Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 9.7e-46 186.4 92 100.0
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 1.8e-36 155.6 93 81.7
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 2.4e-36 155.2 94 83.0
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 2.9e-34 148.3 93 74.2
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 2.1e-32 142.1 92 78.3
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 2.7e-32 141.7 90 73.3
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 2.7e-32 141.7 93 71.0
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 3.6e-32 141.4 94 76.6
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 9.7e-30 133.3 93 69.9
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 8.2e-29 130.2 91 64.8
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 1.4e-28 129.4 89 64.0
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 7.0e-28 127.1 92 68.5
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 1.6e-27 125.9 92 67.4
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 1.6e-27 125.9 92 66.3
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 2.0e-27 125.6 89 64.0
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.7e-27 125.2 92 65.2
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.3e-26 122.9 92 63.0
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 1.7e-26 122.5 100 60.0
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 5.0e-26 120.9 89 62.9
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 8.5e-26 120.2 92 63.0
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 1.1e-25 119.8 77 70.1
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.5e-25 119.4 92 62.0
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 1.5e-25 119.4 92 64.1
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.9e-25 119.0 91 64.8
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 2.5e-25 118.6 89 59.6
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 5.5e-25 117.5 92 62.0
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 9.4e-25 116.7 92 64.1
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.2e-24 116.3 91 61.5
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 2.1e-24 115.5 89 66.3
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.7e-24 115.2 89 58.4
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.7e-24 115.2 81 64.2
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 2.7e-24 115.2 90 61.1
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 2.7e-24 115.2 90 61.1
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.7e-24 115.2 90 61.1
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.7e-24 115.2 90 61.1
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 2.7e-24 115.2 92 59.8
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 2.7e-24 115.2 92 59.8
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 3.6e-24 114.8 79 65.8
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 3.6e-24 114.8 79 65.8
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 3.6e-24 114.8 79 65.8
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 3.6e-24 114.8 92 62.0
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 4.7e-24 114.4 92 60.9
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 4.7e-24 114.4 92 63.0
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 8.0e-24 113.6 75 70.7
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 1.0e-23 113.2 91 59.3
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 1.4e-23 112.8 79 64.6
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 1.4e-23 112.8 91 60.4
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.8e-23 112.5 92 58.7
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 1.8e-23 112.5 92 60.9
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 1.8e-23 112.5 91 60.4
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 2.3e-23 112.1 76 68.4
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.0e-23 111.7 92 58.7
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.0e-23 111.7 92 58.7
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 4.0e-23 111.3 92 56.5
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 4.0e-23 111.3 75 65.3
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 4.0e-23 111.3 75 64.0
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 5.2e-23 110.9 79 63.3
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 5.2e-23 110.9 92 59.8
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 6.8e-23 110.5 92 59.8
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 8.8e-23 110.2 79 65.8
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 8.8e-23 110.2 92 60.9
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 2.0e-22 109.0 91 58.2
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 2.0e-22 109.0 79 63.3
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 2.0e-22 109.0 79 63.3
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 3.4e-22 108.2 79 60.8
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 3.4e-22 108.2 79 60.8
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 3.4e-22 108.2 92 55.4
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 4.4e-22 107.8 92 60.9
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 4.4e-22 107.8 92 60.9
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 9.8e-22 106.7 90 56.7
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 1.3e-21 106.3 92 57.6
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 1.3e-21 106.3 89 60.7
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.7e-21 105.9 92 56.5
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.7e-21 105.9 97 51.5
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 2.2e-21 105.5 92 58.7
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 2.8e-21 105.1 77 62.3
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.8e-21 105.1 92 58.7
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 6.3e-21 104.0 79 60.8
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 8.3e-21 103.6 92 56.5
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 8.3e-21 103.6 96 55.2
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.1e-20 103.2 77 62.3
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 1.1e-20 103.2 92 58.7
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 1.1e-20 103.2 77 62.3
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 2.4e-20 102.1 92 54.3
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 3.1e-20 101.7 75 64.0
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 3.1e-20 101.7 92 57.6
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 5.4e-20 100.9 92 56.5
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 5.4e-20 100.9 75 60.0
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 7.0e-20 100.5 89 56.2
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 7.0e-20 100.5 92 56.5
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 9.1e-20 100.1 76 59.2
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 9.1e-20 100.1 86 55.8
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 9.1e-20 100.1 76 60.5
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 1.2e-19 99.8 92 55.4
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 2.0e-19 99.0 86 55.8
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.7e-19 98.6 92 54.3
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 2.7e-19 98.6 75 61.3
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 5.9e-19 97.4 76 63.2
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 7.7e-19 97.1 85 51.8
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 1.3e-18 96.3 75 60.0
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 1.3e-18 96.3 78 55.1
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.5e-17 92.8 84 58.3
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.5e-17 92.0 83 57.8
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 3.2e-17 91.7 97 50.5
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 3.2e-17 91.7 69 62.3
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 3.6e-16 88.2 90 51.1
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 6.1e-16 87.4 92 47.8
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 4.0e-15 84.7 76 52.6
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 4.0e-15 84.7 49 73.5
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 5.2e-15 84.3 77 57.1
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 6.8e-15 84.0 65 60.0
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.0e-14 82.4 76 53.9
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.0e-14 82.4 75 54.7
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 9.8e-14 80.1 66 57.6
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.3e-13 79.7 52 69.2
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 1.7e-13 79.3 75 49.3
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 2.8e-13 78.6 99 40.4
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 5.4e-12 74.3 66 50.0
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 9.2e-12 73.6 78 48.7
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 1.6e-11 72.8 75 44.0
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 1.6e-08 62.8 65 43.1
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 1.8e-07 59.3 99 35.4
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.2e-06 56.6 43 58.1
Gohir.D06G091250 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.4e-06 54.7 79 38.0
Gohir.D06G091325 Gossypium hirsutum HOM05D005447 ORTHO05D006730 4.4e-06 54.7 79 38.0
Gorai.010G105200 Gossypium raimondii HOM05D005447 ORTHO05D006730 9.8e-06 53.5 79 38.0


User provided reference genes

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