Aqoxy6G02781 Aquilegia oxysepala HOM05D002145 ORTHO05D000007 3.7e-06 57.0 70 38.6
Phvul.009G187600 Phaseolus vulgaris HOM05D001538 ORTHO05D000007 3.7e-06 57.0 70 41.4
Dinv04847 Davidia involucrata HOM05D005518 ORTHO05D001269 4.8e-06 56.6 143 33.6
Lj3P309T4 Lonicera japonica HOM05D001538 ORTHO05D000007 4.8e-06 56.6 89 37.1
TPR.G29890 Trifolium pratense HOM05D001538 ORTHO05D000007 4.8e-06 56.6 46 56.5
RcHm_v2.0_Chr7g0190821 Rosa chinensis HOM05D005518 ORTHO05D001269 6.2e-06 56.2 131 33.6
Lalb_Chr08g0237001 Lupinus albus HOM05D005518 ORTHO05D001269 8.1e-06 55.8 108 40.7


User provided reference genes

Program Settings