Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36232 Trifolium pratense HOM05D000130 ORTHO05D050708 1.2e-32 142.5 67 100.0
Psat6g202720 Pisum sativum HOM05D000130 ORTHO05D000772 3.2e-22 107.8 67 80.6
Medtr1g102160 Medicago truncatula HOM05D000130 ORTHO05D000772 1.2e-21 105.9 67 83.6
Ca_10821_v3 Cicer arietinum L. HOM05D000130 ORTHO05D000772 2.5e-19 98.2 67 73.1
QL12p038666 Quercus lobata HOM05D000130 ORTHO05D000772 3.0e-12 74.7 67 55.2
Cfa008192 Carpinus fangiana HOM05D000130 ORTHO05D000772 9.6e-11 69.7 67 52.2
QL12p038812 Quercus lobata HOM05D000130 ORTHO05D000772 9.6e-11 69.7 67 50.7
QL12p038729 Quercus lobata HOM05D000130 ORTHO05D000772 1.6e-10 68.9 67 52.2
COL.COLO4_14221 Corchorus olitorius HOM05D000130 ORTHO05D000772 2.4e-09 65.1 70 51.4
RcHm_v2.0_Chr1g0376631 Rosa chinensis HOM05D000130 ORTHO05D050708 2.4e-09 65.1 61 54.1
Phvul.007G064600 Phaseolus vulgaris HOM05D000130 ORTHO05D000772 4.0e-09 64.3 55 56.4
Prupe.2G286500 Prunus persica HOM05D000130 ORTHO05D000772 5.3e-09 63.9 61 52.5
Glyma.20G153300 Glycine max HOM05D000130 ORTHO05D000772 6.9e-09 63.5 67 55.2
Phvul.007G064700 Phaseolus vulgaris HOM05D000130 ORTHO05D000772 9.0e-09 63.2 55 58.2
QL12p038638 Quercus lobata HOM05D000130 ORTHO05D000772 9.0e-09 63.2 67 53.7
VMungo0720G1598 Vigna mungo HOM05D000130 ORTHO05D000772 9.0e-09 63.2 55 60.0
Duzib084G1214 Durio zibethinus HOM05D000130 ORTHO05D000772 1.2e-08 62.8 69 53.6
VMungo0720G2516 Vigna mungo HOM05D000130 ORTHO05D000772 1.2e-08 62.8 55 54.5
FvH4_7g28660 Fragaria vesca HOM05D000130 ORTHO05D000772 1.5e-08 62.4 59 50.8
FAN06G2044 Fragaria x ananassa HOM05D000130 ORTHO05D000772 1.5e-08 62.4 59 50.8
FAN06G4787 Fragaria x ananassa HOM05D000130 ORTHO05D000772 1.5e-08 62.4 59 50.8
CSS0037014 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 2.0e-08 62.0 50 58.0
Ca_10822_v3 Cicer arietinum L. HOM05D000130 ORTHO05D000772 2.0e-08 62.0 55 54.5
Psat6g202760 Pisum sativum HOM05D000130 ORTHO05D000772 2.0e-08 62.0 55 54.5
TPR.G26592 Trifolium pratense HOM05D000130 ORTHO05D000772 2.0e-08 62.0 61 50.8
CiPaw.03G099600 Carya illinoinensis HOM05D000130 ORTHO05D000772 2.6e-08 61.6 68 45.6
COL.COLO4_14222 Corchorus olitorius HOM05D000130 ORTHO05D000772 2.6e-08 61.6 79 46.8
FAN03G1019 Fragaria x ananassa HOM05D000130 ORTHO05D000772 2.6e-08 61.6 59 50.8
FAN03G2696 Fragaria x ananassa HOM05D000130 ORTHO05D000772 2.6e-08 61.6 59 50.8
Eucgr.A02855 Eucalyptus grandis HOM05D000130 ORTHO05D000772 3.4e-08 61.2 58 55.2
QL12p038653 Quercus lobata HOM05D000130 ORTHO05D000772 4.5e-08 60.8 67 52.2
QL12p038758 Quercus lobata HOM05D000130 ORTHO05D000772 5.8e-08 60.5 67 46.3
Eucgr.J01051 Eucalyptus grandis HOM05D000130 ORTHO05D000772 7.6e-08 60.1 68 45.6
Psat0s4061g0160 Pisum sativum HOM05D000130 ORTHO05D000772 7.6e-08 60.1 67 47.8
Prupe.2G286700 Prunus persica HOM05D000130 ORTHO05D000772 7.6e-08 60.1 55 54.5
QL12p038727 Quercus lobata HOM05D000130 ORTHO05D000772 7.6e-08 60.1 67 52.2
Medtr6g464510 Medicago truncatula HOM05D000130 ORTHO05D000772 1.0e-07 59.7 61 50.8
arahy.Tifrunner.gnm1.ann1.NVA2S6 Arachis hypogaea HOM05D000130 ORTHO05D000772 1.3e-07 59.3 60 51.7
Eucgr.A02853 Eucalyptus grandis HOM05D000130 ORTHO05D000772 1.7e-07 58.9 58 51.7
PGR042G2816 Punica granatum HOM05D000130 ORTHO05D000772 1.7e-07 58.9 68 47.1
QL12p038796 Quercus lobata HOM05D000130 ORTHO05D000772 1.7e-07 58.9 67 46.3
Thecc.03G166200 Theobroma cacao HOM05D000130 ORTHO05D000772 2.2e-07 58.5 58 53.4
EL10Ac3g05750 Beta vulgaris HOM05D000130 ORTHO05D000772 2.9e-07 58.2 61 44.3
Glyma.16G200900 Glycine max HOM05D000130 ORTHO05D000772 2.9e-07 58.2 67 50.7
MD06G1052300 Malus domestica HOM05D000130 ORTHO05D000772 3.8e-07 57.8 54 51.9
Psat0s2359g0080 Pisum sativum HOM05D000130 ORTHO05D000772 3.8e-07 57.8 67 47.8
Dinv28512 Davidia involucrata HOM05D000130 ORTHO05D000772 4.9e-07 57.4 60 48.3
Glyma.20G153200 Glycine max HOM05D000130 ORTHO05D000772 4.9e-07 57.4 55 52.7
Manes.06G141100 Manihot esculenta HOM05D000130 ORTHO05D000772 4.9e-07 57.4 62 54.8
VMungo0464G1184 Vigna mungo HOM05D000130 ORTHO05D000772 4.9e-07 57.4 55 52.7
CSS0033626 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 6.5e-07 57.0 50 56.0
Lj5g0016421 Lotus japonicus HOM05D000130 ORTHO05D000772 6.5e-07 57.0 55 49.1
Psat1g105280 Pisum sativum HOM05D000130 ORTHO05D000772 6.5e-07 57.0 67 47.8
Sabra15G0148700 Salix brachista HOM05D000130 ORTHO05D000772 6.5e-07 57.0 69 52.2
CSS0048707 Camellia sinensis var. sinensis HOM05D000130 ORTHO05D000772 8.4e-07 56.6 50 54.0
Dinv28511 Davidia involucrata HOM05D000130 ORTHO05D000772 8.4e-07 56.6 60 48.3
Lalb_Chr02g0140851 Lupinus albus HOM05D000130 ORTHO05D000772 8.4e-07 56.6 55 54.5
Phvul.004G123700 Phaseolus vulgaris HOM05D000130 ORTHO05D000772 8.4e-07 56.6 55 54.5
Phvul.004G123800 Phaseolus vulgaris HOM05D000130 ORTHO05D000772 8.4e-07 56.6 56 53.6
QL12p038778 Quercus lobata HOM05D000130 ORTHO05D000772 8.4e-07 56.6 67 46.3
Duzib084G1043 Durio zibethinus HOM05D000130 ORTHO05D000772 1.1e-06 56.2 62 50.0
Lalb_Chr13g0291621 Lupinus albus HOM05D000130 ORTHO05D000772 1.1e-06 56.2 68 44.1
Medtr1g102170 Medicago truncatula HOM05D000130 ORTHO05D000772 1.1e-06 56.2 55 50.9
Cpa.g.sc4.186 Carica papaya HOM05D000130 ORTHO05D000772 1.4e-06 55.8 61 49.2
Cfa008193 Carpinus fangiana HOM05D000130 ORTHO05D000772 1.9e-06 55.5 85 38.8
Lalb_Chr19g0131181 Lupinus albus HOM05D000130 ORTHO05D000772 1.9e-06 55.5 67 44.8
Potri.015G137100 Populus trichocarpa HOM05D000130 ORTHO05D000772 1.9e-06 55.5 69 52.2
QL12p038740 Quercus lobata HOM05D000130 ORTHO05D000772 1.9e-06 55.5 67 46.3
Actinidia13538 Actinidia chinensis HOM05D000130 ORTHO05D000772 2.5e-06 55.1 50 52.0
Glyma.09G149300 Glycine max HOM05D000130 ORTHO05D000772 2.5e-06 55.1 63 50.8
Psat1g110520 Pisum sativum HOM05D000130 ORTHO05D000772 2.5e-06 55.1 60 48.3
CANSAT56G0956 Cannabis sativa HOM05D000130 ORTHO05D000772 4.2e-06 54.3 56 53.6
Lalb_Chr19g0131191 Lupinus albus HOM05D000130 ORTHO05D000772 4.2e-06 54.3 64 43.8
COL.COLO4_05149 Corchorus olitorius HOM05D000130 ORTHO05D000772 5.5e-06 53.9 60 50.0
Duzib213G0899 Durio zibethinus HOM05D000130 ORTHO05D000772 5.5e-06 53.9 61 49.2
arahy.Tifrunner.gnm1.ann1.UCUY7J Arachis hypogaea HOM05D000130 ORTHO05D000772 7.1e-06 53.5 66 43.9
Eucgr.J01049 Eucalyptus grandis HOM05D000130 ORTHO05D000772 7.1e-06 53.5 65 47.7
Eucgr.J01050 Eucalyptus grandis HOM05D000130 ORTHO05D000772 7.1e-06 53.5 63 42.9
Medtr6g464120 Medicago truncatula HOM05D000130 ORTHO05D000772 7.1e-06 53.5 59 50.8
Sc26g0001120 Simmondsia chinensis HOM05D000130 ORTHO05D000772 7.1e-06 53.5 56 44.6
COL.COLO4_29999 Corchorus olitorius HOM05D000130 ORTHO05D000772 9.3e-06 53.1 57 50.9
Duzib187G0316 Durio zibethinus HOM05D000130 ORTHO05D000772 9.3e-06 53.1 62 48.4
Lj8C33T1 Lonicera japonica HOM05D000130 ORTHO05D000772 9.3e-06 53.1 67 41.8
TWI53G0285 Tripterygium wilfordii HOM05D000130 ORTHO05D000772 9.3e-06 53.1 65 44.6


User provided reference genes

Program Settings