Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36353 Trifolium pratense HOM05D005950 ORTHO05D008673 1.5e-43 179.1 90 100.0
Medtr1g099520 Medicago truncatula HOM05D005950 ORTHO05D008673 8.3e-42 173.3 90 96.7
TPR.G7754 Trifolium pratense HOM05D005950 ORTHO05D008673 2.4e-41 171.8 87 97.7
Lalb_Chr06g0164721 Lupinus albus HOM05D005950 ORTHO05D008673 3.1e-36 154.8 88 85.2
Prupe.1G214800 Prunus persica HOM05D005950 ORTHO05D008673 5.2e-36 154.1 86 87.2
LjContig00470g0001843 Lotus japonicus HOM05D005950 ORTHO05D008673 1.5e-35 152.5 88 83.0
MD13G1130900 Malus domestica HOM05D005950 ORTHO05D008673 3.4e-35 151.4 86 86.0
Sabra01G0075200 Salix brachista HOM05D005950 ORTHO05D008673 4.4e-35 151.0 85 88.2
Manes.08G101200 Manihot esculenta HOM05D005950 ORTHO05D008673 5.8e-35 150.6 86 84.9
Haze_12503 Corylus avellana HOM05D005950 ORTHO05D008673 9.8e-35 149.8 86 84.9
Potri.001G100300 Populus trichocarpa HOM05D005950 ORTHO05D008673 9.8e-35 149.8 85 87.1
Gohir.A01G020600 Gossypium hirsutum HOM05D005950 ORTHO05D008673 1.7e-34 149.1 88 84.1
TWI36G0089 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 1.7e-34 149.1 86 84.9
Thecc.02G192100 Theobroma cacao HOM05D005950 ORTHO05D008673 2.9e-34 148.3 88 84.1
QL03p049137 Quercus lobata HOM05D005950 ORTHO05D008673 3.7e-34 147.9 86 83.7
CiPaw.05G101200 Carya illinoinensis HOM05D005950 ORTHO05D008673 4.9e-34 147.5 86 83.7
Duzib248G1270 Durio zibethinus HOM05D005950 ORTHO05D008673 4.9e-34 147.5 88 83.0
VMungo0720G2460 Vigna mungo HOM05D005950 ORTHO05D008673 4.9e-34 147.5 88 80.7
COL.COLO4_36001 Corchorus olitorius HOM05D005950 ORTHO05D008673 8.3e-34 146.7 88 81.8
Phvul.007G000300 Phaseolus vulgaris HOM05D005950 ORTHO05D008673 1.1e-33 146.4 87 81.6
Atru.chr12.1419 Acer truncatum HOM05D005950 ORTHO05D008673 1.4e-33 146.0 86 83.7
Ciclev10005525m.g Citrus clementina HOM05D005950 ORTHO05D008673 1.4e-33 146.0 85 84.7
RcHm_v2.0_Chr4g0428871 Rosa chinensis HOM05D005950 ORTHO05D008673 1.4e-33 146.0 85 83.5
FvH4_4g22640 Fragaria vesca HOM05D005950 ORTHO05D008673 1.9e-33 145.6 86 81.4
FAN07G2488 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.9e-33 145.6 86 81.4
FAN12G2095 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.9e-33 145.6 86 81.4
FAN17G1731 Fragaria x ananassa HOM05D005950 ORTHO05D008673 1.9e-33 145.6 86 81.4
CSS0009236 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 2.4e-33 145.2 88 78.4
CSS0041196 Camellia sinensis var. sinensis HOM05D005950 ORTHO05D008673 2.4e-33 145.2 88 78.4
Gorai.002G021400 Gossypium raimondii HOM05D005950 ORTHO05D008673 2.4e-33 145.2 88 80.7
CANSAT01G2759 Cannabis sativa HOM05D005950 ORTHO05D008673 3.2e-33 144.8 87 83.9
arahy.Tifrunner.gnm1.ann1.MTDN4F Arachis hypogaea HOM05D005950 ORTHO05D008673 4.1e-33 144.4 88 80.7
PGR102G2360 Punica granatum HOM05D005950 ORTHO05D008673 4.1e-33 144.4 86 82.6
Cpa.g.sc182.2 Carica papaya HOM05D005950 ORTHO05D008673 7.0e-33 143.7 86 81.4
TWI18G1378 Tripterygium wilfordii HOM05D005950 ORTHO05D008673 7.0e-33 143.7 86 81.4
Dinv03756 Davidia involucrata HOM05D005950 ORTHO05D008673 9.2e-33 143.3 83 81.9
CsaV3_6G007730 Cucumis sativus L. HOM05D005950 ORTHO05D008673 1.2e-32 142.9 86 80.2
THA.LOC104820536 Tarenaya hassleriana HOM05D005950 ORTHO05D008673 1.2e-32 142.9 86 76.7
SalBow2G0445 Salvia bowleyana HOM05D005950 ORTHO05D008673 1.6e-32 142.5 88 76.1
GSVIVG01001090001 Vitis vinifera HOM05D005950 ORTHO05D008673 1.6e-32 142.5 86 80.2
AT1G28140 Arabidopsis thaliana HOM05D005950 ORTHO05D008673 2.1e-32 142.1 86 79.1
Sc19g0003090 Simmondsia chinensis HOM05D005950 ORTHO05D008673 2.1e-32 142.1 88 76.1
MELO3C022359.2 Cucumis melo HOM05D005950 ORTHO05D008673 3.5e-32 141.4 85 81.2
vmacro16072 Vaccinium macrocarpon HOM05D005950 ORTHO05D008673 3.5e-32 141.4 86 79.1
Sed0005763 Sechium edule HOM05D005950 ORTHO05D008673 4.6e-32 141.0 86 79.1
Migut.K01055 Erythranthe guttata HOM05D005950 ORTHO05D008673 6.0e-32 140.6 85 80.0
Thhalv10008446m.g Eutrema salsugineum HOM05D005950 ORTHO05D008673 6.0e-32 140.6 87 78.2
Rhsim12G0072500 Rhododendron simsii HOM05D005950 ORTHO05D008673 6.0e-32 140.6 86 76.7
RhsimUnG0153300 Rhododendron simsii HOM05D005950 ORTHO05D008673 6.0e-32 140.6 86 76.7
SGA_v2.0_scaffold157G37356 Striga asiatica HOM05D005950 ORTHO05D008673 7.8e-32 140.2 88 75.0
Nitab4.5_0000208g0380 Nicotiana tabacum HOM05D005950 ORTHO05D008673 1.0e-31 139.8 86 76.7
CDE06G2125 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 1.3e-31 139.4 88 76.1
Nitab4.5_0006153g0020 Nicotiana tabacum HOM05D005950 ORTHO05D008673 1.3e-31 139.4 86 76.7
CAN.G624.24 Capsicum annuum HOM05D005950 ORTHO05D008673 1.7e-31 139.0 87 74.7
HanXRQChr06g0175111 Helianthus annuus HOM05D005950 ORTHO05D008673 1.7e-31 139.0 85 80.0
MSTRG.8054 Avicennia marina HOM05D005950 ORTHO05D008673 2.3e-31 138.7 88 73.9
Cc11_g15000 Coffea canephora HOM05D005950 ORTHO05D008673 2.3e-31 138.7 85 76.5
DCAR_024633 Daucus carota HOM05D000512 ORTHO05D008673 2.3e-31 138.7 85 75.3
Eucgr.B03560 Eucalyptus grandis HOM05D005950 ORTHO05D008673 2.3e-31 138.7 88 73.9
CDE02G3863 Ceratophyllum demersum HOM05D005950 ORTHO05D008673 3.0e-31 138.3 88 73.9
MBI10_g32324_MAGBIO Magnolia biondii HOM05D005950 ORTHO05D008673 3.0e-31 138.3 85 77.6
Peaxi162Scf00023g00931 Petunia axillaris HOM05D005950 ORTHO05D008673 3.0e-31 138.3 86 75.6
TAR371G0811 Trochodendron aralioides HOM05D005950 ORTHO05D008673 3.0e-31 138.3 86 77.9
HPP92_007045 Vanilla planifolia HOM05D005950 ORTHO05D008673 3.9e-31 137.9 85 75.3
Ah.03g135560 Amaranthus hybridus HOM05D005950 ORTHO05D008673 5.1e-31 137.5 87 75.9
CARHR027610 Cardamine hirsuta HOM05D005950 ORTHO05D008673 5.1e-31 137.5 87 77.0
Aqoxy5G03108 Aquilegia oxysepala HOM05D005950 ORTHO05D008673 6.6e-31 137.1 87 73.6
Hma1.2p1_0660F.1_g197630 Hydrangea macrophylla HOM05D005950 ORTHO05D008673 6.6e-31 137.1 82 78.0
Lsat_1_v5_gn_3_32320 Lactuca sativa HOM05D005950 ORTHO05D008673 6.6e-31 137.1 86 75.6
Carub.0001s2657 Capsella rubella HOM05D005950 ORTHO05D008673 8.6e-31 136.7 86 76.7
Solyc05g012700.3 Solanum lycopersicum HOM05D005950 ORTHO05D008673 8.6e-31 136.7 86 73.3
Sopen05g007530 Solanum pennellii HOM05D005950 ORTHO05D008673 8.6e-31 136.7 86 73.3
Nn3g16271 Nelumbo nucifera HOM05D005950 ORTHO05D008673 1.5e-30 136.0 86 75.6
PGSC0003DMG400028387 Solanum tuberosum HOM05D005950 ORTHO05D008673 1.9e-30 135.6 85 74.1
C05p26890 Brassica napus HOM05D005950 ORTHO05D008673 2.5e-30 135.2 87 75.9
Oeu027106.1 Olea europaea HOM05D005950 ORTHO05D008673 2.5e-30 135.2 85 72.9
Hund27394 Selenicereus undatus HOM05D005950 ORTHO05D008673 2.5e-30 135.2 87 71.3
Lj3A1077T57 Lonicera japonica HOM05D005950 ORTHO05D008673 3.3e-30 134.8 86 72.1
Sp1g24330 Schrenkiella parvula HOM05D005950 ORTHO05D008673 3.3e-30 134.8 87 74.7
unitig_747.g21110 Utricularia gibba HOM05D005950 ORTHO05D008673 4.3e-30 134.4 88 72.7
BcaB07g32425 Brassica carinata HOM05D005950 ORTHO05D008673 5.6e-30 134.0 87 74.7
BcaC05g26819 Brassica carinata HOM05D005950 ORTHO05D008673 5.6e-30 134.0 87 74.7
A09p37910 Brassica napus HOM05D005950 ORTHO05D008673 5.6e-30 134.0 87 74.7
BolC5t31407H Brassica oleracea HOM05D005950 ORTHO05D008673 5.6e-30 134.0 87 74.7
BraA09t39303Z Brassica rapa HOM05D005950 ORTHO05D008673 5.6e-30 134.0 87 74.7
AL1G41670 Arabidopsis lyrata HOM05D005950 ORTHO05D008673 9.5e-30 133.3 86 74.4
Os03g0850600 Oryza sativa ssp. japonica HOM05D005950 ORTHO05D008673 1.6e-29 132.5 85 75.3
TAR629G3081 Trochodendron aralioides HOM05D005950 ORTHO05D008673 2.1e-29 132.1 84 75.0
Zm00001eb064540 Zea mays HOM05D005950 ORTHO05D008673 2.1e-29 132.1 88 73.9
AUR62005715 Chenopodium quinoa HOM05D005950 ORTHO05D008673 3.6e-29 131.3 84 71.4
PSO017G6070 Papaver somniferum HOM05D005950 ORTHO05D008673 4.7e-29 131.0 84 76.2
PSO478G4484 Papaver somniferum HOM05D005950 ORTHO05D008673 4.7e-29 131.0 84 76.2
Aa31sc45G70 Aethionema arabicum HOM05D005950 ORTHO05D008673 1.4e-28 129.4 86 73.3
ATR0582G132 Amborella trichopoda HOM05D005950 ORTHO05D008673 1.4e-28 129.4 88 68.2
Actinidia33998 Actinidia chinensis HOM05D005950 ORTHO05D008673 2.3e-28 128.6 86 72.1
EL10Ac6g13611 Beta vulgaris HOM05D005950 ORTHO05D008673 6.8e-28 127.1 86 70.9
Duzib052G0358 Durio zibethinus HOM05D005950 ORTHO05D008673 3.4e-27 124.8 89 76.4
Pp3c8_12800 Physcomitrium patens HOM05D005950 ORTHO05D008673 9.9e-27 123.2 87 66.7
SEGI_01129 Sequoiadendron giganteum HOM05D005950 ORTHO05D008673 1.7e-26 122.5 88 63.6
CBR_g3659 Chara braunii HOM05D005950 ORTHO05D008673 1.4e-25 119.4 86 66.3
SMO367G1143 Selaginella moellendorffii HOM05D005950 ORTHO05D008673 1.4e-25 119.4 88 64.8
AagrBONN_evm.TU.Sc2ySwM_344.2741 Anthoceros agrestis HOM05D005950 ORTHO05D008673 5.4e-25 117.5 86 66.3
Mapoly0027s0093 Marchantia polymorpha HOM05D005950 ORTHO05D008673 2.1e-24 115.5 81 67.9
Ca_10708_v3 Cicer arietinum L. HOM05D005950 ORTHO05D008673 1.3e-23 112.8 56 96.4
Psat6g195320 Pisum sativum HOM05D005950 ORTHO05D008673 1.3e-23 112.8 56 96.4
Glyma.20G249800 Glycine max HOM05D005950 ORTHO05D008673 3.1e-20 101.7 56 85.7
MD16G1141000 Malus domestica HOM05D005950 ORTHO05D020170 4.0e-20 101.3 62 79.0
AUR62028840 Chenopodium quinoa HOM05D005950 ORTHO05D008673 3.4e-19 98.2 72 61.1
FAN25G3256 Fragaria x ananassa HOM05D005950 ORTHO05D203075 2.9e-18 95.1 87 63.2
Hma1.2p1_0660F.1_g197640 Hydrangea macrophylla HOM05D005950 ORTHO05D020170 6.4e-18 94.0 56 76.8
MCO02G210 Micromonas commoda HOM05D005950 ORTHO05D008673 7.1e-17 90.5 75 56.0
ClCG06G001700 Citrullus lanatus HOM05D005950 ORTHO05D008673 4.6e-16 87.8 86 58.1
FAN20G0916 Fragaria x ananassa HOM05D005950 ORTHO05D020170 1.0e-15 86.7 60 70.0
AL1G56270 Arabidopsis lyrata HOM05D005950 ORTHO05D000283 1.3e-15 86.3 63 66.7
PRCOL_00003015 Prasinoderma coloniale HOM05D005950 ORTHO05D008673 1.4e-12 76.3 82 40.2
Glyma.10G298600 Glycine max HOM05D005950 ORTHO05D020170 1.8e-12 75.9 49 75.5
arahy.Tifrunner.gnm1.ann1.PXY63F Arachis hypogaea HOM05D005950 ORTHO05D008673 4.0e-12 74.7 88 48.9
C05p26860 Brassica napus HOM05D005950 ORTHO05D020170 6.9e-12 73.9 51 68.6
Cre04.g228450 Chlamydomonas reinhardtii HOM05D005950 ORTHO05D008673 1.2e-11 73.2 82 43.9
BolC5t31405H Brassica oleracea HOM05D005950 ORTHO05D020170 1.3e-10 69.7 49 67.3
A09p37930 Brassica napus HOM05D005950 ORTHO05D020170 1.1e-09 66.6 53 60.4
Peaxi162Scf00040g00101 Petunia axillaris HOM05D005950 ORTHO05D008673 9.6e-06 53.5 52 53.8


User provided reference genes

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