Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36459 Trifolium pratense HOM05D000009 ORTHO05D000008 2.1e-25 118.2 61 100.0
TPR.G567 Trifolium pratense HOM05D000009 ORTHO05D000008 3.7e-25 117.5 61 98.4
TPR.G38970 Trifolium pratense HOM05D000009 ORTHO05D000008 1.8e-24 115.2 61 95.1
TPR.G3823 Trifolium pratense HOM05D000009 ORTHO05D000008 1.2e-23 112.5 61 96.7
TPR.G32257 Trifolium pratense HOM05D000009 ORTHO05D000008 4.2e-21 104.0 61 88.5
Medtr3g022130 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-20 102.4 61 86.9
Medtr3g022230 Medicago truncatula HOM05D000009 ORTHO05D000008 8.7e-19 96.3 61 82.0
Medtr0425s0020 Medicago truncatula HOM05D000009 ORTHO05D000008 1.6e-17 92.0 61 78.7
Medtr3g022300 Medicago truncatula HOM05D000009 ORTHO05D000008 1.6e-17 92.0 61 78.7
Medtr3g027200 Medicago truncatula HOM05D000009 ORTHO05D000008 4.8e-17 90.5 61 77.0
Medtr3g023030 Medicago truncatula HOM05D000009 ORTHO05D000008 1.1e-16 89.4 61 78.7
Medtr3g022600 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-16 89.0 61 77.0
Medtr3g015260 Medicago truncatula HOM05D000009 ORTHO05D000008 4.2e-13 77.4 62 71.0
Medtr3g019040 Medicago truncatula HOM05D000009 ORTHO05D000008 4.2e-13 77.4 62 69.4
Glyma.16G079400 Glycine max HOM05D000009 ORTHO05D000008 1.2e-12 75.9 63 66.7
TPR.G9874 Trifolium pratense HOM05D000009 ORTHO05D000008 1.6e-12 75.5 61 65.6
Medtr3g018980 Medicago truncatula HOM05D000009 ORTHO05D000008 4.6e-12 73.9 62 67.7
TPR.G33671 Trifolium pratense HOM05D000009 ORTHO05D000008 4.6e-12 73.9 62 67.7
Medtr3g018930 Medicago truncatula HOM05D000009 ORTHO05D000008 6.1e-12 73.6 62 67.7
VMungo1080G1599 Vigna mungo HOM05D000009 ORTHO05D000008 5.1e-11 70.5 60 61.7
TPR.G3847 Trifolium pratense HOM05D000009 ORTHO05D000008 1.5e-10 68.9 61 62.3
Phvul.005G031200 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.0e-10 68.6 61 59.0
TPR.G25552 Trifolium pratense HOM05D000009 ORTHO05D000008 3.3e-10 67.8 61 62.3
TPR.G18811 Trifolium pratense HOM05D000009 ORTHO05D000008 1.3e-09 65.9 61 60.7
TPR.G29626 Trifolium pratense HOM05D000009 ORTHO05D000008 1.3e-09 65.9 61 62.3
Glyma.13G190400 Glycine max HOM05D000009 ORTHO05D000008 2.8e-09 64.7 60 56.7
Glyma.13G190000 Glycine max HOM05D000009 ORTHO05D000008 8.2e-09 63.2 60 56.7
Psat5g213640 Pisum sativum HOM05D000009 ORTHO05D000008 8.2e-09 63.2 61 57.4
TPR.G25209 Trifolium pratense HOM05D000009 ORTHO05D000008 1.1e-08 62.8 50 64.0
TPR.G9868 Trifolium pratense HOM05D006558 ORTHO05D008424 1.1e-08 62.8 61 60.7
Medtr3g025360 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-08 62.4 61 59.0
Medtr7g021000 Medicago truncatula HOM05D000009 ORTHO05D000008 1.4e-08 62.4 61 59.0
Medtr3g027420 Medicago truncatula HOM05D000009 ORTHO05D000008 1.8e-08 62.0 61 59.0
Glyma.13G190800 Glycine max HOM05D000009 ORTHO05D000008 3.1e-08 61.2 60 55.0
TPR.G5894 Trifolium pratense HOM05D000009 ORTHO05D000008 3.1e-08 61.2 61 59.0
Glyma.13G190300 Glycine max HOM05D000009 ORTHO05D000008 5.3e-08 60.5 60 55.0
Glyma.13G193300 Glycine max HOM05D000009 ORTHO05D000008 5.3e-08 60.5 60 55.0
Glyma.13G194100 Glycine max HOM05D000009 ORTHO05D000008 5.3e-08 60.5 60 55.0
Medtr3g019000 Medicago truncatula HOM05D000009 ORTHO05D000008 5.3e-08 60.5 62 59.7
vmacro11082 Vaccinium macrocarpon HOM05D000009 ORTHO05D006542 5.3e-08 60.5 61 52.5
Glyma.13G184900 Glycine max HOM05D000009 ORTHO05D000008 6.9e-08 60.1 60 55.0
Lj3g0007540 Lotus japonicus HOM05D000009 ORTHO05D000008 9.1e-08 59.7 59 57.6
TPR.G36958 Trifolium pratense HOM05D000009 ORTHO05D000008 9.1e-08 59.7 59 57.6
Manes.11G004600 Manihot esculenta HOM05D000009 ORTHO05D000008 1.2e-07 59.3 60 51.7
Medtr3g022920 Medicago truncatula HOM05D000009 ORTHO05D000008 1.2e-07 59.3 61 55.7
Phvul.004G007900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.2e-07 59.3 61 52.5
VMungo0464G0718 Vigna mungo HOM05D000009 ORTHO05D000008 2.0e-07 58.5 61 54.1
Phvul.004G009100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.6e-07 58.2 61 52.5
Phvul.004G013300 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.6e-07 58.2 61 52.5
Phvul.004G013350 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.6e-07 58.2 61 52.5
VMungo0464G1745 Vigna mungo HOM05D000009 ORTHO05D000008 2.6e-07 58.2 61 50.8
Glyma.06G254300 Glycine max HOM05D000009 ORTHO05D000008 3.4e-07 57.8 61 50.8
Medtr3g022400 Medicago truncatula HOM05D000009 ORTHO05D000008 3.4e-07 57.8 61 55.7
Phvul.004G012900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.4e-07 57.8 61 50.8
RcHm_v2.0_Chr1g0318341 Rosa chinensis HOM05D000009 ORTHO05D000008 3.4e-07 57.8 61 52.5
Medtr3g027250 Medicago truncatula HOM05D000009 ORTHO05D000008 4.5e-07 57.4 61 55.7
Phvul.004G009821 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.9e-07 57.0 61 50.8
Phvul.004G013000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.9e-07 57.0 61 49.2
VMungo1127G0612 Vigna mungo HOM05D000009 ORTHO05D000008 5.9e-07 57.0 60 53.3
Phvul.004G016000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 7.7e-07 56.6 62 50.0
Phvul.011G201000 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 7.7e-07 56.6 60 51.7
TPR.G36882 Trifolium pratense HOM05D000009 ORTHO05D000008 7.7e-07 56.6 59 52.5
CiPaw.13G006100 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.0e-06 56.2 58 56.9
CiPaw.13G008800 Carya illinoinensis HOM05D000009 ORTHO05D000008 1.0e-06 56.2 61 49.2
Lj3g0021673 Lotus japonicus HOM05D000009 ORTHO05D000008 1.0e-06 56.2 59 52.5
Lj3g0023701 Lotus japonicus HOM05D000009 ORTHO05D000008 1.0e-06 56.2 59 52.5
Phvul.004G009527 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.0e-06 56.2 60 51.7
Phvul.004G036700 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.0e-06 56.2 61 49.2
TPR.G30440 Trifolium pratense HOM05D000009 ORTHO05D000008 1.0e-06 56.2 59 54.2
VMungo1127G0305 Vigna mungo HOM05D000009 ORTHO05D000008 1.0e-06 56.2 60 53.3
Medtr8g038590 Medicago truncatula HOM05D000009 ORTHO05D000008 1.3e-06 55.8 59 54.2
Phvul.004G008450 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.3e-06 55.8 61 50.8
Phvul.011G200820 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.3e-06 55.8 60 51.7
Prupe.2G046400 Prunus persica HOM05D000009 ORTHO05D000008 1.3e-06 55.8 59 55.9
Duzib106G0323 Durio zibethinus HOM05D000009 ORTHO05D000008 1.7e-06 55.5 59 47.5
Glyma.13G194500 Glycine max HOM05D000009 ORTHO05D000008 1.7e-06 55.5 63 52.4
Medtr3g021100 Medicago truncatula HOM05D000009 ORTHO05D000008 1.7e-06 55.5 62 54.8
Phvul.004G005600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.7e-06 55.5 61 50.8
Phvul.004G008620 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.7e-06 55.5 61 49.2
Phvul.004G009918 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 1.7e-06 55.5 61 49.2
Thecc.10G003900 Theobroma cacao HOM05D000009 ORTHO05D000008 1.7e-06 55.5 59 47.5
Thecc.10G004100 Theobroma cacao HOM05D000009 ORTHO05D000008 1.7e-06 55.5 59 47.5
TPR.G15455 Trifolium pratense HOM05D000009 ORTHO05D000008 1.7e-06 55.5 47 59.6
VMungo0464G0634 Vigna mungo HOM05D000009 ORTHO05D000008 1.7e-06 55.5 61 52.5
Duzib106G1983 Durio zibethinus HOM05D000009 ORTHO05D000008 2.2e-06 55.1 62 53.2
Phvul.004G016532 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.2e-06 55.1 61 49.2
Phvul.004G066125 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.2e-06 55.1 61 49.2
Potri.003G200800 Populus trichocarpa HOM05D000009 ORTHO05D000008 2.2e-06 55.1 60 50.0
Prupe.2G046000 Prunus persica HOM05D000009 ORTHO05D000008 2.2e-06 55.1 59 54.2
VMungo0464G1915 Vigna mungo HOM05D000009 ORTHO05D000008 2.2e-06 55.1 61 52.5
Duzib106G1576 Durio zibethinus HOM05D000009 ORTHO05D000008 2.9e-06 54.7 58 53.4
Glyma.15G230700 Glycine max HOM05D000009 ORTHO05D000008 2.9e-06 54.7 62 50.0
Phvul.004G013100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.9e-06 54.7 61 47.5
Phvul.004G076100 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 2.9e-06 54.7 61 47.5
VMungo0464G1069 Vigna mungo HOM05D000009 ORTHO05D000008 2.9e-06 54.7 61 50.8
GSVIVG01022835001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.9e-06 54.7 59 49.2
GSVIVG01023324001 Vitis vinifera HOM05D000009 ORTHO05D000008 2.9e-06 54.7 60 48.3
Dinv12845 Davidia involucrata HOM05D000009 ORTHO05D000008 3.8e-06 54.3 60 51.7
MD07G1028000 Malus domestica HOM05D000009 ORTHO05D000008 3.8e-06 54.3 59 49.2
Phvul.004G036600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 3.8e-06 54.3 61 47.5
QL04p010600 Quercus lobata HOM05D000009 ORTHO05D000008 3.8e-06 54.3 61 47.5
Thecc.04G203200 Theobroma cacao HOM05D000009 ORTHO05D000008 3.8e-06 54.3 59 50.8
VMungo0464G1842 Vigna mungo HOM05D000009 ORTHO05D000008 3.8e-06 54.3 61 50.8
CANSAT80G0663 Cannabis sativa HOM05D000009 ORTHO05D000008 5.0e-06 53.9 59 49.2
Phvul.004G008680 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.0e-06 53.9 60 51.7
Phvul.004G009281 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.0e-06 53.9 61 47.5
Phvul.011G195900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 5.0e-06 53.9 60 50.0
Thecc.09G233700 Theobroma cacao HOM05D000009 ORTHO05D000008 5.0e-06 53.9 60 48.3
VMungo0464G1278 Vigna mungo HOM05D000009 ORTHO05D000008 5.0e-06 53.9 61 50.8
Hma1.2p1_0839F.1_g226380 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.5e-06 53.5 59 49.2
Hma1.2p1_2386F.1_g321180 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 6.5e-06 53.5 59 49.2
Manes.11G057200 Manihot esculenta HOM05D000009 ORTHO05D000008 6.5e-06 53.5 61 49.2
Medtr3g022940 Medicago truncatula HOM05D000009 ORTHO05D000008 6.5e-06 53.5 54 57.4
Phvul.004G008900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.5e-06 53.5 61 49.2
Phvul.011G181600 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.5e-06 53.5 60 50.0
Phvul.011G193500 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 6.5e-06 53.5 62 46.8
Potri.001G379700 Populus trichocarpa HOM05D000009 ORTHO05D000008 6.5e-06 53.5 58 48.3
VMungo0464G1029 Vigna mungo HOM05D000009 ORTHO05D000008 6.5e-06 53.5 61 50.8
VMungo0464G1113 Vigna mungo HOM05D000009 ORTHO05D000008 6.5e-06 53.5 61 50.8
CANSAT80G0256 Cannabis sativa HOM05D000009 ORTHO05D000008 8.5e-06 53.1 59 57.6
Eucgr.H01041 Eucalyptus grandis HOM05D000009 ORTHO05D000008 8.5e-06 53.1 61 47.5
Hma1.2p1_0573F.1_g181330 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.5e-06 53.1 59 47.5
Hma1.2p1_0573F.1_g181340 Hydrangea macrophylla HOM05D000009 ORTHO05D000008 8.5e-06 53.1 59 47.5
MD08G1056500 Malus domestica HOM05D000009 ORTHO05D000008 8.5e-06 53.1 60 45.0
Phvul.004G036900 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 8.5e-06 53.1 61 50.8
Phvul.011G201101 Phaseolus vulgaris HOM05D000009 ORTHO05D000008 8.5e-06 53.1 60 50.0
QL10p045481 Quercus lobata HOM05D000009 ORTHO05D000008 8.5e-06 53.1 58 50.0
vmacro16502 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 8.5e-06 53.1 62 53.2
GSVIVG01022829001 Vitis vinifera HOM05D000009 ORTHO05D000008 8.5e-06 53.1 59 47.5
GSVIVG01022859001 Vitis vinifera HOM05D000009 ORTHO05D000008 8.5e-06 53.1 59 47.5


User provided reference genes

Program Settings